Skeena | GDR

Germplasm Overview


Name	Skeena
Alias	N/A
Institutional Name	Skeena
Sample Name	EY0052972_CLT2_CLT2_snapper_rubus.cel
GRIN ID	PI 553374
Type	Cultivar
Species	Rubus idaeus
Description	Skeena
Origin Country	N/A
Origin Detail	N/A
Pedigree	N/A
Maternal Parent	N/A
Paternal Parent	N/A
Maternal Parent of	N/A
Paternal Parent of	N/A
Phenotypic Data	[view all 36]
SSR Genotype Data	N/A
SNP Genotype Data	[view all 12240]
Map	N/A
DNA Library	N/A
Sequence	N/A
Comments	N/A
Reference	Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications.. G3 (Bethesda, Md.). 2023 Aug 11.

Publications


Year	Publication
2023	Montanari S, Deng C, Koot E, Bassil NV, Zurn JD, Morrison-Whittle P, Worthington ML, Aryal R, Ashrafi H, Pradelles J, Wellenreuther M, Chagné D. A multiplexed plant-animal SNP array for selective breeding and species conservation applications. G3 (Bethesda, Md.). 2023 Aug 11. DOI: 10.1093/g3journal/jkad170

Snp Genotype Data

Total 12,240 records

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#	Dataset	Marker Name	Allele	Genotype
1	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-115251414	Y	T\|C
2	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-159144814	Y	C\|C
3	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-159212454	R	A\|G
4	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-166513670	Y	T\|T
5	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-184403348	R	A\|A
6	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-184752440	M	C\|C
7	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-208713277	Y	C\|C
8	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-226069626	R	G\|G
9	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096548	R	A\|A
10	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096550	R	A\|G
11	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096555	R	G\|G
12	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096558	Y	T\|T
13	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096559	M	C\|C
14	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096560	R	G\|G
15	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096584	Y	T\|C
16	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096589	R	A\|A
17	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096590	K	G\|G
18	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096592	Y	T\|T
19	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096597	Y	C\|C
20	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096602	R	A\|G
21	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096606	R	A\|A
22	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096610	R	G\|G
23	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096611	R	G\|G
24	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096612	R	A\|A
25	Rubus-SNP array validation panel-Montanari-2023	Rub_AX-566096618	R	G\|G

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Cross References

External references for this accession


Database	Accession
GRIN	PI 553374

Phenotypic Data

Total 36 trait scores

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#	Dataset	Descriptor	Value
1	RUBUS.CALIFORNIA.90	BOTRYTIS	1
2	RUBUS.CALIFORNIA.90	BOTRYTIS	1
3	RUBUS.CALIFORNIA.90	LEAFRUST	3
4	RUBUS.CALIFORNIA.90	LEAFRUST	3
5	RUBUS.CORE.1998	CORE	0
6	RUBUS.CORE.1998	CORE	0
7	RUBUS.CORVALLIS.86	BLOOM1	124
8	RUBUS.CORVALLIS.86	BLOOM1	124
9	RUBUS.CORVALLIS.86	RIPE1	162
10	RUBUS.CORVALLIS.86	RIPE1	162
11	RUBUS.CORVALLIS.87	BLOOM1	113
12	RUBUS.CORVALLIS.87	BLOOM1	113
13	RUBUS.CORVALLIS.87	FLOWERDENS	7
14	RUBUS.CORVALLIS.87	FLOWERDENS	7
15	RUBUS.CORVALLIS.87	FRUITSIZE	1.6
16	RUBUS.CORVALLIS.87	FRUITSIZE	1.6
17	RUBUS.CORVALLIS.87	FULLBLOOM	128
18	RUBUS.CORVALLIS.87	FULLBLOOM	128
19	RUBUS.CORVALLIS.87	RIPE1	178
20	RUBUS.CORVALLIS.87	RIPE1	178
21	RUBUS.CORVALLIS.STD	FLAVOR	5
22	RUBUS.CORVALLIS.STD	FLAVOR	5
23	RUBUS.CORVALLIS.STD	FRUITCOLOR	dr
24	RUBUS.CORVALLIS.STD	FRUITCOLOR	dr
25	RUBUS.CORVALLIS.STD	LEAFLETNUM	3

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