Pav-HB-03-24

Haplotype Block Overview
Name Pav-HB-03-24
Species Prunus avium
Stock Haplotype [view all 517]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Summit 3 9
Lambert 3 4
Regina 3 9
Ambrunes 6 7
Lapins 2 9
Stella 2 3
Sweetheart 2 9
Van 9
Schneiders 2 3
Bing 3 9
Rainier 3 9
5.18.25-001 3 9
5.3.1-001 2 9
5.3.1-002 2 9
Benton 2 5
Brooks 5 9
Cashmere 3 5
Chelan 2 5
Chinook 3
Cowiche 5 9
Gil Peck 3
Glacier 3
Kiona 3 5
Mildew Immune Mazzard #17 14 15
Mildew Immune Mazzard #23 14 15
Newstar 3 9
NY 54 16 6
PMR-1 3 5
Sato Nashiki 17 3
Schmidt 15 18
Selah 3
Tieton 3 5
Ulster 3
Vic 15 3
Windsor 20 9
23_1_47 16 3
23_2_46 16 3
23_3_24 2 6
23_3_28 16 3
23_3_40 3 6
23_5_17 3 6
23_8_24 16 3
23_8_45 16 2
4.10.19-001 2 5
4.10.19-002 2 5
4.10.19-003 2 3
4.10.19-004 2 3
4.10.19-005 9
4.10.19-006 2 5
4.10.19-008 3 9
4.10.19-009 2 5
4.10.19-010 3 9
4.10.19-011 3 9
4.10.2-001 6 9
4.10.2-002 6 9
4.10.2-004 6 9
4.10.2-005 7 9
4.10.2-006 2 6
4.10.2-008 9
4.10.2-009 6 9
4.10.2-010 2 6
4.10.5-001 2
4.10.5-002 2 9
4.10.5-003 2
4.10.5-004 5 9
4.10.5-005 2 9
4.10.5-006 2
4.10.5-015 2 9
4.10.5-016 2 9
4.10.5-018 5 9
4.10.5-019 2 5
4.10.5-020 2
4.10.5-028 2
4.10.5-029 2 9
4.10.5-030 2 9
4.16.2-001 3 6
4.18.15-001 3 9
4.18.15-002 3 9
4.18.15-003 2 9
4.18.15-004 9
4.18.15-005 3 9
4.18.15-006 9
4.18.15-007 3 9
4.18.15-009 9
4.18.15-011 2 9
4.18.15-012 9
4.18.15-013 2 3
4.18.15-014 2 3
4.18.15-015 3 9
4.18.15-016 2 9
4.18.15-028 2 3
4.18.15-030 2 9
4.18.15-039 3 9
4.18.15-040 2 3
4.18.15-043 2 3
4.18.2-005 7
4.18.2-007 2 7
4.18.2-008 2 6
4.18.2-010 6 9
4.18.2-015 2 6
4.18.2-016 7
4.18.2-018 7 9
4.18.2-019 2 7
4.18.2-020 7 9
4.18.2-024 7 9
4.18.2-027 6 9
4.18.2-028 6 9
5.12.5-005 3 5
5.12.5-007 2 3
5.12.5-008 2 5
5.12.5-009 5
5.12.5-010 2 3
5.12.5-011 3 5
5.12.5-019 3 41
5.12.5-020 2 5
5.12.5-021 2 3
5.12.5-022 2 3
5.14.15-003 3 9
5.14.15-004 3
5.14.15-005 3
5.14.15-007 3
5.14.15-013 3
5.14.15-014 9
5.14.15-015 9
5.14.15-016 3 9
5.14.15-017 3
5.14.15-018 9
5.14.15-019 3 9
5.14.15-020 9
5.14.23-003 3 5
5.14.23-004 2 9
5.14.23-006 5 9
5.23.15-001 2 5
5.23.15-002 5 9
5.23.2-001 5 7
5.23.2-002 5
5.23.2-003 5 6
5.28.15-001 3 5
5.28.15-002 3 5
5.28.15-003 5 9
5.28.15-004 5 9
5.28.15-005 9
5.28.15-006 5 9
5.28.15-007 3 5
5.28.15-008 3 9
5.28.15-009 3 9
5.28.15-010 3 5
5.28.15-011 3 5
5.28.15-012 5 9
5.28.15-013 3 5
5.28.37-001 5 9
5.28.37-002 3 9
5.28.37-003 3 5
5.28.37-004 3 9
5.28.37-005 5 9
5.28.37-008 5 9
5.28.37-009 3 9
5.28.37-010 9
5.28.37-011 3 9
5.28.37-012 2
5.4.15-004 3 9
5.4.15-005 3 9
6.14.2-006 3 6
