AX-89850735, AX-89850735 (genetic_marker) Fragaria x ananassa

Marker Overview
NameAX-89850735
dbSNP IDN/A
SNP Array ID
90K SNP array for cultivated strawberry:Affx-88902067
TypeSNP
SNP AllelesC/G
Probe 1AX-89850735.AX-89850735_probe1: TCCGAAAACAAAACTCGAACAGAGGACGAC
Probe 2AX-89850735.AX-89860446_probe2: TCCGAAAACAAAACTCGAACAGAGGACGAG
5' Flanking SequenceGGCTTGAGGCTTTTGTTTTGAGCTTGTCTCCTGCT
3' Flanking SequenceAGTTGCTTCTTGGGGAGCCGCTTTCAAAGCAAACC
SpeciesFragaria x ananassa
Publication[view all]
ContactNahla Bassil
CommentSNP-SNP (haploSNP)
Contact
NameDetails
Nahla Bassil
First name:Nahla
Last name:Bassil
Title:Geneticist
Institution:USDA-ARS, NCGR, Corvallis, OR, USA
Address:USDA-ARS, NCGR, Corvallis, OR, USA
Country:USA
Email:nahla.bassil@ars.usda.gov
Phone:(541) 738-4214
Libraries
Library NameType
90K SNP array for cultivated strawberrySNP_chip
Sequence
>AX-89850735 ID=AX-89850735; Name=AX-89850735; organism=Fragaria x ananassa; type=genetic_marker; length=71bp
GGCTTGAGGCTTTTGTTTTGAGCTTGTCTCCTGCTSAGTTGCTTCTTGGG
GAGCCGCTTTCAAAGCAAACC
Alignments
Feature NameTypeLocationAnalysis
Fvb7 chromosome Fvb7:21130279..21130349- Fragaria vesca Whole Genome v2.0.a1 Assembly & Annotation
Fvb7-3 chromosome Fvb7-3:3257283..3257353+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-3 chromosome Fvb7-3:427798..427868+ Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:31081159..31081229- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-2 chromosome Fvb7-2:27403440..27403510- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
Fvb7-1 chromosome Fvb7-1:28468482..28468552- Fragaria x ananassa Camarosa Genome Assembly v1.0 & Annotation v1.0.a1
LG7 chromosome LG7:21783302..21783302. Fragaria vesca Whole Genome v1.1 Assembly & Annotation