AX-89850715, AX-89850715 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850715
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88901453
TypeSNP
SNP AllelesC/G
Probe 1AX-89850715.AX-89850715_probe1: TAGAACCCCTACTATCGAAGCCTGGTCGTC
Probe 2AX-89850715.AX-89911941_probe2: TAGAACCCCTACTATCGAAGCCTGGTCGTG
5' Flanking SequenceTGATGAATCTTGGGGATGATAGCTTCGGACCAGCA
3' Flanking SequenceGCCTATATTTTCCAAAAGTGGAAATTCTAGAGCTA
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850715 ID=AX-89850715; Name=AX-89850715; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
TGATGAATCTTGGGGATGATAGCTTCGGACCAGCASGCCTATATTTTCCA
AAAGTGGAAATTCTAGAGCTA
Alignments
Feature NameTypeLocationAnalysis
Fvb5 chromosome Fvb5:3101784..3101847+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:2931484..2931554+ Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7 chromosome Fvb7:22030472..22030542- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6 chromosome Fvb6:38347900..38347934- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb4 chromosome Fvb4:4891718..4891781- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb3 chromosome Fvb3:2728718..2728777- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb6-2 chromosome Fvb6-2:27902073..27902107+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb6-1 chromosome Fvb6-1:1044619..1044653+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:26913371..26913444+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-2 chromosome Fvb3-2:1172467..1172537+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-2 chromosome Fvb3-2:1149119..1149189+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-1 chromosome Fvb3-1:29432721..29432786+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:32008258..32008328- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:32004495..32004565- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:31999582..31999652- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:31966054..31966124- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:28294582..28294652- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:28264654..28264724- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:28271438..28271503- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb5-1 chromosome Fvb5-1:2342184..2342247- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-4 chromosome Fvb3-4:26683382..26683441- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb3-3 chromosome Fvb3-3:791282..791352- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:20883109..20883109. Fragaria vesca Whole Genome v1.1 Assembly & Annotation