6.14.2-007 7 9
6.14.2-008 3 7
6.14.2-009 3
6.14.2-010 7 9
6.14.2-011 3 6
6.14.2-012 3 7
6.14.2-013 3 9
6.14.2-015 6 9
6.29.49-001 15 3
6.29.49-002 14 3
6.29.49-003 15 3
6.29.49-005 15 3
6.29.49-007 15 3
6.29.49-008 15 3
6.30.49-009 15 3
6.30.49-011 15 3
6.30.49-012 14 3
6.30.49-013 14 3
6.30.49-014 14 5
6.30.49-015 14 3
6.30.49-016 15 5
6.30.49-017 14 3
6.31.49-003 5
6.31.49-004 15 5
6.31.49-005 14 9
6.31.49-006 14 9
6.31.49-007 15 5
6.31.49-009 14 9
6.31.49-010 15 5
6.31.49-011 14 5
6.31.49-012 14 9
6.31.49-013 15 5
6.31.49-014 14 5
6.31.49-015 14 9
6.32.49-032 14 3
6.32.49-033 14 3
6.32.49-034 14 3
6.32.49-035 14 3
6.32.49-037 15 3
6.32.49-038 14 3
6.32.49-039 14 3
6.32.49-040 15 3
6.32.49-041 15 3
6.33.49-001 14 9
6.33.49-002 14 9
6.33.49-003 15 3
6.33.49-004 14 3
23-01-11 2 6
23-02-34 16 2
23-03-13 16 2
23-03-23 16 2
23-03-48 16 3
23-03-56 16 2
23-06-04 6
23-06-23 3 6
23-07-26 16 3
23-08-55 16 3
Dzherlo 3
Olympus 3 9
PC 7146-16 3 5
Kordia 12 2
Cristobalina 10 11
Vittoria 15 4
FR20T047 2
FR13T004 2 3
FR13T071 3
FR31T121 4 9
FR32T087 2 3
FR32T088 3 8
FR32T093 8 9
FR20T045 3 5
FR26T117 2 9
FR29T115 15 3
PC 9816-005 3 5
PC 9816-023 5 9
PC 9816-041 3 5
PC 9816-059 3 9
PC 9816-083 5 9
PC 9816-103 3
PC 9816-105 3 9
PC 9816-106 3
PC 9816-112 3 9
PC 9816-078 5 9
PC 9819-005 5 9
PC 9819-031 5 9
PC 9819-038 5 9
PC 9814-025 3 9
PC 9814-078 3
PC 9814-103 3
PC 9814-105 3 5
PC 9814-026 3 5
PC 9814-028 3 5
PC 9814-055 3
PC 9814-062 3
PC 9814-063 3 5
PC 9814-068 3 5
PC 9814-071 3 9
PC 9814-076 3 9
PC 9819-034 3
PC 9816-042 2 9
Emperor Francis 2 3
Black Republican 3 9
Krupnoplodnaya 13 3
Early Burlat 3 5
Venus 3 9
Moreau 3 5
Index 3
Sunburst 19 3
6.14.6-008 9
FR02T062 7 9
FR02T063 7 9
5.14.23.001 2 3
6.16.44-005 3 5
6.23.44-001 5
6.23.44-002 5
6.23.55-006 2 5
6.23.55-010 5
6.23.6-002 2
6.23.6-003 2
6.16.44-001 3 8
6.16.44-002 2 3
6.16.44-003 2 3
6.28.44-001 2 9
6.28.44-002 5
6.4.44-003 8 9
6.4.44-004 8 9
6.4.44-006 2 3
6.4.44-007 8 9
6.4.44-009 2 3
6.4.44-010 8 9
6.4.45-001 3 8
4.3.1-004 12 9
4.3.1-009 12 9
5.3.1-008 2 9
5.3.1-010 12 3
5.3.1-015 2 3
5.3.1-016 12 9
5.3.1-017 12 3
6.30.50-002 3 5
6.14.6-003 3
6.28.45-001 2 5
FR09T089 2 5
6.12.45-001 10 5
6.12.45-002 10 3
6.12.45-003 3
6.12.45-004 11 5
6.12.45-005 10 5
6.12.45-007 10 3
6.12.45-008 10 3
6.12.45-009 10 5
6.12.45-010 11 3
6.14.45-001 11 3
6.14.45-003 10 9
6.14.45-004 10 3
6.14.45-005 10 3
6.14.45-006 10 3
6.14.45-007 10 3
6.14.45-008 11 9
6.14.45-009 11 3
6.28.45-002 9
6.14.6-001 3
6.14.6-002 3
6.14.6-004 3
6.14.6-005 3
6.14.6-006 3 9
