AX-89906731, AX-89906731 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906731
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88899632
TypeSNP
SNP AllelesT/C
Probe 1AX-89906731.AX-89906731: AAACACTAGAGATAAGAAAAATCCGACCCT
5' Flanking SequenceCGAATCTCTATTGCACTTTGCAAAATATCGGATTC
3' Flanking SequenceTCCCAGCCTAAAAAGAATAGAGATCACAAATTGTG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
Alignment of Fragaria x ananassa 90K Array SNPs to Fragaria vesca Genome v2.02016-11-22
90K SNP array for the cultivated strawberry Fragaria x ananassa2014-07-23
Sequence
>AX-89906731 ID=AX-89906731; Name=AX-89906731; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CGAATCTCTATTGCACTTTGCAAAATATCGGATTCYTCCCAGCCTAAAAA
GAATAGAGATCACAAATTGTG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:19146983..19147053+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:20556152..20556207+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:20003804..20003874- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
LG7 chromosome LG7:18080847..18080847. Fragaria vesca Whole Genome v1.1 Assembly & Annotation