AX-89850725, AX-89850725 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850725
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88901703
TypeSNP
SNP AllelesC/G
Probe 1AX-89850725.AX-89850725_probe1: GTCTGGACTAGACAAAGGAAACAGCCCGAC
Probe 2AX-89850725.AX-89860570_probe2: GTCTGGACTAGACAAAGGAAACAGCCCGAG
5' Flanking SequenceAAACCACAGACCTGATCTGTTTCCTTTGTCGGGCT
3' Flanking SequenceCATATAATCCTTTGATTGAATCTCTGAAGTGCTAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850725 ID=AX-89850725; Name=AX-89850725; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
AAACCACAGACCTGATCTGTTTCCTTTGTCGGGCTSCATATAATCCTTTG
ATTGAATCTCTGAAGTGCTAG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:21664795..21664865- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:1920694..1920764+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:2777270..2777329+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:21913..21972+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:27899000..27899070- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:31604354..31604424- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:30718620..30718690- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:21248786..21248786. Fragaria vesca Whole Genome v1.1 Assembly & Annotation