Mdo-HB-16-48

Haplotype Block Overview
Name Mdo-HB-16-48
Species Malus x domestica
Stock Haplotype [view all 428]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Cox's Orange Pippin 3
Rome Beauty Law 3 4
Jonafree 2
Redfree 2 3
Spartan 3 4
Wagener 2 3
Worcester Pearmain 3
Tsugaru 2 3
Golden Delicious 2
Fuji 3 4
Empire 3 4
Gala 2 4
Honeycrisp 3
Elstar 2 3
Marshall McIntosh 2 3
Cripps Pink 2 3
Granny Smith 2 3
Jonathan 2 3
Ralls Janet 3
Delicious 3 4
Discovery 3
Prima 2 3
821 2
Fiesta 3
Ingrid Marie 3
Idared 2 3
Esopus Spitzenburg 3
Braeburn 3
Sansa 3 4
Lodi 3
James Grieve 3
Cripps Red 2 3
Burgundy 3
Akane 3
Ambrosia 2 3
Aurora Golden Gala 2 3
Beacon 3
Ben Davis 2 3
Cameo 3 4
Chinook 2 4
Clivia 3
Co-op 17 3
Co-op 18 2
Dayton 2 3
Delblush 2
Delorgue 2 3
Dolgo 2 3
Geheimrat Dr. Oldenburg 3
Duchess of Oldenburg 3
Early Cortland 2 3
Empress 3 4
F2 26829-2-2 2
Fantazja 3
Fireside 2
Fortune 2 3
Frostbite 3 4
Ginger Gold 2 3
GMAL 4327 2 3
GMAL 4328 2 3
GMAL 4329 2 3
GMAL 4332 2 3
Goodland 3
Haralson 2 3
Honeygold 2 3
Hudson 3 4
Jersey Black 3 4
Jonamac 3
Keepsake 3
Kerr 3
Lady Williams 2 3
Liberty 3 4
Linda 3
Longfield 3
Macoun 2 4
Malinda 3
Melba 3
MN 1627 2 3
MN 1628 2 3
MN 1691 2 3
MN 1706 3
MN 1708 3
MN 1760 3 4
MN 1764 3 4
MN 1789 2
MN 1802 2 3
MN 1836 3
MN 1837 3
MN 1839 2 3
MN 1888 2
MN 1899 2 3
MN 1940 2 3
MN 2016 3
AA-44 2 4
Monroe 3
Montgomery 2 3
Nicola 2 3
NJ 31 2
NJ 53 3 4
Oriole 3
PRI 14-126 2
PRI 14-510 2
PRI 16-144 2
PRI 1661-2 3 4
PRI 54-12 2 3
PRI 855-102 2
Primula 2 3
Raritan 3
Regent 2 3
Russian Seedling 2
Sawa 2 3
Sciros 2
Sharon 2 3
Silken 2
Wildung 2
Splendour 2 3
State Fair 3
NJ 55 2 3
Co-op 29 2
Sunrise 2
Sweet Sixteen 2 3
Topaz 2 3
Vista Bella 3 4
Wealthy 2 3
Winesap 3
Winter Banana 3
Yellow Newtown 3
Yellow Transparent 3
0407-0001 3
0407-0005 3
0407-0006 2 3
0407-0007 2
0407-0008 2 3
0408-0003 2 4
0408-0004 2 4
0408-0005 2 4
0408-0007 2
0408-0008 2 3
0408-0010 3 4
0408-0011 3 4
0408-0014 2 4
0408-0015 2
0409-0022 3
0409-0024 2 3
0409-0028 2 3
0409-0030 2 3
0409-0032 3
0409-0035 2 3
0409-0036 2 3
0409-0038 2 3
0409-0039 3
0409-0040 3
0409-0043 3
0409-0045 2 3
0410-0002 2 3
0410-0003 2 3
0410-0005 3
0410-0006 2
0410-0010 3
0410-0011 2
0410-0012 2 3
0410-0013 3
0410-0015 3
0410-0017 3
0410-0018 2
0414-0010 2 3
0414-0015 3
0414-0017 3
0414-0018 3 4
0414-0019 3
0414-0020 2 3
0414-0021 2 3
0415-0001 2 3
0415-0004 3 4
0415-0005 3 4
0415-0011 2 3
0415-0012 3 4
0415-0013 3 4
0415-0014 3
0415-0016 2 3
0415-0017 2 3
0415-0019 2 3
0415-0020 2 3
0415-0025 2 3
AE_HCxJonf-145 2 3
AE_HCXJonf-148 2 3
AE_HCxJonf-157 2 3
AE_HCXJonf-162 2 3
AE_HCXJonf-168 3
AE_HCxJonf-175 2 3
AE_HCxJonf-183 2 3
AE_HCxJonf-185 2 3
AE0118-237 3
AE0118-238 2 3
AE0118-239 3
AE0118-240 2 3
AE0118-243 2 3
AE0118-244 2 3
AE0118-245 2 3
AE0118-246 2 3
AE0118-249 3
AE0206-159 3 4
AE0206-160 3 4
AE0206-161 3
AE0206-162 2 3
AE0206-163 3
AE0206-164 3 4
AE0206-165 2 4
AE0206-167 2 3
AE0206-168 2 3
AE0206-169 2 3
AE0206-170 2 4
AE0210-146 2 3
AE0210-147 2 3
AE0210-149 2
AE0210-150 2
AE0210-151 2 3
AE0210-152 2 3
AE0210-153 2 3
AE0210-154 2 3
AE0210-157 2
AE0210-158 2
AE0210-159 2
AE0210-162 2
AE0210-163 2 3
AE0210-164 2 3
AE0210-165 2
AE0210-166 2
AE0210-168 2
AE0210-169 2
AE0210-170 2 3
AE0210-171 2 3
AE0210-172 2 3
AE0210-173 2
AE0210-174 2 3
AE0213-175 2
AE0213-176 2
AE0213-177 2 3
AE0213-178 2
AE0213-179 2
AE0213-180 2 3
AE0213-181 2 3
AE0213-182 2
AE0213-183 2
AE0213-186 3
AE0213-187 3
AE0213-190 3
AE0213-193 2 3
AE0213-194 2 3
AE0213-195 2
AE0213-196 2 3
AE0213-197 2
AE0213-198 2 3
AE0213-199 2 3
AE0213-200 2 3
AE0213-201 2 3
AE0213-202 2
AE0213-205 2 3
AE0213-206 3
AE0251-323 2 4
AE0251-327 3
AE0251-329 2 4
AE0251-330 3 4
AE0251-331 2 3
AE0251-342 3 4
AE0251-343 3 4
AE0406-239 2 3
AE0406-254 2 3
AE0406-258 2 3
AE0406-259 2 3
AE0406-263 2 3
AE0406-264 2 3
AE0406-266 2 3
AE0406-271 2 3
AE0406-274 2 3
AE0406-278 2 3
AE0406-281 2 3
AE0406-286 2 3
AE0406-288 2 3
AE0406-289 2 3
AE0406-294 2 3
AE0406-298 2 3
Minneiska 3
NJ 303955 3
PRI 612-1 2 4
Arlet 2 3
Co-op 39 2 3
Pinova 2 3
Scired 3 4
Scifresh 3 4
0409-0025 3
0409-0026 2 3
0409-0027 3
0409-0031 2 3
0409-0033 3
0409-0047 2 3
G-14-050 2 3
G-14-052 3
G-14-054 3
G-14-055 3
G-14-056 3
G-14-057 2 3
G-14-059 2 3
G-14-060 3
G-14-061 3
G-14-062 3
G-14-064 3
G-14-065 2 3
G-14-069 3
G-14-067 3
G-14-068 2 3
G-14-071 2 3
G-14-073 3
G-14-074 2 3
G-14-075 3
G-14-076 3
G-14-077 3
G-14-078 2 3
G-14-080 2 3
G-09-232 2 3
G-09-233 3
G-09-234 3
G-09-235 2 3
G-09-236 2 3
G-09-237 3
G-09-238 2 3
G-09-239 3
G-09-240 3
G-09-241 2 3
G-09-242 3
G-09-243 3
G-09-245 3
G-09-246 3
G-09-258 2 3
G-09-259 3
G-09-260 2 3
G-09-261 3
G-09-262 3
G-09-263 3
G-09-264 2 3
G-09-265 2 3
G-09-266 3
G-09-267 2 3
G-09-268 3
0408-0021 2 3
Wijcik McIntosh 2 3
Beauty of Bath 3
Priam 2 3
Northern Spy 2 3
Co-op 15 2 3
MN 1702 2 4
WA 2 2 4
WA 5 2 3
Pitmaston Pineapple 3
0411-0011 2
0411-0017 2 3
0411-0023 2 3
AE0250-086 2 4
AE0250-087 2 4
AE0250-089 2 4
AE0250-090 2 3
AE0250-092 3 4
AE0250-093 3 4
AE0250-094 2 4
AE0250-095 2 3
Sonya 3 4
Co-op 38 2 3
AE0250-096 2 3
AE0250-327 2
Co-op 30 2 4
Jonagrimes 2 3
AE0211-036 2 3
G-07-039 3 4
PRI 14-152 2
PRI 47-176 2 3
G-07-041 3 4
BC-8S-27-43 3 4
AE0250-091 3
AE0250-097 3
AE0250-325 2 3
AE0250-326 3
AE0250-329 2 3
AE0250-333 3
AE0250-334 3
AE0250-335 3
AE0250-336 2 3
AE0250-338 3
AE0250-341 3
AE0211-038 2 3
AE0211-043 2 3
AE0211-045 3
AE0211-051 2 3
G-07-010 3
G-07-014 3 4
G-07-015 2 3
G-07-019 3
G-07-020 3
G-07-024 3 4
G-07-032 2 3
G-07-033 2 4
G-07-034 3 4
G-07-035 2 4
G-07-044 3
AE0211-053 2 3
AE0211-054 2
AE0250-088 2 3
AE0250-324 2 3
AE0250-328 3
AE0250-331 2 3
AE0250-332 3
AE0250-337 3
AE0250-339 2 3
Minnewashta 2 3
Autumn Crisp 2 3
G-14-066 3
Lu1-11-010 2 4
Lu1-11-013 2 3
Lu1-11-016 2 3
Lu1-11-017 2 4
Lu1-11-018 2 4
NJ 90 3 4
Lord Lambourne 3
Antonovka GH 2 3
Grimes Golden 2
Kidds Orange Red 3 4
Malus baccata Hansen #2 2
Malus baccata Jackii 2
Summerred 2 3
William's Pride 3 4
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Mdo-HB-16-48Apple-RosBREED-3.9K-20191666.0266.02
Projects
Project Name
RosBREED_Apple_CRS_Haplotype_2020
Alignments
Feature NameTypeLocationAnalysis
Chr16 chromosome Chr16:38213702..38213926. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation