Pav-HB-01-44

Haplotype Block Overview
Name Pav-HB-01-44
Species Prunus avium
Stock Haplotype [view all 517]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Summit 16 2
Lambert 3 4
Regina 10 12
Ambrunes 7 8
Lapins 11 3
Stella 3 4
Sweetheart 2 3
Van 11 2
Schneiders 10 12
Bing 10 4
Rainier 10 11
5.18.25-001 10 3
5.3.1-001 10 2
5.3.1-002 10 11
Benton 3 5
Brooks 11 12
Cashmere 3 5
Chelan 4 6
Chinook 3 4
Cowiche 3 4
Gil Peck 3 4
Glacier 12 3
Kiona 12 3
Mildew Immune Mazzard #17 14 5
Mildew Immune Mazzard #23 15 5
Newstar 2 3
NY 54 12 6
PMR-1 3 4
Sato Nashiki 16 2
Schmidt 2 21
Selah 10 4
Tieton 12 4
Ulster 3 4
Vic 2 4
Windsor 11 6
23_1_47 12 2
23_2_46 2 6
23_3_24 12 3
23_3_28 2 6
23_3_40 3 6
23_5_17 12 2
23_8_24 12 2
23_8_45 12 2
4.10.19-001 11 12
4.10.19-002 3 4
4.10.19-003 11 12
4.10.19-004 11 12
4.10.19-005 10 3
4.10.19-006 12 3
4.10.19-008 3 4
4.10.19-009 3 4
4.10.19-010 12 3
4.10.19-011 11 4
4.10.2-001 3 7
4.10.2-002 3 8
4.10.2-004 11 8
4.10.2-005 3 7
4.10.2-006 11 7
4.10.2-008 3
4.10.2-009 3 8
4.10.2-010 3 8
4.10.5-001 11 6
4.10.5-002 3 6
4.10.5-003 3 4
4.10.5-004 3 4
4.10.5-005 11 6
4.10.5-006 3 4
4.10.5-015 3
4.10.5-016 11 4
4.10.5-018 3 4
4.10.5-019 11 4
4.10.5-020 3 4
4.10.5-028 3 6
4.10.5-029 3 6
4.10.5-030 10 11
4.16.2-001 4 8
4.18.15-001 10 11
4.18.15-002 10 11
4.18.15-003 10 11
4.18.15-004 11 12
4.18.15-005 10 3
4.18.15-006 11 12
4.18.15-007 3 4
4.18.15-009 12 3
4.18.15-011 10 3
4.18.15-012 10 3
4.18.15-013 12 3
4.18.15-014 12 3
4.18.15-015 11 12
4.18.15-016 11 12
4.18.15-028 10 3
4.18.15-030 11 12
4.18.15-039 10 11
4.18.15-040 3
4.18.15-043 10 11
4.18.2-005 3 8
4.18.2-007 3 8
4.18.2-008 3 7
4.18.2-010 3 7
4.18.2-015 3 8
4.18.2-016 11 8
4.18.2-018 3 7
4.18.2-019 3 7
4.18.2-020 11 7
4.18.2-024 3 7
4.18.2-027 11 8
4.18.2-028 3 7
5.12.5-005 3 6
5.12.5-007 3 6
5.12.5-008 12 6
5.12.5-009 12 4
5.12.5-010 3 6
5.12.5-011 3 4
5.12.5-019 3
5.12.5-020 12 6
5.12.5-021 3 4
5.12.5-022 3 6
5.14.15-003 11 12
5.14.15-004 10
5.14.15-005 11 12
5.14.15-006 10 12
5.14.15-007 10
5.14.15-013 10 11
5.14.15-014 10
5.14.15-015 10
5.14.15-016 10
5.14.15-017 10 12
5.14.15-018 11 12
5.14.15-019 11 12
5.14.15-020 10 11
5.14.23-003 10 3
5.14.23-004 11 3
5.14.23-006 11 5
5.23.15-001 3
5.23.15-002 10 3
5.23.2-001 3 7
5.23.2-002 5 8
5.23.2-003 3 8
5.28.15-001 12 3
5.28.15-002 10
5.28.15-003 12 4
5.28.15-004 12 3
5.28.15-005 10 3
5.28.15-006 12 4
5.28.15-007 10 3
5.28.15-008 10 4
5.28.15-009 10 3
5.28.15-010 10 3
5.28.15-011 12 3
5.28.15-012 12 3
5.28.15-013 12 4
5.28.37-001 2 4
5.28.37-002 2 4
5.28.37-003 2 4
5.28.37-004 16
5.28.37-005 2 4
5.28.37-008 2 3
5.28.37-009 2 3
