Mdo-HB-16-31

Haplotype Block Overview
Name Mdo-HB-16-31
Species Malus x domestica
Stock Haplotype [view all 427]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Cox's Orange Pippin 2 3
Rome Beauty Law 2
Jonafree 3
Redfree 3 4
Spartan 4
Wagener 2 4
Worcester Pearmain 2 4
Tsugaru 3
Golden Delicious 2 3
Fuji 2 4
Empire 4
Gala 3 4
Honeycrisp 2 3
Elstar 2 3
Marshall McIntosh 2 4
Cripps Pink 3 4
Granny Smith 3
Jonathan 3 4
Ralls Janet 2
Delicious 2 4
Discovery 2 4
Prima 2 4
821 2 4
Fiesta 3
Ingrid Marie 2
Idared 2 3
Esopus Spitzenburg 2 3
Braeburn 2 4
Sansa 3 4
Lodi 2
James Grieve 2 3
Cripps Red 3 4
Burgundy 2 4
Akane 2 3
Ambrosia 2 3
Aurora Golden Gala 2 3
Beacon 2 3
Ben Davis 2 3
Cameo 2 4
Chinook 3 4
Clivia 2 3
Co-op 17 3 4
Co-op 18 3
Dayton 2 3
Delblush 2 3
Delorgue 2 3
Dolgo 4
Geheimrat Dr. Oldenburg 2
Duchess of Oldenburg 2
Early Cortland 2 3
Empress 3 4
F2 26829-2-2 3 4
Fantazja 4
Fireside 3 4
Fortune 2 3
Frostbite 2
Ginger Gold 2 3
GMAL 4327 4
GMAL 4328 2 4
GMAL 4329 4
GMAL 4332 4
Goodland 2
Haralson 3 4
Honeygold 2 3
Hudson 3 4
Jersey Black 4
Jonamac 3 4
Keepsake 2 3
Kerr 3 4
Lady Williams 3 4
Liberty 2 4
Linda 2 4
Longfield 2 8
Macoun 2 4
Malinda 3
Melba 2 4
Melrose 3 4
MN 1627 2 3
MN 1628 2
MN 1691 2 3
MN 1706 2
MN 1708 2 3
MN 1760 2 3
MN 1764 2 3
MN 1789 3
MN 1802 3 4
MN 1836 2 3
MN 1837 2
MN 1839 2 3
MN 1888 3
MN 1899 3
MN 1940 3
MN 2016 3 4
AA-44 2 3
Monroe 2 3
Montgomery 2 4
Nicola 2 4
NJ 31 2 3
NJ 53 3 4
Oriole 2 4
PRI 14-126 3 4
PRI 14-510 2 4
PRI 1661-2 2 4
PRI 54-12 2 4
PRI 855-102 3
Primula 3 4
Raritan 2
Regent 2 3
Russian Seedling 4
Sawa 3 4
Sciros 3
Sharon 2 4
Silken 3 4
Wildung 2 3
Splendour 2 3
State Fair 3 4
NJ 55 2 3
Co-op 29 2 3
Sunrise 2 4
Sweet Sixteen 2 3
Topaz 2
Vista Bella 3 4
Wealthy 2 4
Winesap 2 4
Winter Banana 2
Yellow Newtown 2 4
Yellow Transparent 2
0407-0001 2 3
0407-0005 2 3
0407-0006 3
0407-0007 2
0407-0008 2 3
0408-0003 2 4
0408-0004 3
0408-0005 3 4
0408-0007 3
0408-0008 2 3
0408-0010 2 4
0408-0011 2 3
0408-0014 2 4
0408-0015 3
0409-0022 2
0409-0024 2 3
0409-0028 2 3
0409-0030 3
0409-0032 3
0409-0035 3
0409-0036 2 3
0409-0038 3
0409-0039 2
0409-0040 3
0409-0043 2 3
0409-0045 3
0410-0002 3
0410-0003 2 3
0410-0005 2 3
0410-0006 3
0410-0010 2 3
0410-0011 3
0410-0012 3
0410-0013 2 3
0410-0015 3
0410-0017 3
0410-0018 3
0414-0010 2
0414-0015 2 3
0414-0017 2 3
0414-0018 2 3
0414-0019 2 3
0414-0020 2 3
0414-0021 2 3
0415-0001 3
0415-0004 3 4
0415-0005 3 4
0415-0011 3
0415-0012 3
0415-0013 3 4
0415-0014 2 3
0415-0016 3
0415-0017 3
0415-0019 2 3
0415-0020 3
0415-0025 3
AE_HCxJonf-157 2 3
AE_HCXJonf-162 2 3
AE_HCXJonf-168 2 8
AE_HCxJonf-175 2 3
AE_HCxJonf-183 3
AE_HCxJonf-185 3
AE0118-237 2
AE0118-238 2 3
AE0118-239 2
AE0118-240 2 3
AE0118-243 2
AE0118-244 2
AE0118-245 2 3
AE0118-246 2
AE0118-249 2 3
AE0206-159 4
AE0206-160 4
AE0206-161 2 4
AE0206-162 2 3
AE0206-163 2 4
AE0206-164 4
AE0206-165 3 4
AE0206-167 2 3
AE0206-168 2 3
AE0206-169 2 3
AE0206-170 3 4
AE0210-146 4
AE0210-147 2 4
AE0210-149 4
AE0210-150 4
AE0210-151 4
AE0210-152 4
AE0210-153 4
AE0210-154 2 4
AE0210-157 4
AE0210-158 2 4
AE0210-159 2 4
AE0210-162 4
AE0210-163 2 4
