Sciros | GDR

Germplasm Overview


Name	Sciros
Alias	Pacific Rose [view all 2]
GRIN ID	N/A
Type	Cultivar
Species	Malus x domestica
Description	N/A
Origin Country	N/A
Origin Detail	N/A
Pedigree	Gala x Splendour
Maternal Parent	Gala
Paternal Parent	Splendour
Maternal Parent of	WSU101 [view all 36]
Paternal Parent of	WSU79 [view all 6]
Phenotypic Data	[view all 836]
SSR Genotype Data	[view all 14]
SNP Genotype Data	[view all 3855]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Chagné D, Kirk C, How N, Whitworth C, Fontic C, Reig G, Sawyer G, Rouse S, Poles L, Gardiner SE, Kumar S, Espley R, Volz RK, Troggio M, Iglesias I. A functional genetic marker for apple red skin coloration across different environments. Tree Genetics & Genomes . 2016; 12:67.

Alias


Synonym
Pacific Rose
Pacrose

Qtl

Total 7 records


#	Name	Dataset
1	qFRCL.RG-LG9.2016	Apple-red_skin_coloration-Chagne-2016
2	qFRCL.NZST51-LG9.2016.1	Apple-red_skin_coloration-Chagne-2016
3	qFRCL.F-LG9.2016	Apple-red_skin_coloration-Chagne-2016
4	qFRCL.NZST51-LG9.2016.2	Apple-red_skin_coloration-Chagne-2016
5	qFRCL.S-LG9.2016	Apple-red_skin_coloration-Chagne-2016
6	qFRCL.PA153-LG9.2016	Apple-red_skin_coloration-Chagne-2016
7	qFRCL.NZST51-LG9.2016.3	Apple-red_skin_coloration-Chagne-2016

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Ssr Genotype Data

Total 14 records

Download Table

#	Dataset	Marker	Marker Type	Genotype	Marker_Allele
1	Apple_CRS_genotyping_SSR_2010	CH05c06	genetic_marker	104\|118	CH05c06_104; CH05c06_118
2	Apple_CRS_genotyping_SSR_2010	Hi04e04	genetic_marker	246\|246	Hi04e04_246; Hi04e04_246
3	Apple_CRS_genotyping_SSR_2010	Md-Exp7	genetic_marker	202\|202	Md-Exp7_202; Md-Exp7_202
4	Apple_KE_genotyping_SSR_2010	ACO1	genetic_marker	1\|2	ACO1_1; ACO1_2
5	Apple_KE_genotyping_SSR_2010	ACS1	genetic_marker	2\|2	ACS1_2; ACS1_2
6	Apple_KE_genotyping_SSR_2010	CH02b03	genetic_marker	107\|79	CH02b03_107; CH02b03_79
7	Apple_KE_genotyping_SSR_2010	CH05c06	genetic_marker	104\|118	CH05c06_104; CH05c06_118
8	Apple_KE_genotyping_SSR_2010	Hi01b01	genetic_marker	162\|189	Hi01b01_162; Hi01b01_189
9	Apple_KE_genotyping_SSR_2010	Hi04e04	genetic_marker	246\|246	Hi04e04_246; Hi04e04_246
10	Apple_KE_genotyping_SSR_2010	Hi22d06	genetic_marker	129\|132	Hi22d06_129; Hi22d06_132
11	Apple_KE_genotyping_SSR_2010	Md-Exp2	genetic_marker	295\|450	Md-Exp2_295; Md-Exp2_450
12	Apple_KE_genotyping_SSR_2010	Md-Exp7	genetic_marker	202\|202	Md-Exp7_202; Md-Exp7_202
13	Apple_KE_genotyping_SSR_2010	Md-PG1-ssr	genetic_marker	169\|188	Md-PG1-ssr_169; Md-PG1-ssr_188
14	Apple_KE_genotyping_SSR_2010	Md-PG2	genetic_marker	359\|363	Md-PG2_359; Md-PG2_363

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Publications


Year	Publication
2016	Chagné D, Kirk C, How N, Whitworth C, Fontic C, Reig G, Sawyer G, Rouse S, Poles L, Gardiner SE, Kumar S, Espley R, Volz RK, Troggio M, Iglesias I. A functional genetic marker for apple red skin coloration across different environments. Tree Genetics & Genomes . 2016; 12:67.

Snp Genotype Data

Total 3,855 records

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#	Dataset	Marker Name	Allele	Genotype
1	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00116	T/C	B\|B
2	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00124	T/G	B\|B
3	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00125	A/C	A\|B
4	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00128	R	B\|B
5	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00134	T/C	A\|A
6	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00136	A/C	B\|B
7	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00140	T/G	B\|B
8	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00148	A/G	B\|B
9	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00152	T/C	A\|A
10	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00157	T/C	B\|B
11	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00164	A/G	A\|B
12	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00167	T/C	A\|A
13	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00169	T/C	A\|A
14	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00170	T/C	A\|A
15	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00174	T/C	B\|B
16	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00175	T/C	A\|B
17	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00176	R	B\|B
18	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00179	T/C	B\|B
19	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00181	T/G	A\|A
20	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00183	T/C	A\|B
21	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00194	T/C	A\|B
22	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00203	T/C	A\|B
23	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00212	T/C	A\|B
24	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00213	T/C	B\|B
25	RosBREED_Apple_CRS_SNP_Genotype_2020	GDsnp00214	T/G	A\|A

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Cross References

External references for this accession


Database	Accession
Fruit and Nut Cultivars Database	12228

Maternal Parent Of

Phenotypic Data

Total 836 trait scores

Download Table

#	Dataset	Descriptor	Value
1	Apple_CRS_phenotyping_2010	E2_N_0	110.0490028788
2	Apple_CRS_phenotyping_2010	E2_N_10	88.1859936165
3	Apple_CRS_phenotyping_2010	Firm_0	3
4	Apple_CRS_phenotyping_2010	Firm_10	2.5
5	Apple_CRS_phenotyping_2010	Grease_0	1
6	Apple_CRS_phenotyping_2010	Grease_10	1
7	Apple_CRS_phenotyping_2010	GrndCol_0	3
8	Apple_CRS_phenotyping_2010	IntBrown_0	1
9	Apple_CRS_phenotyping_2010	IntBrown_10	1
10	Apple_CRS_phenotyping_2010	Juice_0	3.5
11	Apple_CRS_phenotyping_2010	Juice_10	2.5
12	Apple_CRS_phenotyping_2010	Location	3
13	Apple_CRS_phenotyping_2010	M1_N_0	71.616368082
14	Apple_CRS_phenotyping_2010	M1_N_10	65.9671266246
15	Apple_CRS_phenotyping_2010	M2_N_0	113.46523708296
16	Apple_CRS_phenotyping_2010	M2_N_10	89.47152966468
17	Apple_CRS_phenotyping_2010	Mass_g_0	266.25872119
18	Apple_CRS_phenotyping_2010	Mass_g_10	218.63152234
19	Apple_CRS_phenotyping_2010	Maturity_0	2
20	Apple_CRS_phenotyping_2010	Maturity_10	2
21	Apple_CRS_phenotyping_2010	OAH_N_0	76.14465769116
22	Apple_CRS_phenotyping_2010	OAH_N_10	64.89510521418
23	Apple_CRS_phenotyping_2010	OMH_N_0	113.46523708296
24	Apple_CRS_phenotyping_2010	OMH_N_10	89.47152966468
25	Apple_CRS_phenotyping_2010	OvrColType_0	4

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Paternal Parent Of

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