AX-89850635, AX-89850635 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850635
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88899590
TypeSNP
SNP AllelesT/G
Probe 1AX-89850635.AX-89850635: GGATCCCATCAAAACTGGAGGGATCCCTGG
5' Flanking SequenceACACACCTAGGGTAGTTTTGACCTCCCTAGGGACC
3' Flanking SequenceCCATGACCCACCTAGGGCCACCAAGGGGCTGCATA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
Alignment of Fragaria x ananassa 90K Array SNPs to Fragaria vesca Genome v2.02016-11-22
90K SNP array for the cultivated strawberry Fragaria x ananassa2014-07-23
Sequence
>AX-89850635 ID=AX-89850635; Name=AX-89850635; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
ACACACCTAGGGTAGTTTTGACCTCCCTAGGGACCKCCATGACCCACCTA
GGGCCACCAAGGGGCTGCATA
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:19076271..19076341+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:31324429..31324481+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:5156521..5156591+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb1 chromosome Fvb1:738887..739205+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
LG7 chromosome LG7:18010135..18010135. Fragaria vesca Whole Genome v1.1 Assembly & Annotation