AE0210-164 2 4
AE0210-165 2 4
AE0210-166 4
AE0210-168 4
AE0210-169 4
AE0210-170 2 4
AE0210-171 4
AE0210-172 2 4
AE0210-173 4
AE0210-174 2 4
AE0213-175 3 4
AE0213-176 3 4
AE0213-177 2 4
AE0213-178 3 4
AE0213-179 3 4
AE0213-180 3 4
AE0213-181 2 4
AE0213-182 3 4
AE0213-183 3 4
AE0213-186 2 4
AE0213-187 2 4
AE0213-190 2 4
AE0213-193 2 4
AE0213-194 2 4
AE0213-195 3 4
AE0213-196 2 4
AE0213-197 3 4
AE0213-198 2 4
AE0213-199 2 4
AE0213-200 2 4
AE0213-201 3 4
AE0213-202 3 4
AE0213-205 3 4
AE0213-206 3 4
AE0251-323 2 4
AE0251-325 2 4
AE0251-327 3 4
AE0251-329 3 4
AE0251-330 2 4
AE0251-331 2 3
AE0251-342 2 4
AE0251-343 2 4
AE0406-239 2 4
AE0406-254 2 4
AE0406-258 3
AE0406-259 3
AE0406-263 2 3
AE0406-264 3 4
AE0406-266 3
AE0406-271 2 3
AE0406-274 2 3
AE0406-278 3
AE0406-281 3
AE0406-286 2 4
AE0406-288 2 4
AE0406-289 2 3
AE0406-294 3
AE0406-298 2 3
Minneiska 2 4
NJ 303955 3
PRI 612-1 3 4
Arlet 2 3
Co-op 39 3
Pinova 2
Scired 2 4
Scifresh 3 4
0409-0025 2 3
0409-0026 3
0409-0027 2 3
0409-0031 3
0409-0033 2 3
0409-0047 2 3
G-14-050 2 3
G-14-052 2 3
G-14-054 2 3
G-14-055 2 3
G-14-056 2
G-14-057 2 3
G-14-059 2 3
G-14-060 2
G-14-061 2 3
G-14-062 2
G-14-064 2 3
G-14-065 2
G-14-069 2 3
G-14-067 2
G-14-068 2
G-14-071 2
G-14-073 2 3
G-14-074 2
G-14-075 2
G-14-076 2 3
G-14-077 2
G-14-078 2
G-14-080 2
G-09-232 2
G-09-233 2 4
G-09-234 2
G-09-235 3 4
G-09-236 3 4
G-09-237 2
G-09-238 3 4
G-09-239 2 4
G-09-240 2
G-09-241 2
G-09-242 2 4
G-09-243 2
G-09-245 2 4
G-09-246 3 4
G-09-258 2 3
G-09-259 2
G-09-260 3 4
G-09-261 2 4
G-09-262 2
G-09-263 2 3
G-09-264 2
G-09-265 2 3
G-09-266 2
G-09-267 2 3
G-09-268 2 4
0408-0021 3
Wijcik McIntosh 2 4
Beauty of Bath 2 9
Priam 3
Northern Spy 2 3
Co-op 15 2 3
MN 1702 2 3
WA 2 2 4
WA 5 2 3
Pitmaston Pineapple 2
0411-0011 3 4
0411-0017 3
0411-0023 3
AE0250-086 3 4
AE0250-087 3 4
AE0250-089 2 3
AE0250-090 2 3
AE0250-092 2 4
AE0250-093 2 4
AE0250-094 2 4
AE0250-095 2 3
Sonya 2 4
Co-op 38 3 4
AE0250-096 2 3
AE0250-327 3
Co-op 30 3 4
Jonagrimes 2
AE0211-036 2 4
G-07-039 3 4
PRI 14-152 3
PRI 47-176 3 4
G-07-041 2 4
BC-8S-27-43 2 4
AE0250-091 2 4
AE0250-097 2 4
AE0250-325 2 4
AE0250-326 3 4
AE0250-329 2 4
AE0250-333 2 4
AE0250-334 2 4
AE0250-335 3 4
AE0250-336 2 4
AE0250-338 3 4
AE0250-341 2 4
AE0211-038 3 4
AE0211-043 2
AE0211-045 2 4
AE0211-051 2 4
G-07-010 3
G-07-014 3 4
G-07-015 3
G-07-019 3
G-07-020 3
G-07-024 3 4
G-07-032 3
G-07-033 3 4
G-07-034 3 4
G-07-035 3 4
G-07-044 3
AE0211-053 2 3
AE0211-054 3
AE0250-088 2 3
AE0250-324 2 3
AE0250-328 3
AE0250-331 3
AE0250-332 2 4
AE0250-337 3 4
AE0250-339 2 3
Minnewashta 3 4
Autumn Crisp 2 3
G-14-066 2
Lu1-11-010 2 4
Lu1-11-013 2
Lu1-11-016 2
Lu1-11-017 2 4
Lu1-11-018 2 4
NJ 90 3 4
Lord Lambourne 2 4
Antonovka GH 2 4
Grimes Golden 2 3
Kidds Orange Red 3 4
Malus baccata Hansen #2 2 8
Malus baccata Jackii 2
Summerred 3 7
William's Pride 2
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Mdo-HB-16-31Apple-RosBREED-3.9K-20191641.9141.91
Projects
Project Name
RosBREED_Apple_CRS_Haplotype_2020
Alignments
Feature NameTypeLocationAnalysis
Chr16 chromosome Chr16:13272116..13277127. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation