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Marker Overview
Name | JPsnpHou00098 |
dbSNP ID | N/A |
Type | SNP |
SNP Alleles | A/G |
5' Flanking Sequence | CAAACAAAAATACAGAACTATATACATAAGAAGCCGAAGAAATGACTGATTAACTGCAGG
ACATGAAGATGAACGACTGTCGAAGCTTTTCAATAAACAAGAAATTAAGCTACATACATA
CAATACTGCATATTTGCTGCATACATTACACGGTTTAAAGTTGAGAGAAATTAATGGATT
TGGATGGATGGTTGGTTGGCCCTTTTGTTTGGATGATCACCATTTCCAGAAAACGTTGGA
ACCACACTTGTACTTGTCCTTGCCTTCGCACTCCAAACTAAGATCGTCAGAGAGAAATGG
TACTTTCTTTTGCTTGGCAAGATCTTGGCAGCCAGTGAAGTTCTCAGGGAACTTACATGA
TCCAAATTGAACAGTGAATGCTCTTGCAAAGTTTGCACCGCTCGTTGCCAGCCTCTTCTT
CTCATTCAGTTCCTTGTTGGCTTTGCTTTTTTCGAGGTAATCATCAATGACACCGGCATT
GGCAGCGATGAACTCTAGTGTGCTGGCATGCAACTATGCCGTCTCCGGCACCAGAATGTC
TGAACTTGTCAATGCAAAGACGACTTGCATGCCTTCAGTTGTATCAGCTGCTCAGACCAA
AGTTGTAGCACTCAGGGCCCAACAACCAAGCACACAAAATAATCAAGGAGCTGATGGAAG
AAGGGCTGTGCTGCTCTCCCTGGCGGCCATTGCTTTCACCGCTGTTTCTTCCAACTCCGC
TGCCAATGCCGGTGTCATTGATGATTACCTCGAAAAAAGCAAAGCCAACAAGGAACTGAA
TGACAAGAAGAGGCTGGCAACGAGCGGTGCAAACTTTGCAAGAGCATTCACTGTTCAATT
TGGATCATGTAAGTTCCCTGAGAACTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGAA
AGTACCATTTCTCTCTGACGATCTTAGTTTGGAGTGCGAAGGCAAGGACAA |
3' Flanking Sequence | TACAAGTGTGGTTCCAACGTTTTCTGGAAATGGTGATCATCCAAACAAAAGGGnCAACCA
AnCATCCATCCAAATCCATTAATTTCTCTCAACTTTAAACCGTGTAATGTATGCAGCAAA
TATGCAGTATTGTATGTATGTAGCTTAATTTCTTGTTTATTGAAAAGCTTCGACAGTCGT
TCATCTTCATGTCCTGCAGTTAATCAGTCATTTCTTCGGCTTCTTATGTATATAGTTCTG
TATTTTTGTTTGAACTCTTGGCATCTTGAAAGATAGAAGAACTGGATATACAAAAAAAAA
AAAC |
Species | Pyrus pyrifolia |
Publication | [view all] |
Contact | Toshiya Yamamoto
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Comment | SNP position in sequence: 952 |
Publications
Year | Publication |
2014 | Terakami S, Nishitani C, Kunihisa M, Shirasawa K, Sato S, Tabata S, Kurita K, Kanamori H, Katayose Y, Takada N, Saito T, Yamamoto T. Transcriptome-based single nucleotide polymorphism markers for genome mapping in Japanese pear (Pyrus pyrifolia Nakai). Tree genetics & genomes. 2014; 10(4):853-863. |
Sequence
>JPsnpHou00098 ID=JPsnpHou00098; Name=JPsnpHou00098; organism=Pyrus pyrifolia; type=genetic_marker; length=1256bp CAAACAAAAATACAGAACTATATACATAAGAAGCCGAAGAAATGACTGAT TAACTGCAGGACATGAAGATGAACGACTGTCGAAGCTTTTCAATAAACAA GAAATTAAGCTACATACATACAATACTGCATATTTGCTGCATACATTACA CGGTTTAAAGTTGAGAGAAATTAATGGATTTGGATGGATGGTTGGTTGGC CCTTTTGTTTGGATGATCACCATTTCCAGAAAACGTTGGAACCACACTTG TACTTGTCCTTGCCTTCGCACTCCAAACTAAGATCGTCAGAGAGAAATGG TACTTTCTTTTGCTTGGCAAGATCTTGGCAGCCAGTGAAGTTCTCAGGGA ACTTACATGATCCAAATTGAACAGTGAATGCTCTTGCAAAGTTTGCACCG CTCGTTGCCAGCCTCTTCTTCTCATTCAGTTCCTTGTTGGCTTTGCTTTT TTCGAGGTAATCATCAATGACACCGGCATTGGCAGCGATGAACTCTAGTG TGCTGGCATGCAACTATGCCGTCTCCGGCACCAGAATGTCTGAACTTGTC AATGCAAAGACGACTTGCATGCCTTCAGTTGTATCAGCTGCTCAGACCAA AGTTGTAGCACTCAGGGCCCAACAACCAAGCACACAAAATAATCAAGGAG CTGATGGAAGAAGGGCTGTGCTGCTCTCCCTGGCGGCCATTGCTTTCACC GCTGTTTCTTCCAACTCCGCTGCCAATGCCGGTGTCATTGATGATTACCT CGAAAAAAGCAAAGCCAACAAGGAACTGAATGACAAGAAGAGGCTGGCAA CGAGCGGTGCAAACTTTGCAAGAGCATTCACTGTTCAATTTGGATCATGT AAGTTCCCTGAGAACTTCACTGGCTGCCAAGATCTTGCCAAGCAAAAGAA AGTACCATTTCTCTCTGACGATCTTAGTTTGGAGTGCGAAGGCAAGGACA ArTACAAGTGTGGTTCCAACGTTTTCTGGAAATGGTGATCATCCAAACAA AAGGGnCAACCAAnCATCCATCCAAATCCATTAATTTCTCTCAACTTTAA ACCGTGTAATGTATGCAGCAAATATGCAGTATTGTATGTATGTAGCTTAA TTTCTTGTTTATTGAAAAGCTTCGACAGTCGTTCATCTTCATGTCCTGCA GTTAATCAGTCATTTCTTCGGCTTCTTATGTATATAGTTCTGTATTTTTG TTTGAACTCTTGGCATCTTGAAAGATAGAAGAACTGGATATACAAAAAAA AAAAAC
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