5.28.37-010 2 4
5.28.37-011 2 3
5.28.37-012 10 11
5.4.15-004 10
5.4.15-005 10
6.14.2-006 11 7
6.14.2-007 10 8
6.14.2-008 11 7
6.14.2-009 10 6
6.14.2-010 11 7
6.14.2-011 10 7
6.14.2-012 10 7
6.14.2-013 11 6
6.14.2-015 10 8
6.29.49-001 11 5
6.29.49-002 11 5
6.29.49-003 3 5
6.29.49-005 3 5
6.29.49-007 11 5
6.29.49-008 3 5
6.30.49-009 10 5
6.30.49-011 3 5
6.30.49-012 14 3
6.30.49-013 10 5
6.30.49-014 3 5
6.30.49-015 3 5
6.30.49-016 10 5
6.30.49-017 10 5
6.31.49-003 10
6.31.49-004 10 5
6.31.49-005 10 14
6.31.49-006 4 5
6.31.49-007 4 5
6.31.49-009 10 14
6.31.49-010 10 5
6.31.49-011 4 5
6.31.49-012 10
6.31.49-013 10 5
6.31.49-014 10 5
6.31.49-015 10 5
6.32.49-032 3 5
6.32.49-033 3 5
6.32.49-034 3 5
6.32.49-035 14 3
6.32.49-037 14 3
6.32.49-038 3 5
6.32.49-039 14 3
6.32.49-040 3 5
6.32.49-041 3 5
6.33.49-001 3 5
6.33.49-002 14 3
6.33.49-003 10 5
6.33.49-004 10 5
23-01-11 12 3
23-02-34 2 6
23-03-13 2 6
23-03-23 3 6
23-03-48 12 3
23-03-56 12 3
23-06-04 12 3
23-06-23 2 6
23-07-26 12 2
23-08-55 2 6
Dzherlo 2 6
Olympus 11 3
PC 7146-16 4 6
Kordia 10 2
Cristobalina 13
Vittoria 18 5
FR20T047 4 6
FR13T004 11 2
FR13T071 19 4
FR31T121 11 18
FR32T087 10 2
FR32T088 10 9
FR32T093 10 2
FR20T045 10 4
FR26T117 10 3
FR29T115 11 5
PC 9816-005 10 4
PC 9816-023 10 3
PC 9816-041 11 4
PC 9816-059 11 3
PC 9816-083 10 3
PC 9816-103 10 3
PC 9816-105 10 4
PC 9816-106 11 3
PC 9816-112 10 3
PC 9816-078 2 3
PC 9819-005 11 3
PC 9819-031 2 3
PC 9819-038 2 4
PC 9814-025 4
PC 9814-078 4
PC 9814-103 4
PC 9814-105 10 3
PC 9814-026 3 4
PC 9814-028 10 4
PC 9814-055 10 3
PC 9814-062 10 4
PC 9814-063 10 3
PC 9814-068 10 3
PC 9814-071 3 4
PC 9814-076 10 3
PC 9819-034 10 3
PC 9816-042 10 4
Emperor Francis 2 3
Black Republican 10 2
Krupnoplodnaya 10 6
Early Burlat 12 5
Venus 11 2
Moreau 5 6
Index 10 4
Sunburst 2 3
6.14.6-008 10 8
FR02T062 11 7
FR02T063 11 7
5.14.23.001 11 3
6.16.44-005 4 5
6.23.44-001 3 5
6.23.44-002 3 5
6.23.55-006 3 5
6.23.55-010 5
6.23.6-002 3 5
6.23.6-003 3
6.16.44-001 10 2
6.16.44-002 2 4
6.16.44-003 4 9
6.28.44-001 2 4
6.28.44-002 2 3
6.4.44-003 10 2
6.4.44-004 10 9
6.4.44-006 2
6.4.44-007 4 9
6.4.44-009 10 9
6.4.44-010 10 2
6.4.45-001 2 4
4.3.1-004 10 4
4.3.1-009 2 4
5.3.1-008 10 4
5.3.1-010 2 4
5.3.1-015 10 2
5.3.1-016 10
5.3.1-017 2 4
6.30.50-002 3
6.14.6-003 11 6
6.28.45-001 4
FR09T089 3 4
6.12.45-001 12 13
6.12.45-002 12 13
6.12.45-003 13 3
6.12.45-004 12 13
6.12.45-005 13 3
6.12.45-007 12 13
6.12.45-008 13
6.12.45-009 13 3
6.12.45-010 13 3
6.14.45-001 11 13
6.14.45-003 10 13
6.14.45-004 11 13
6.14.45-005 10 13
6.14.45-006 11 13
6.14.45-007 10 13
6.14.45-008 11 13
6.14.45-009 10 13
