Mdo-HB-15-14

Haplotype Block Overview
Name Mdo-HB-15-14
Species Malus x domestica
Stock Haplotype [view all 428]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Cox's Orange Pippin 4 6
Rome Beauty Law 4 6
Jonafree 4 6
Redfree 4 5
Spartan 10 6
Wagener 4 6
Worcester Pearmain 4
Tsugaru 4 5
Golden Delicious 4
Fuji 4 6
Empire 6
Gala 4 6
Honeycrisp 4
Elstar 4 6
Marshall McIntosh 10 6
Cripps Pink 4
Granny Smith 4 5
Jonathan 4 5
Ralls Janet 3 4
Delicious 6 9
Discovery 4 5
Prima 4
821 4 6
Fiesta 4 6
Ingrid Marie 6
Idared 5 6
Esopus Spitzenburg 4 6
Braeburn 6
Sansa 4 6
Lodi 6
James Grieve 4 6
Cripps Red 4 5
Burgundy 5 6
Akane 4
Ambrosia 4 6
Aurora Golden Gala 4 6
Beacon 4 5
Ben Davis 4 6
Cameo 4 9
Chinook 4
Clivia 6
Co-op 17 5 6
Co-op 18 4 6
Dayton 4 6
Delblush 4 6
Delcorf 4
Delorgue 4
Dolgo 4 6
Geheimrat Dr. Oldenburg 5 6
Duchess of Oldenburg 5 6
Early Cortland 6
Empress 4 5
F2 26829-2-2 6
Fantazja 4 6
Fireside 4 6
Fortune 6
Frostbite 4
Ginger Gold 4 6
GMAL 4327 5 6
GMAL 4328 4 5
GMAL 4329 5 6
GMAL 4332 5 6
Goodland 4 5
Haralson 5
Honeygold 4 5
Hudson 6
Jersey Black 3 5
Jonamac 10 5
Keepsake 4 6
Kerr 4 5
Lady Williams 4 5
Liberty 10 5
Linda 4 6
Liveland Raspberry 4 6
Longfield 4
Macoun 10 5
Malinda 4 5
Mantet 12 4
Melba 4 6
MN 1627 4 6
MN 1628 4
MN 1691 4
MN 1706 4 9
MN 1708 4 6
MN 1760 4 6
MN 1764 4 6
MN 1789 4
MN 1802 4
MN 1836 4 6
MN 1837 4
MN 1839 4 6
MN 1888 4 6
MN 1899 4 5
MN 1940 4 5
MN 2016 4 6
AA-44 5 6
Monroe 5 6
Montgomery 6
Nicola 4 6
NJ 31 4
NJ 53 4 5
Oriole 5 6
PRI 14-126 4 6
PRI 14-510 4 6
PRI 16-144 4 6
PRI 1661-2 10 6
PRI 54-12 5 6
PRI 855-102 6
Primula 4 6
Raritan 4 6
Regent 10 5
Russian Seedling 4 6
Sawa 4
Sciros 4 6
Sharon 5 6
Silken 4 6
Wildung 6
Splendour 4 6
State Fair 4 5
NJ 55 4
Co-op 29 4 6
Sunrise 4 6
Sweet Sixteen 4 6
Topaz 4
Vista Bella 4 6
Wealthy 4 5
Winesap 6 8
Winter Banana 4 6
Yellow Newtown 5 6
Yellow Transparent 6
0407-0001 6
0407-0005 4
0407-0006 4 6
0407-0007 6
0407-0008 6
0408-0003 4
0408-0004 10 4
0408-0005 10 4
0408-0007 4
0408-0008 10 6
0408-0010 4 6
0408-0011 4 6
0408-0014 10 4
0408-0015 4 6
0409-0022 4 6
0409-0024 4 6
0409-0028 4 6
0409-0030 4
0409-0032 4
0409-0035 4
0409-0036 4
0409-0038 4
0409-0039 4 6
0409-0040 4
0409-0043 4
0409-0045 4 6
0410-0002 5 6
0410-0003 4
0410-0005 4 6
0410-0006 4
0410-0010 4 6
0410-0011 5 6
0410-0012 4 6
0410-0013 4
0410-0015 4 6
0410-0017 4 6
0410-0018 4 5
0414-0010 4 6
0414-0015 4
0414-0017 4
0414-0018 4
0414-0019 4
0414-0020 10 4
0414-0021 4
0415-0001 4
0415-0004 10 4
0415-0005 4
0415-0011 4
0415-0012 4
0415-0013 10 4
0415-0014 4 6
0415-0016 4
0415-0017 10 4
0415-0019 10 4
0415-0020 4
0415-0025 4
AE_HCxJonf-145 4
AE_HCXJonf-148 4 6
AE_HCxJonf-157 4 6
AE_HCXJonf-162 4 6
AE_HCXJonf-168 4 6
AE_HCxJonf-175 4
AE_HCxJonf-183 4 6
AE_HCxJonf-185 4 6
AE0118-237 4 5
AE0118-238 10 4
AE0118-239 4 6
AE0118-240 4 5
AE0118-243 4 5
AE0118-244 10 4
AE0118-245 4 5
AE0118-246 4 5
AE0118-249 4 5
AE0206-159 4 6
AE0206-160 4 6
AE0206-161 5 6
AE0206-162 4 6
AE0206-163 5 6
AE0206-164 4 5
AE0206-165 5 6
AE0206-167 4
AE0206-168 5 6
AE0206-169 5 6
AE0206-170 4
AE0210-146 4 5
AE0210-147 5 6
AE0210-149 4 5
AE0210-150 6
AE0210-151 4 6
AE0210-152 4 5
