AX-89850727, AX-89850727 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850727
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88901734
TypeSNP
SNP AllelesA/T
Probe 1AX-89850727.AX-89850727_probe1: AAGTCTGACGACAACCCTTGGTTTTTAAAA
Probe 2AX-89850727.AX-89914501_probe2: AAGTCTGACGACAACCCTTGGTTTTTAAAT
5' Flanking SequenceCTCCTCTTCAGACTGCTGTTGGGAACCAAAAATTT
3' Flanking SequenceGTTAAAGAAGCACCACGTATCAAAACACTGGTAAG
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850727 ID=AX-89850727; Name=AX-89850727; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
CTCCTCTTCAGACTGCTGTTGGGAACCAAAAATTTWGTTAAAGAAGCACC
ACGTATCAAAACACTGGTAAG
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:21643928..21643998- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-4 chromosome Fvb7-4:1940487..1940557+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:2802656..2802726+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:27877323..27877393- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:31583367..31583437- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:30694375..30694445- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:29127329..29127399- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:21269653..21269653. Fragaria vesca Whole Genome v1.1 Assembly & Annotation