6.28.45-002 13 4
6.14.6-001 10 6
6.14.6-002 10 6
6.14.6-004 11 6
6.14.6-005 11 2
6.14.6-006 10 2
6.14.6-007 10 2
6.14.6-010 10 2
6.23.6-004 5 6
6.23.6-005 2 5
6.23.6-007 2 5
6.23.6-008 3 6
6.23.6-012 5 6
6.28.44-005 10 3
6.28.55-006 4
6.28.55-007 3 4
6.23.6-001 4 5
6.23.6-006 3
6.23.6-009 11 3
6.4.44-001 10 18
6.4.6-001 4 44
FR04T029 10 2
FR08T074 10 20
6.28.55-002 3 4
FR01T050 11 2
5.10.25-001 10 3
5.10.25-002 10 11
5.16.25-002 10
5.16.25-003 10
5.16.25-004 10
5.16.25-005 10
5.16.25-009 10 4
5.16.25-010 10
5.16.25-013 10
5.18.25-005 3 6
4.3.1-008 11 2
5.3.1-005 10 3
FR09T037 10 11
6.29.50-001 11 5
6.29.50-002 15 3
6.29.50-003 11 5
6.29.50-004 11 15
6.29.50-005 3 5
6.29.50-007 3 5
6.29.50-008 11 15
6.30.50-004 10 5
6.30.50-005 3 5
6.31.50-001 4 5
6.31.50-002 15 4
6.31.50-003 15 4
6.31.50-004 4 5
6.31.50-005 10 5
6.32.50-001 3 5
6.32.50-002 15 3
6.32.50-003 15 3
6.32.50-004 11 5
6.32.50-005 11 5
6.32.50-006 11 15
6.32.50-007 11 5
6.32.50-008 11 15
6.33.50-001 3 5
5.10.26-001 11 6
5.10.26-002 11 5
5.10.26-003 3 6
5.10.26-004 3 6
5.10.26-005 3 6
5.10.26-007 11 6
5.10.26-008 11 5
5.13.26-001 3 6
5.13.26-002 4 5
5.13.26-003 3 6
5.13.26-004 3 5
5.13.26-005 4 5
5.13.26-006 4 6
5.13.26-007 3 5
5.13.26-009 3 5
5.14.26-001 10
5.14.26-002 10 6
5.14.26-003 10 6
5.16.26-001 4 6
5.16.26-002 4 5
5.16.26-003 4 5
5.16.40-001 4 6
5.18.26-001 2 6
5.18.26-002 2 5
FR06T097 2 3
FR07T026 2 3
6.28.44-003 11 3
AA 10 3
PC 9816-069 11 3
PC 9816-079 10 3
PC 9816-096 10 3
PC 9816-104 10 4
PC 9816-114 11 3
PC 9817-097 10 3
4.18.15-010 10 3
4.18.15-042 11 12
4.18.15-047 11 12
4.18.15-048 11
4.3.1-003 10
4.3.1-005 10 2
4.3.1-006 10
4.3.1-007 10 12
5.3.1-009 10
5.3.1-011 10 12
5.3.1-012 10 12
5.3.1-013 12 2
5.3.1-014 10 12
5.4.15-001 10 12
5.4.15-002 10 4
5.4.15-003 10 4
FR01T070 10 3
FR49T083 10 2
5.16.17-003 10
5.16.25-006 10 4
5.16.25-008 10 4
5.16.25-012 10
5.20.6-001 10 5
6.16.44-008 4
6.4.6-004 4
6.4.6-006 10 4
6.4.6-007 10 4
6.4.6-008 10 3
6.4.6-009 4 5
5.16.17-001 10 3
5.16.17-004 3 4
6.14.17-001 11 2
6.14.17-002 10 3
6.14.17-003 11 3
6.14.17-004 11 2
6.14.17-005 10 3
FR02T024 10 2
4.14.17-001 10 3
5.13.26-008 4
6.28.44-004 12 3
4.3.1-001 11 2
5.3.1-007 11 2
5.3.1-018 2
5.10.40-001 11
5.10.40-002 11 3
5.10.40-003 11 3
5.10.40-004 2 3
5.10.40-005 11
5.10.40-007 2 3
5.10.40-008 11 3
5.10.40-009 11 2
5.10.40-010 2 3
5.10.40-011 2 3
5.10.40-012 2 3
5.10.40-013 11
5.10.40-014 2 3
5.10.40-015 11
5.10.40-016 11
5.10.40-017 11 3
5.13.40-002 11 3
5.13.40-003 11 4
5.13.40-004 11 3
5.16.40-003 10 11
5.16.40-004 2 4
6.30.50-001 10 2
6.30.50-003 2 3
6.10.55-001 3 5
6.10.55-002 11 5
6.10.55-003 3 5
6.10.55-004 11
6.10.55-005 11 5
6.10.55-006 11 5
6.10.55-007 18 3
6.10.55-008 18 3
6.10.55-009 11 5
6.10.55-010 3 5
6.16.55-001 10 5
6.16.55-002 10 5
6.23.17-001 5
6.23.55-002 5
6.23.55-005 5
6.23.55-007 18 3
6.23.55-008 3 5
6.28.55-001 18 3
6.28.55-003 4 5
6.28.55-004 18 3
6.28.55-005 18 4
5.13.40-001 2 3
5.16.25-001 29 4
5.18.25-004 2 3
5.3.1-006 12 4
6.16.44-004 3 4
6.16.44-006 10 9
6.16.44-007 3 4
6.16.44-009 4
6.23.17-003 10 5
6.23.17-004 2 3
Bertiolle 2 9
Napoleon 2 4
Haplotypes
Marker 23456789101112131415161718192021222324252627282930313233343536373839404142434445464748
RosBREED_snp_sweet_cherry_Pp1_44719900BBBBBBBBBBABABBBBBBBBBBBBBABAAABBBBBBBBBBBBBBBB
RosBREED_snp_sweet_cherry_Pp1_44764542BABABABBBBAAAABAABBBBABAA--AAAAAAAABBAABABBBBBB
RosBREED_snp_sweet_cherry_Pp1_44796418ABBBABAABBBBBBABBBBAABBBBBBBBBBBBBBBBBBBB--BB--
RosBREED_snp_sweet_cherry_Pp1_44919064BAAABABBAAAAAAABAAA--AAAAAAAAAAAAAAAAAAAAAAAA--
RosBREED_snp_sweet_cherry_Pp1_45028492BBBABBBBBBABBABAABBBBBBABBABBAABABABBBABABBBBBB
RosBREED_snp_sweet_cherry_Pp1_45119230BBBBBBBBBBBABBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
RosBREED_snp_sweet_cherry_Pp1_45163766AABBAAAABBABAAAAABBAABBBA--ABAABAABBBABBABBBB--
RosBREED_snp_sweet_cherry_Pp1_45210413BBABBBBBBABBBBBBBBBBBAABB--BBBBBBBBB-BBABAABABA
RosBREED_snp_sweet_cherry_Pp1_45322930BBAABBAAAABABBBBBAABBABBB--AAABABBAAABAABAAAA--
RosBREED_snp_sweet_cherry_Pp1_45402154ABBBBBBBBBABBBAABBBBABBBBBABBBBBBBBBBBBBBBBBBBB
RosBREED_snp_sweet_cherry_Pp1_45473214BAABBBBABABBBABBBABBBAABAABABBAABABB-BBBBAABABA
RosBREED_snp_sweet_cherry_Pp1_45535084AAAAABAAAAAAAAAABAAAAAAAAAAAAAAAAAAAAAAABAAAAAA
RosBREED_snp_sweet_cherry_Pp1_45601390BBABBBBBBBBBBBBBBBBBBABBABBABBBBBBBA-BBBBABABBB
RosBREED_snp_tart_cherry_a_Pp1_44823707AAAAAAAAAABABBABBAAAAAAAAABAABBAAAAAAAAAAAAAAAA
RosBREED_snp_tart_cherry_a_Pp1_45418879AAAAAAAAAAABAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
RosBREED_snp_tart_cherry_a_Pp1_45498179AAAABBABAAABBAAABA-BAAABAAAAAAAAAAAAABBABAAAAAA
RosCOS1159-099_snp_sweet_cherry_Pp1_45077993ABBAAAAAABAAAAAABAAAABBABBABAAAABABA-AABBBBBAAB
RosCOS1159-307_snp_sweet_cherry_Pp1_45077786BBBBBBBBBBBABBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
RosCOS1409-570_snp_sweet_cherry_Pp1_45469715BAABBBBABABABABBBABBBAABAABABBABAABB-BBBBAABABA
RosCOS1448-113_snp_sweet_cherry_Pp1_45226245BAAAAAABAAAAAABAAAAABAAAAAAAAAAAAAAAAAAAAAAAA--
RosCOS2618-113_snp_sweet_cherry_Pp1_45473668BBBBAABBBBBBABBBABBABBBABBBBBBBBBBBBBAABABBBBBB
Alignments
Feature NameTypeLocationAnalysis
Pp08 chromosome Pp08:1... Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)