Mdo-HB-13-18

Haplotype Block Overview
Name Mdo-HB-13-18
Species Malus x domestica
Stock Haplotype [view all 429]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Cox's Orange Pippin 10 7
Rome Beauty Law 3 6
Jonafree 2 6
Redfree 2 7
Spartan 4 6
Wagener 2 4
Worcester Pearmain 6 7
Tsugaru 2
Golden Delicious 2
Fuji 2 7
Empire 4 6
Gala 2 7
Honeycrisp 3 5
Elstar 2 7
Marshall McIntosh 2 6
Cripps Pink 2 6
Granny Smith 2 6
Jonathan 2 4
Ralls Janet 6 7
Delicious 2 4
Discovery 10 7
Prima 4 7
821 4
Fiesta 4 7
Ingrid Marie 10 7
Idared 4
Esopus Spitzenburg 2
Braeburn 2 4
Sansa 2
Lodi 10 2
James Grieve 4 7
Cripps Red 2
Burgundy 3 6
Akane 2 6
Ambrosia 2
Aurora Golden Gala 2
Beacon 2 6
Ben Davis 10 2 4
Cameo 2 4
Chinook 2 7
Clivia 2 7
Co-op 17 2 4
Co-op 18 3 5
Dayton 2 4 7
Delblush 2
Delorgue 3 6
Dolgo 4 6
Geheimrat Dr. Oldenburg 2 6
Duchess of Oldenburg 3 4
Early Cortland 2 4
Empress 2 4
F2 26829-2-2 4
Fantazja 2 6
Fireside 2
Fortune 2 4
Frostbite 5 6
Ginger Gold 2
GMAL 4327 3 6
GMAL 4328 2 4
GMAL 4329 3 6
GMAL 4332 2 4
Goodland 2 6
Haralson 2 3
Honeygold 2 3
Hudson 2 4
Jersey Black 10 7
Jonamac 2 4
Keepsake 2 5
Kerr 3 6
Lady Williams 2 6
Liberty 3 6
Linda 2 6
Longfield 24 3
Macoun 10 6
Malinda 10 2
Mantet 6
Melba 2
MN 1627 2 3
MN 1628 2 6
MN 1691 2 6
MN 1706 2
MN 1708 2 3
MN 1760 2
MN 1764 2
MN 1789 3 6
MN 1802 2 6
MN 1836 2
MN 1837 2 6
MN 1839 2
MN 1888 2
MN 1899 2 5
MN 1940 2 6
MN 2016 4 6
AA-44 2 4
Monroe 2 3
Montgomery 10 2
Nicola 2
NJ 31 6
NJ 53 4 7
Oriole 2
PRI 14-126 2 4
PRI 14-510 2 4
PRI 16-144 2 4
PRI 1661-2 2 6
PRI 54-12 3 4
PRI 855-102 2
Primula 2
Raritan 24 25
Regent 2 6
Russian Seedling 2 4
Sawa 2
Sciros 2
Sharon 2 4
Silken 3 6
Wildung 2 4
Splendour 2
State Fair 2 6
NJ 55 2 7
Co-op 29 2 4
Sunrise 2 6
Sweet Sixteen 2 5
Topaz 2 7
Vista Bella 4 7
Wealthy 2 3
Winesap 4
Winter Banana 2 4
Yellow Newtown 2
Yellow Transparent 10
0407-0001 2 4
0407-0005 2
0407-0006 2
0407-0007 2
0407-0008 2
0408-0003 2
0408-0004 2 4
0408-0005 2
0408-0007 2 4
0408-0008 2
0408-0010 2
0408-0011 2
0408-0014 2 4
0408-0015 2
0409-0022 2 3
0409-0024 2 3
0409-0028 2 5
0409-0030 2 3
0409-0032 2 5
0409-0035 2 3
0409-0036 2 5
0409-0038 2 3
0409-0039 2 5
0409-0040 2 5
0409-0043 2 5
0409-0045 2 3
0410-0002 2
0410-0003 2 6
0410-0005 2 6
0410-0006 2 6
0410-0010 2
0410-0011 2 6
0410-0012 2 6
0410-0013 2 6
0410-0015 2 6
0410-0017 2
0410-0018 2
0414-0010 2 3
0414-0015 2 3
0414-0017 2 3
0414-0018 3 4
0414-0019 2 5
0414-0020 2 3
0414-0021 3 4
0415-0001 2 3
0415-0004 2 3
0415-0005 2 5
0415-0011 3 4
0415-0012 2 5
0415-0013 2 3
0415-0014 3 7
0415-0016 2 3
0415-0017 2 5
0415-0019 2 3
0415-0020 2 5
0415-0025 2 5
AE_HCxJonf-145 2 5
AE_HCXJonf-148 2 3
AE_HCxJonf-157 2 3
AE_HCXJonf-162 5 6
AE_HCXJonf-168 2 3
AE_HCxJonf-175 2 5
AE_HCxJonf-183 3 6
AE_HCxJonf-185 5 6
AE0118-237 5 6
AE0118-238 3 6
AE0118-239 2 5
AE0118-240 3 6
AE0118-243 2 5
AE0118-244 2 3
AE0118-245 2 5
AE0118-246 5 6
AE0118-249 2 5
AE0206-159 6 7
AE0206-160 6 7
AE0206-161 2 6
AE0206-162 2 6
AE0206-163 6 7
AE0206-164 6 7
AE0206-165 2 6
AE0206-167 2 6
AE0206-168 2 6
AE0206-169 6 7
AE0206-170 6 7
AE0210-146 3 6
AE0210-147 6
AE0210-149 2 6
AE0210-150 2 3
AE0210-151 6
AE0210-152 6
AE0210-153 6
AE0210-154 6
AE0210-157 3 6
AE0210-158 2 3
AE0210-159 6
AE0210-162 3 6
AE0210-163 6
AE0210-164 6
AE0210-165 2 6
AE0210-166 6
AE0210-168 3 6
AE0210-169 3 6
AE0210-170 2 3
AE0210-171 6
AE0210-172 2 3
AE0210-173 2 6
AE0210-174 3 6
AE0213-175 2 4
AE0213-176 2 4
AE0213-177 2
AE0213-178 2
AE0213-179 2 4
AE0213-180 2 4
AE0213-181 2
AE0213-182 2
AE0213-183 2
AE0213-186 2 4
AE0213-187 2
AE0213-190 2 4
AE0213-193 2
AE0213-194 2
AE0213-195 2 4
AE0213-196 2
AE0213-197 2 4
AE0213-198 2 6
AE0213-199 2 4
AE0213-200 2 4
AE0213-201 2 4
AE0213-202 2 4
AE0213-205 2 4
AE0213-206 2
AE0251-323 2
AE0251-325 2 5
AE0251-327 5 7
AE0251-329 2 7
AE0251-330 2 7
AE0251-331 2 5
AE0251-342 2 5
AE0251-343 2
AE0406-239 3 5
AE0406-254 3
AE0406-258 5 6
AE0406-259 5 6
AE0406-264 3 6
AE0406-266 5 6
AE0406-271 3
AE0406-274 3
AE0406-278 3 6
AE0406-281 3 5
AE0406-286 5 6
AE0406-288 3 6
AE0406-289 5 6
AE0406-294 3 6
AE0406-298 5 6
Minneiska 5 6
NJ 303955 7
PRI 612-1 2
Arlet 2 4
Co-op 39 10 24
Pinova 2 7
Scired 2 7
Scifresh 2
0409-0025 2 3
0409-0026 2 3
0409-0027 2 5
0409-0031 2 3
0409-0033 2 3
0409-0047 2 3
G-14-050 2 7
G-14-052 2
G-14-054 2 7
G-14-055 2 7
G-14-056 2 7
G-14-057 2
G-14-059 2 7
G-14-060 2 7
G-14-061 2 7
G-14-062 2 7
G-14-064 2 7
G-14-065 2 7
G-14-069 2
G-14-067 2 7
G-14-068 2 7
G-14-071 2 7
G-14-073 2 7
G-14-074 2 7
G-14-075 2 7
G-14-076 2 7
G-14-077 2
G-14-078 2
G-14-080 2 7
G-09-232 2
G-09-233 2
G-09-234 2 4
G-09-235 2
G-09-236 2 4
G-09-237 2 4
G-09-238 2
G-09-239 2 4
G-09-240 2 4
G-09-241 2 4
G-09-242 2
G-09-243 2 4
G-09-245 2
G-09-246 2 4
G-09-258 2
G-09-259 2
G-09-260 2
G-09-261 2
G-09-262 2
G-09-263 2 4
G-09-264 2
G-09-265 2
G-09-266 2
G-09-267 2 4
G-09-268 2
0408-0021 2
Wijcik McIntosh 3 5
Beauty of Bath 10
Priam 2
Northern Spy 2 6
Co-op 15 2
MN 1702 2 5
WA 2 2 7
WA 5 2
Pitmaston Pineapple 2 4
0411-0011 2 4
0411-0017 2 4
0411-0023 2
AE0250-086 5 7
AE0250-087 5 7
AE0250-089 5 7
AE0250-090 2 7
AE0250-092 2
AE0250-093 2 5
AE0250-094 2 7
AE0250-095 2
Sonya 2 7
Co-op 38 2
AE0250-096 2 6
AE0250-327 2 4
Co-op 30 2 4
Jonagrimes 3 4
AE0211-036 10 2
G-07-039 2 6
PRI 14-152 2 4
PRI 47-176 4
G-07-041 2
BC-8S-27-43 2 7
AE0250-091 5 6
AE0250-097 3 6
AE0250-325 5 6
AE0250-326 3 6
AE0250-329 3 5
AE0250-333 3
AE0250-334 5 6
AE0250-335 3 5
AE0250-336 3
AE0250-338 3
AE0250-341 3
AE0211-038 2
AE0211-043 2
AE0211-045 2 4
AE0211-051 2
G-07-010 2 6
G-07-014 2 6
G-07-015 2 6
G-07-019 2 6
G-07-020 2 6
G-07-024 2 6
G-07-032 2
G-07-033 2 6
G-07-034 2 6
G-07-035 2 6
G-07-044 2 6
AE0211-053 2 6
AE0211-054 2 6
AE0250-088 5 6
AE0250-324 3 6
AE0250-328 5 6
AE0250-331 3 6
AE0250-332 3 6
AE0250-337 5 6
AE0250-339 3 6
Minnewashta 6
Autumn Crisp 2 3
G-14-066 2 7
Lu1-11-010 2 7
Lu1-11-013 2 7
Lu1-11-016 2 7
Lu1-11-017 2 7
Lu1-11-018 2 7
NJ 90 4 6
Lord Lambourne 7
Antonovka GH 6
Grimes Golden 2 3
Kidds Orange Red 2 7
Malus baccata Hansen #2 2 25
Malus baccata Jackii 4
Summerred 19 3
William's Pride 2
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Mdo-HB-13-18Apple-RosBREED-3.9K-20191323.3923.39
Projects
Project Name
RosBREED_Apple_CRS_Haplotype_2020
Haplotypes
Alignments
Feature NameTypeLocationAnalysis
Chr13 chromosome Chr13:7560054..7588857. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation