Shawnee

Germplasm Overview
NameShawnee
AliasN/A
Institutional NameShawnee
Sample NameEY0052653_CLT2_CLT2_snapper_rubus.cel
GRIN IDPI 553321
TypeCultivar
SpeciesRubus hybrid
DescriptionN/A
Origin CountryN/A
Origin DetailN/A
PedigreeN/A
Maternal ParentN/A
Paternal ParentN/A
Maternal Parent ofN/A
Paternal Parent ofN/A
Phenotypic Data[view all 6]
SSR Genotype Data[view all 3]
SNP Genotype Data[view all 3233]
MapN/A
DNA LibraryN/A
SequenceN/A
CommentsN/A
ReferenceMontanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications.. G3 (Bethesda, Md.). 2023 Aug 11.
Ssr Genotype Data
Total 3 records
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# Dataset Marker Marker Type Genotype Marker_Allele
1Apple_SSR_Genotype_Volk_2020CH01f02genetic_marker180|206CH01f02_180; CH01f02_206
2Apple_SSR_Genotype_Volk_2020GD162genetic_marker218|238GD162_218; GD162_238
3Apple_SSR_Genotype_Volk_2020GD96genetic_marker181|185GD96_181; GD96_185
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Publications
YearPublication
2023Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications. G3 (Bethesda, Md.). 2023 Aug 11. DOI: 10.1093/g3journal/jkad170
Snp Genotype Data
Total 3,233 records
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#DatasetMarker NameAlleleGenotype
1Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-115251414Y4
2Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-159144814Y2
3Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-184752440M4
4Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096555R3
5Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096558Y2
6Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096559M4
7Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096590K1
8Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096612R1
9Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096631R4
10Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096671R4
11Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096688M2
12Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096693K2
13Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096707M2
14Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096733R4
15Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096814M2
16Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096835R1
17Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096915S2
18Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096922Y2
19Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096983R4
20Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566096987K4
21Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097007Y4
22Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097013Y4
23Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097056R3
24Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097063K1
25Rubus-SNP array validation panel-Montanari-2023-4xRub_AX-566097094R1
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Cross References
External references for this accession
DatabaseAccession
GRINPI 553321
Phenotypic Data
Phenotypic Data
Total 6 trait scores
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# Dataset Descriptor Value
11995_Thompson_CountCHROMOCOUNT28
21995_Thompson_CountCHROMOCOUNT28
31995_Thompson_CountPLOIDYEQUA2n = 4x = 28
41995_Thompson_CountPLOIDYEQUA2n = 4x = 28
5RUBUS.CORVALLIS.STDTYPEb
6RUBUS.CORVALLIS.STDTYPEb
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