AE0210-153 4 6
AE0210-154 5 6
AE0210-157 4 5
AE0210-158 4 6
AE0210-159 4 6
AE0210-162 6
AE0210-163 6
AE0210-164 6
AE0210-165 5 6
AE0210-166 6
AE0210-168 4 6
AE0210-169 4 6
AE0210-170 5 6
AE0210-171 6
AE0210-172 4 5
AE0210-173 5 6
AE0210-174 5 6
AE0213-175 4 6
AE0213-176 5 6
AE0213-177 5 6
AE0213-178 4 6
AE0213-179 5 6
AE0213-180 5 6
AE0213-181 5 6
AE0213-182 4 5
AE0213-183 6
AE0213-186 6
AE0213-187 5 6
AE0213-190 5 6
AE0213-193 4 5
AE0213-194 4 5
AE0213-195 5 6
AE0213-196 4 6
AE0213-197 5 6
AE0213-198 6
AE0213-199 6
AE0213-200 6
AE0213-201 4 5
AE0213-202 4 6
AE0213-205 5 6
AE0213-206 4 6
AE0251-323 6
AE0251-325 4 6
AE0251-327 4
AE0251-329 4
AE0251-330 6
AE0251-331 4 6
AE0251-342 4
AE0251-343 6
AE0406-239 4 6
AE0406-254 4
AE0406-258 4
AE0406-259 4
AE0406-263 4 6
AE0406-264 4
AE0406-266 4
AE0406-271 4 5
AE0406-274 4
AE0406-278 4
AE0406-281 4 6
AE0406-286 4
AE0406-288 4
AE0406-289 4 6
AE0406-294 4 6
AE0406-298 4 6
Minneiska 4 5
NJ 303955 4
PRI 612-1 6 9
Arlet 4 6
Co-op 39 4 5
Pinova 4 6
Scired 4 6
Scifresh 6
0409-0025 4 6
0409-0026 4 6
0409-0027 4
0409-0031 4
0409-0033 4
0409-0047 4 6
G-14-050 6
G-14-052 4 6
G-14-054 6
G-14-055 6
G-14-056 4 6
G-14-057 4 6
G-14-059 6
G-14-060 6
G-14-061 6
G-14-062 6
G-14-064 4 6
G-14-065 4 6
G-14-069 6
G-14-067 6
G-14-068 6
G-14-071 4 6
G-14-073 4 6
G-14-074 6
G-14-075 4 6
G-14-076 6
G-14-077 4 6
G-14-078 6
G-14-080 4 6
G-09-232 6
G-09-233 6
G-09-234 4 6
G-09-235 4 6
G-09-236 4 6
G-09-237 4 6
G-09-238 4 6
G-09-239 6
G-09-240 6
G-09-241 4 6
G-09-242 6
G-09-243 4 6
G-09-245 6
G-09-246 4 6
G-09-258 4 6
G-09-259 4 6
G-09-260 6
G-09-261 4 6
G-09-262 6
G-09-263 4 6
G-09-264 4 6
G-09-265 6
G-09-266 6
G-09-267 4 6
G-09-268 6
0408-0021 10 6
Wijcik McIntosh 16 4
Beauty of Bath 5
Priam 4 5
Northern Spy 4 6
Co-op 15 4 9
MN 1702 4
WA 2 4 6
WA 5 4
Pitmaston Pineapple 4 5
0411-0011 10 6
0411-0017 10 4
0411-0023 4
AE0250-086 4
AE0250-087 4
AE0250-089 4 6
AE0250-090 4 6
AE0250-092 4 6
AE0250-093 6
AE0250-094 4 6
AE0250-095 4 6
Sonya 4 6
Co-op 38 4 5
AE0250-096 4
AE0250-327 4
Co-op 30 10 4
Jonagrimes 3 6
AE0211-036 5 6
G-07-039 4 6
PRI 14-152 4 6
G-07-041 4 6
BC-8S-27-43 4 6
AE0250-091 4 5
AE0250-097 4 6
AE0250-325 4 6
AE0250-326 4 5
AE0250-329 4 5
AE0250-333 4 6
AE0250-334 4 6
AE0250-335 4 5
AE0250-336 4 5
AE0250-341 4 5
AE0211-038 4 5
AE0211-043 4 5
AE0211-051 5 6
G-07-010 4 5
G-07-014 4 5
G-07-015 5 6
G-07-020 5 6
G-07-024 5 6
G-07-032 4
G-07-033 4 6
G-07-034 5 6
G-07-035 5 6
G-07-044 4
AE0211-053 5 6
AE0211-054 5 6
AE0250-088 4
AE0250-324 4
AE0250-328 4 5
AE0250-331 4
AE0250-332 4 5
AE0250-337 4
AE0250-339 4 5
Minnewashta 4 5
Autumn Crisp 4 6
G-14-066 4 6
Lu1-11-010 4
Lu1-11-013 4 6
Lu1-11-016 4 6
Lu1-11-017 6
Lu1-11-018 4 6
NJ 90 10 6
Lord Lambourne 4
Antonovka GH 6
Grimes Golden 3 4
Kidds Orange Red 4 6
Malus baccata Hansen #2 4 6
Malus baccata Jackii 4
Summerred 17 6
William's Pride 5 6
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Mdo-HB-15-14Apple-RosBREED-3.9K-20191523.0723.1
Projects
Project Name
RosBREED_Apple_CRS_Haplotype_2020
Alignments
Feature NameTypeLocationAnalysis
Chr15 chromosome Chr15:8075471..8138968. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation