AX-89850724, AX-89850724 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850724
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88901678
TypeSNP
SNP AllelesC/G
Probe 1AX-89850724.AX-89850724_probe1: TCTAGTTGGTCAACCTGATCAAGCAGGTAC
Probe 2AX-89850724.AX-89863023_probe2: TCTAGTTGGTCAACCTGATCAAGCAGGTAG
5' Flanking SequenceCTATCAAGATCAACCAGTTGGACTAGTTCGTCCAT
3' Flanking SequenceAACTCATATTCTAGTGGTAAGAATCACTCTCCATG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850724 ID=AX-89850724; Name=AX-89850724; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTATCAAGATCAACCAGTTGGACTAGTTCGTCCATSAACTCATATTCTAG
TGGTAAGAATCACTCTCCATG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:21730337..21730407- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:1732930..1733000+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:31669075..31669145- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:27982763..27982833- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:30758499..30758569- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:29191882..29191952- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:21183244..21183244. Fragaria vesca Whole Genome v1.1 Assembly & Annotation