Mdo-HB-13-19

Haplotype Block Overview
Name Mdo-HB-13-19
Species Malus x domestica
Stock Haplotype [view all 427]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Cox's Orange Pippin 2
Rome Beauty Law 2 3
Jonafree 2
Redfree 2
Spartan 3 4
Wagener 2 3
Worcester Pearmain 2
Tsugaru 2 3
Golden Delicious 2
Fuji 2
Empire 3 4
Gala 2
Honeycrisp 3 4
Elstar 2
Marshall McIntosh 2 4
Cripps Pink 2 4
Granny Smith 2 4
Jonathan 3
Ralls Janet 2 4
Delicious 2 3
Discovery 2
Prima 2 3
821 5
Fiesta 2 3
Ingrid Marie 2
Idared 3
Esopus Spitzenburg 2 3
Braeburn 2 3
Sansa 2 3
Lodi 2
James Grieve 2 3
Cripps Red 2
Burgundy 3 4
Akane 2 3
Ambrosia 2
Aurora Golden Gala 2
Beacon 2 4
Ben Davis 2 3
Cameo 2 3
Chinook 2
Clivia 2
Co-op 17 2 5
Co-op 18 2
Dayton 2 3 5
Delblush 2
Delorgue 2 3
Dolgo 2 5
Geheimrat Dr. Oldenburg 2 4
Duchess of Oldenburg 3
Early Cortland 2 3
Empress 2 3
F2 26829-2-2 3 5
Fantazja 3 4
Fireside 2 3
Fortune 2 3
Frostbite 4
Ginger Gold 2
GMAL 4327 4 5
GMAL 4328 2 3
GMAL 4329 2 4
GMAL 4332 3 4
Goodland 2
Haralson 2 3
Honeygold 2 3
Hudson 2 3
Jersey Black 2
Jonamac 2 3
Keepsake 2 4
Lady Williams 2 4
Liberty 3 4
Linda 3 4
Longfield 2 5
Macoun 2 4
Malinda 2
Melba 2 4
Melrose 2 3
MN 1627 2 3
MN 1628 2 4
MN 1691 2 3
MN 1706 2
MN 1708 2 3
MN 1760 3
MN 1764 2 3
MN 1789 2 3
MN 1802 2 4
MN 1836 2
MN 1837 2
MN 1839 2
MN 1888 2 3
MN 1899 2 4
MN 1940 2
MN 2016 3 4
AA-44 2 3
Monroe 3
Montgomery 2
Nicola 2
NJ 31 2
NJ 53 2 3
Oriole 2 3
PRI 14-126 2 5
PRI 14-510 2 3
PRI 16-144 2
PRI 1661-2 2 4
PRI 54-12 3
PRI 855-102 2
Primula 2
Raritan 2 4
Regent 2 4
Russian Seedling 2 3
Sawa 2 3
Sciros 2
Sharon 2 3
Silken 3 4
Wildung 2 3
Splendour 2
State Fair 2 4
NJ 55 2
Co-op 29 2 3
Sunrise 2 4
Sweet Sixteen 2 4
Topaz 2
Vista Bella 2 3
Wealthy 3
Winesap 3
Winter Banana 2 3
Yellow Newtown 2
Yellow Transparent 2
0407-0001 2 3
0407-0005 2
0407-0006 2
0407-0007 2
0407-0008 2
0408-0003 2
0408-0004 2 5
0408-0005 2
0408-0007 2 5
0408-0008 2
0408-0010 2
0408-0011 2
0408-0014 2 5
0408-0015 2
0409-0022 2 3
0409-0024 2 3
0409-0028 2 4
0409-0030 2 3
0409-0032 2 4
0409-0035 2 3
0409-0036 2 4
0409-0038 2 3
0409-0039 2 4
0409-0040 2 4
0409-0043 2 4
0409-0045 2 3
0410-0002 2
0410-0003 2 4
0410-0005 2 4
0410-0006 2 4
0410-0010 2
0410-0011 2 4
0410-0012 2 4
0410-0013 2 4
0410-0015 2 4
0410-0017 2
0410-0018 2
0414-0010 2 3
0414-0015 2 3
0414-0017 2 3
0414-0018 3 5
0414-0019 2 4
0414-0020 2 3
0414-0021 3
0415-0001 2 3
0415-0004 2 3
0415-0005 2 4
0415-0011 3 5
0415-0012 2 4
0415-0013 2 3
0415-0014 2 3
0415-0016 2 3
0415-0017 2 4
0415-0019 2 3
0415-0020 2 4
0415-0025 2 4
AE_HCxJonf-145 2 4
AE_HCXJonf-148 2 3
AE_HCxJonf-157 2 3
AE_HCXJonf-162 2 4
AE_HCXJonf-168 2 3
AE_HCxJonf-175 2 4
AE_HCxJonf-183 2 3
AE_HCxJonf-185 2 4
AE0118-237 4
AE0118-238 3 4
AE0118-239 2 4
AE0118-240 3 4
AE0118-243 2 4
AE0118-244 2 3
AE0118-245 2 4
AE0118-246 4
AE0118-249 2 4
AE0206-159 2 4
AE0206-160 2 4
AE0206-161 2
AE0206-162 2
AE0206-163 2 4
AE0206-164 2
AE0206-165 2 4
AE0206-167 2
AE0206-168 2 4
AE0206-169 2 4
AE0206-170 2 4
AE0210-146 2 4
AE0210-147 4
AE0210-149 2 4
AE0210-150 2
AE0210-151 4
AE0210-152 4
AE0210-153 4
