AX-89906735, AX-89906735 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89906735
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88899690
TypeSNP
SNP AllelesT/C
Probe 1AX-89906735.AX-89906735: TATGTTCCTATTTGCCCATTGCCTATACTC
5' Flanking SequenceCCCGTATCCGATTCAAAAATCCGAATACTGAAGAT
3' Flanking SequenceCTCATATCCGTTACCCGTTTATCCTTGTATATCTC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89906735 ID=AX-89906735; Name=AX-89906735; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CCCGTATCCGATTCAAAAATCCGAATACTGAAGATYCTCATATCCGTTAC
CCGTTTATCCTTGTATATCTC
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:19229370..19229440+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:9459935..9460005+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:1405078..1405148- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb5 chromosome Fvb5:25353990..25354052- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:4457154..4457224- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-1 chromosome Fvb6-1:10234026..10234089+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:34680761..34680791+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-3 chromosome Fvb5-3:3774167..3774227+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb4-4 chromosome Fvb4-4:15569517..15569587+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-4 chromosome Fvb5-4:6080968..6081031- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:18163234..18163234. Fragaria vesca Whole Genome v1.1 Assembly & Annotation