6.14.6-007 3 9
6.14.6-010 3 9
6.23.6-004 3 5
6.23.6-005 2 3
6.23.6-007 2 3
6.23.6-008 2 3
6.23.6-012 2 3
6.28.44-005 3 9
6.28.55-006 3 5
6.28.55-007 5 9
6.23.6-001 2 9
6.23.6-006 2
6.23.6-009 5 9
6.4.44-001 15 9
6.4.6-001 3 9
FR04T029 3 9
FR08T074 3 9
6.28.55-002 3 9
FR01T050 2
5.10.25-001 3 9
5.10.25-002 3 9
5.16.25-002 13 3
5.16.25-003 3
5.16.25-004 3
5.16.25-005 13 3
5.16.25-009 13 3
5.16.25-010 3
5.16.25-013 3
5.18.25-005 3 9
4.3.1-008 2 9
5.3.1-005 12 2
FR09T037 2 9
6.29.50-001 14 3
6.29.50-002 14 3
6.29.50-003 14 3
6.29.50-004 15 3
6.29.50-005 15 3
6.29.50-007 15 3
6.29.50-008 3
6.30.50-004 14 3
6.30.50-005 15 5
6.31.50-001 15 9
6.31.50-002 5
6.31.50-003 5
6.31.50-004 14 5
6.31.50-005 5
6.32.50-001 15 3
6.32.50-002 15 3
6.32.50-003 15 3
6.32.50-004 15 3
6.32.50-005 15 3
6.32.50-006 15 3
6.32.50-007 15 3
6.32.50-008 14 3
6.33.50-001 14 9
5.10.26-001 3 9
5.10.26-002 5 9
5.10.26-003 3 9
5.10.26-004 2 5
5.10.26-005 2 3
5.10.26-007 2 3
5.10.26-008 2 5
5.13.26-001 5
5.13.26-002 3 5
5.13.26-003 3 5
5.13.26-004 3 5
5.13.26-005 3
5.13.26-006 3 5
5.13.26-007 3 5
5.13.26-009 3 5
5.14.26-001 5 9
5.14.26-002 3
5.14.26-003 3
5.16.26-001 3
5.16.26-002 3 5
5.16.26-003 3
5.16.40-001 3
5.18.26-001 2 3
5.18.26-002 2 3
FR06T097 5 9
FR07T026 5 9
6.28.44-003 3 9
AA 3
PC 9816-069 3
PC 9816-079 3 5
PC 9816-096 3
PC 9816-104 5 9
PC 9816-114 3
PC 9817-097 3 9
4.18.15-010 2 9
4.18.15-042 9
4.18.15-047 2 9
4.18.15-048 3 9
4.3.1-003 2 9
4.3.1-005 2 3
4.3.1-006 12 9
4.3.1-007 2 9
5.3.1-009 2 3
5.3.1-011 12 3
5.3.1-012 12 3
5.3.1-013 12 9
5.3.1-014 12 3
5.4.15-001 9
5.4.15-002 3
5.4.15-003 3 9
FR01T070 2 3
FR49T083 2 3
5.16.17-003 3
5.16.25-006 3
5.16.25-008 3
5.16.25-012 3
5.20.6-001 2 3
6.16.44-008 3
6.4.45-003 3 9
6.4.6-004 3
6.4.6-006 3
6.4.6-007 3
6.4.6-008 3 5
6.4.6-009 3 5
5.16.17-001 3
5.16.17-004 3
6.14.17-001 19 3
6.14.17-002 3
6.14.17-003 19 3
6.14.17-004 19 9
6.14.17-005 19 9
FR02T024 3
4.14.17-001 3 9
5.13.26-008 3 5
6.28.44-004 3 5
4.3.1-001 12 9
5.3.1-007 12 9
5.3.1-018 2 9
5.10.40-001 3 9
5.10.40-002 9
5.10.40-003 3
5.10.40-004 9
5.10.40-005 3 9
5.10.40-007 3 9
5.10.40-008 9
5.10.40-009 3 9
5.10.40-010 3 9
5.10.40-011 3 9
5.10.40-012 2 3
5.10.40-013 3 9
5.10.40-014 2 3
5.10.40-015 9
5.10.40-016 2 9
5.10.40-017 2 3
5.13.40-002 3 5
5.13.40-003 3
5.13.40-004 5 9
5.16.40-003 3
5.16.40-004 3 9
6.30.50-001 3 9
6.30.50-003 3 9
6.10.55-001 15 9
6.10.55-002 2 4
6.10.55-003 15 9
6.10.55-004 2
6.10.55-005 2 4
6.10.55-006 15 9
6.10.55-007 2 4
6.10.55-008 15 2
6.10.55-009 15 9
6.10.55-010 2 4
6.16.55-001 3 4
6.16.55-002 15 3
6.23.17-001 2 4
6.23.55-002 4 5
6.23.55-005 2 4
6.23.55-007 2 4
6.23.55-008 15 5
6.28.55-001 4 5
6.28.55-003 4 9
6.28.55-004 15 5
6.28.55-005 15 5
5.13.40-001 2 5
5.16.25-001 3 9
5.18.25-004 9
5.3.1-006 3 5
6.16.44-004 3 5
6.16.44-006 3 8
6.16.44-007 19 3
6.16.44-009 3 5
6.23.17-003 5
6.23.17-004 19 5
Bertiolle 2 8
Napoleon 3 4
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Pav-HB-03-24Sweet Cherry-RosBREED-1.6K-2019367.5273.65
Haplotypes
Marker 234567891011121314151617181920212223242526272829303132333435363738394041
RosBREED_snp_sweet_cherry_Pp3_18512598ABABAABBABAABABAAAABBAABBBBAAABABAAABAAA
RosBREED_snp_sweet_cherry_Pp3_19018695ABABBBBBAAAAABBBABABBBAABBBBBABAAAABABBA
RosBREED_snp_sweet_cherry_Pp3_19065063ABABBBBBABBBBBBBABABBBAABBBBBBBABBABBBBA
RosBREED_snp_sweet_cherry_Pp3_19163021AAAAABAAAABAAAAAAAAAAAAAAAABABAAAAAAAAAA
RosBREED_snp_sweet_cherry_Pp3_19297291BABAABAAAABAAAAABABAAABBBAABABABAAAAAAAA
RosBREED_snp_sweet_cherry_Pp3_19524559BBBBBBBBBBBBBABABABBBABBBBBBBBBBBBBBABBB
RosBREED_snp_sweet_cherry_Pp3_19579065BBBBBABBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB
RosBREED_snp_sweet_cherry_Pp3_19626170AAAAABAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
RosBREED_snp_sweet_cherry_Pp3_19716836AAAABABABAAABBBAABAAABAAAAABBAABBBABBABA
RosBREED_snp_sweet_cherry_Pp3_19812127AABAABAABABAAAABAAAAAAAAAAAAABAABAAAAAAA
RosBREED_snp_sweet_cherry_Pp3_19858004AABBBBAABABABABBAABAAAAAABBBBBBABBABABBA
RosBREED_snp_sweet_cherry_Pp3_19947464AAAAABAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABA
RosBREED_snp_sweet_cherry_Pp3_20043199BBBAAABBBBBBBBABBBABBBBBBAAAABABBBBBBAAB
RosBREED_snp_sweet_cherry_Pp3_20094909AAAAABAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABA
RosBREED_snp_sweet_cherry_Pp3_20204650AAAAABAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABA
RosBREED_snp_sweet_cherry_Pp3_20243623BBBBABBBBBBBBBABBB--BBBBBB---BBBBBBBBBBB
RosBREED_snp_tart_cherry_a_Pp3_19021765AAAAAAAAABBBBAAAAAAAAAAAAAAAABAABBAABAAA
RosBREED_snp_tart_cherry_a_Pp3_19434425BBBBBABBBBBBBABABABBBABBBBBABBBBBBBBABBB
RosBREED_snp_tart_cherry_a_Pp3_19896497AAAAABAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABA
RosBREED_snp_tart_cherry_a_Pp3_20259294AAAAABAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAABA
RosCOS1559-306_snp_sweet_cherry_Pp3_20247750AAAABABBAAAAAABABBBB---AA-ABB-BBAAAAAAAB
Alignments
Feature NameTypeLocationAnalysis
Pp03 chromosome Pp03:23855262..25601757. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)