AE0210-154 4
AE0210-157 2 4
AE0210-158 2
AE0210-159 2 4
AE0210-162 2 4
AE0210-163 4
AE0210-164 4
AE0210-165 2 4
AE0210-166 4
AE0210-168 2 4
AE0210-169 2 4
AE0210-170 2
AE0210-171 4
AE0210-172 2
AE0210-173 2 4
AE0210-174 2 4
AE0213-175 2 3
AE0213-176 2 3
AE0213-177 2 4
AE0213-178 2 4
AE0213-179 2 3
AE0213-180 2 3
AE0213-181 2 4
AE0213-182 2 4
AE0213-183 2 4
AE0213-186 2 3
AE0213-187 2 4
AE0213-190 2 3
AE0213-193 2 4
AE0213-194 2 4
AE0213-195 2 3
AE0213-196 2 4
AE0213-197 2 3
AE0213-198 2 4
AE0213-199 2 3
AE0213-200 2 3
AE0213-201 2 3
AE0213-202 2 3
AE0213-205 2 3
AE0213-206 2 4
AE0251-323 2
AE0251-325 2 4
AE0251-327 2 4
AE0251-329 2
AE0251-330 2
AE0251-331 2 4
AE0251-342 2 4
AE0251-343 2
AE0406-239 3 4
AE0406-254 3
AE0406-258 4
AE0406-259 4
AE0406-263 4
AE0406-264 3 4
AE0406-266 4
AE0406-271 3
AE0406-274 3
AE0406-278 3 4
AE0406-281 3 4
AE0406-286 4
AE0406-288 3 4
AE0406-289 4
AE0406-294 3 4
AE0406-298 4
Minneiska 4
NJ 303955 2
PRI 612-1 2
Arlet 2 3
Co-op 39 3
Pinova 2
Scired 2
Scifresh 2
0409-0025 2 3
0409-0026 2 3
0409-0027 2 4
0409-0031 2 3
0409-0033 2 3
0409-0047 2 3
G-14-050 2
G-14-052 2
G-14-054 2
G-14-055 2
G-14-056 2
G-14-057 2
G-14-059 2
G-14-060 2
G-14-061 2
G-14-062 2
G-14-064 2
G-14-065 2
G-14-069 2
G-14-067 2
G-14-068 2
G-14-071 2
G-14-073 2
G-14-074 2
G-14-075 2
G-14-076 2
G-14-077 2
G-14-078 2
G-14-080 2
G-09-232 2
G-09-233 2
G-09-234 2 3
G-09-235 2
G-09-236 2 3
G-09-237 2 3
G-09-238 2
G-09-239 2 3
G-09-240 2 3
G-09-241 2 3
G-09-242 2
G-09-243 2 3
G-09-245 2
G-09-246 2 3
G-09-258 2
G-09-259 2
G-09-260 2
G-09-261 2
G-09-262 2
G-09-263 2 3
G-09-264 2
G-09-265 2
G-09-266 2
G-09-267 2 3
G-09-268 2
0408-0021 2
Wijcik McIntosh 2 4
Beauty of Bath 2
Priam 2 3
Northern Spy 2
Co-op 15 2
MN 1702 2 4
WA 2 2
WA 5 2
Pitmaston Pineapple 2 3
0411-0011 2 3
0411-0017 2 3
0411-0023 2
AE0250-086 2 4
AE0250-087 2 4
AE0250-089 2 4
AE0250-090 2
AE0250-092 2
AE0250-093 2 4
AE0250-094 2
AE0250-095 2
Sonya 2
Co-op 38 2
AE0250-096 2 3
AE0250-327 3 5
Co-op 30 2 5
Jonagrimes 3
AE0211-036 2
G-07-039 2 4
PRI 14-152 2 5
PRI 47-176 3
G-07-041 2 3
BC-8S-27-43 2
AE0250-091 4
AE0250-097 3 4
AE0250-325 4
AE0250-326 3 4
AE0250-329 4 5
AE0250-333 3 5
AE0250-334 4
AE0250-335 4 5
AE0250-336 3 5
AE0250-338 3 5
AE0250-341 3 5
AE0211-038 2
AE0211-043 2
AE0211-045 2 3
AE0211-051 2
G-07-010 3 4
G-07-014 3 4
G-07-015 2 4
G-07-019 2 4
G-07-020 3 4
G-07-024 3 4
G-07-032 2 3
G-07-033 2 4
G-07-034 2 4
G-07-035 2 4
G-07-044 2 4
AE0250-088 4
AE0250-324 2 3
AE0250-328 4
AE0250-331 3 4
AE0250-332 3 4
AE0250-337 4
AE0250-339 3 4
Minnewashta 2 4
Autumn Crisp 2 3
G-14-066 2
Lu1-11-010 2
Lu1-11-013 2
Lu1-11-016 2
Lu1-11-017 2
Lu1-11-018 2
NJ 90 3 4
Lord Lambourne 2
Antonovka GH 4
Grimes Golden 2 3
Kidds Orange Red 2
Malus baccata Hansen #2 2
Malus baccata Jackii 5
Summerred 2
William's Pride 2
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Mdo-HB-13-19Apple-RosBREED-3.9K-20191323.7523.75
Projects
Project Name
RosBREED_Apple_CRS_Haplotype_2020
Alignments
Feature NameTypeLocationAnalysis
Chr13 chromosome Chr13:7590905..7595890. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation