Pav-HB-06-25

Haplotype Block Overview
Name Pav-HB-06-25
Species Prunus avium
Stock Haplotype [view all 512]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Summit 7 8
Lambert 2 3
Regina 2 8
Ambrunes 2 5
Lapins 3 8
Stella 2 3
Sweetheart 3 9
Van 8 9
Schneiders 15 2
Bing 2 3
Rainier 3 8
5.18.25-001 14 9
5.3.1-001 2 8
5.3.1-002 2
Benton 3 4
Brooks 4 8
Cashmere 2 4
Chelan 2 4
Chinook 3 8
Cowiche 11 4
Gil Peck 2 8
Glacier 3 4
Kiona 2 4
Mildew Immune Mazzard #17 16 7
Mildew Immune Mazzard #23 16 7
Newstar 3 9
NY 54 17 18
PMR-1 3 4
Sato Nashiki 18 2
Schmidt 19 20
Selah 2 3
Tieton 2 4
Ulster 2 8
Vic 20 3
Windsor 11 9
23_1_47 18 2
23_2_46 17 3
23_3_24 17 3
23_3_28 18 3
23_3_40 18 3
23_5_17 18 3
23_8_24 17 2
23_8_45 18 3
4.10.19-001 2 8
4.10.19-002 4 8
4.10.19-003 3 4
4.10.19-004 2 8
4.10.19-005 2 8
4.10.19-006 3 4
4.10.19-008 2 8
4.10.19-009 3 4
4.10.19-010 2 8
4.10.19-011 4 8
4.10.2-001 5 8
4.10.2-002 3 5
4.10.2-004 2 3
4.10.2-005 5 8
4.10.2-006 2 3
4.10.2-009 5
4.10.2-010 5 8
4.10.5-001 4
4.10.5-002 4 8
4.10.5-003 2
4.10.5-004 2 8
4.10.5-005 3
4.10.5-006 2 3
4.10.5-015 3
4.10.5-016 2 8
4.10.5-018 8
4.10.5-019 4 8
4.10.5-020 4 8
4.10.5-028 2 8
4.10.5-029 2 8
4.10.5-030 2 3
4.16.2-001 2 5
4.18.15-001 2 3
4.18.15-002 2 8
4.18.15-003 2 8
4.18.15-004 2 8
4.18.15-005 2 8
4.18.15-006 2 8
4.18.15-007 2 3
4.18.15-009 2 8
4.18.15-011 2 8
4.18.15-012 2 8
4.18.15-013 2 3
4.18.15-014 2
4.18.15-015 2 8
4.18.15-016 2 8
4.18.15-028 2 8
4.18.15-030 3
4.18.15-039 2 8
4.18.15-040 2 8
4.18.15-043 2 8
4.18.2-005 2 8
4.18.2-007 3 5
4.18.2-008 5 8
4.18.2-010 3
4.18.2-015 5 8
4.18.2-016 2 8
4.18.2-018 5 8
4.18.2-019 2 8
4.18.2-020 5 8
4.18.2-024 5 8
4.18.2-027 5 8
4.18.2-028 5 8
5.12.5-005 2 4
5.12.5-007 2 4
5.12.5-008 2 4
5.12.5-010 2
5.12.5-011 2
5.12.5-019 11 4
5.12.5-020 2 4
5.12.5-021 2
5.12.5-022 2
5.14.15-003 2 3
5.14.15-004 2 3
5.14.15-005 2 8
5.14.15-006 2 3
5.14.15-007 2 3
5.14.15-013 2
5.14.15-014 2 3
5.14.15-015 2 8
5.14.15-016 2 8
5.14.15-017 2 8
5.14.15-018 2 8
5.14.15-019 2 3
5.14.15-020 2 8
5.14.23-003 3 8
5.14.23-004 3
5.14.23-006 3
5.23.15-001 3
5.23.15-002 4 8
5.23.2-001 3 5
5.23.2-002 3 5
5.23.2-003 2 4
5.28.15-001 2
5.28.15-002 11 2
5.28.15-003 11 2
5.28.15-004 11 2
5.28.15-005 11 2
5.28.15-006 2 4
5.28.15-007 11 2
5.28.15-008 11 2
5.28.15-009 2 4
5.28.15-010 2
5.28.15-011 2 4
5.28.15-012 2 4
5.28.15-013 2 4
5.28.37-001 4 7
5.28.37-002 11
5.28.37-003 4 7
5.28.37-004 11 7
5.28.37-005 11
5.28.37-008 11
5.28.37-009 4
5.28.37-010 11 7
5.28.37-011 11 7
5.28.37-012 2 3
5.4.15-004 3 8
5.4.15-005 3 8
6.14.2-006 3 5
6.14.2-007 3 5
6.14.2-008 3 5
6.14.2-009 13 8
6.14.2-010 2 3
6.14.2-011 2 8
6.14.2-012 3 5
6.14.2-013 14 3
6.14.2-015 5 8
6.29.49-001 16 3
6.29.49-002 16 3
6.29.49-003 16 4
6.29.49-005 4 7
6.29.49-007 4 7
6.29.49-008 4 7
6.30.49-009 16 3
6.30.49-011 16 4
6.30.49-012 16 4
6.30.49-013 16 3
6.30.49-014 3 7
6.30.49-015 4 7
6.30.49-016 7
6.30.49-017 16 4
6.31.49-003 4 7
6.31.49-004 7 8
6.31.49-005 4 7
6.31.49-006 16 4
6.31.49-007 7 8
6.31.49-009 16 8
6.31.49-010 7 8
6.31.49-011 16 8
6.31.49-012 16 8
6.31.49-013 7 8
6.31.49-014 16 8
6.31.49-015 16 4
6.32.49-032 3 7
6.32.49-033 16 4
6.32.49-034 16 4
6.32.49-035 3 7
6.32.49-037 16 3
6.32.49-038 4 7
6.32.49-039 16 4
6.32.49-040 16 3
6.32.49-041 16 3
6.33.49-001 16 3
6.33.49-002 16 8
6.33.49-003 16 8
6.33.49-004 3 7
23-01-11 3
23-02-34 18 3
23-03-13 17 3
23-03-23 18 3
23-03-48 17 2
23-03-56 18 3
23-06-04 18 3
23-06-23 17 3
23-07-26 18 2
23-08-55 17 3
Dzherlo 13 14
Olympus 2 8
PC 7146-16 3 4
Kordia 2 5
Cristobalina 12 5
Vittoria 2 23
FR20T047 2 4
FR13T004 3
FR13T071 2 4
FR31T121 23 3
FR32T087 6 8
FR32T088 3 6
FR32T093 7 8
FR20T045 11 2
FR26T117 2 8
FR29T115 16 3
PC 9816-005 4 8
PC 9816-023 4 8
PC 9816-041 3 4
PC 9816-059 3 4
PC 9816-083 3 4
PC 9816-103 4 8
PC 9816-105 3 4
PC 9816-106 4 8
PC 9816-112 4 8
PC 9816-078 3 9
PC 9819-005 4
PC 9819-031 4 8
PC 9819-038 3 8
PC 9814-025 2 4
PC 9814-078 3 4
PC 9814-103 2 4
PC 9814-026 3 4
PC 9814-028 3 4
PC 9814-055 3 4
PC 9814-062 2 4
PC 9814-063 2 4
PC 9814-068 3 4
PC 9814-071 2 4
PC 9814-076 2 4
PC 9819-034 2 4
PC 9816-042 29 8
Emperor Francis 2 3
Black Republican 3 8
Krupnoplodnaya 14 4
Early Burlat 10 4
Venus 11 2
Moreau 2 4
Index 2 3
Sunburst 3 7
6.14.6-008 3 5
FR02T062 2 8
FR02T063 2 8
5.14.23.001 3 8
6.16.44-005 2 4
6.23.44-001 3 4
6.23.44-002 3 4
6.23.55-006 3 4
6.23.6-002 3
6.16.44-001 3 7
6.16.44-002 2 7
6.16.44-003 2 6
6.28.44-001 11 6
6.28.44-002 11 7
6.4.44-003 3 7
6.4.44-004 2 7
6.4.44-006 2 7
6.4.44-007 3 6
6.4.44-009 2 6
6.4.44-010 3 7
6.4.45-001 2
4.3.1-004 2 3
4.3.1-009 2 3
5.3.1-008 3 5
5.3.1-010 3 5
5.3.1-015 3 5
5.3.1-016 3 5
5.3.1-017 3 5
6.30.50-002 2 3
6.14.6-003 3 4
6.28.45-001 11 2
FR09T089 2
6.12.45-001 2 5
6.12.45-002 2 5
6.12.45-003 2 5
6.12.45-004 12 4
6.12.45-005 2 5
6.12.45-007 2 5
6.12.45-008 12
6.12.45-009 2 5
6.12.45-010 12 4
6.14.45-001 3 5
6.14.45-003 3 5
6.14.45-004 3 5
6.14.45-005 3 5
6.14.45-006 3 5
6.14.45-007 12 3
6.14.45-008 12 3
6.14.45-009 3 5
6.28.45-002 12 4
6.14.6-001 14
6.14.6-002 14 8
6.14.6-004 14 8
6.14.6-005 14 8
6.14.6-006 14
6.14.6-007 14
6.14.6-010 14 3
6.23.6-004 13 3
6.23.6-005 14 4
6.23.6-007 13 3
6.23.6-008 13 3
6.23.6-012 13 4
6.28.44-005 11 3
6.28.55-006 3 4
6.28.55-007 4 42
6.23.6-001 4 43
6.23.6-006 11 3
6.23.6-009 4 9
6.4.44-001 3 49
6.4.6-001 3 8
FR04T029 3 8
FR08T074 4 8
6.28.55-002 3 4
FR01T050 2 8
5.10.25-001 3 4
5.10.25-002 4 8
5.16.25-002 14 3
5.16.25-003 3 4
5.16.25-004 3 4
5.16.25-005 2 4
5.16.25-009 3 4
5.16.25-010 14 3
5.16.25-013 3 4
5.18.25-005 3 4
4.3.1-008 2 8
5.3.1-005 3
FR09T037 3 8
6.29.50-001 16 3
6.29.50-002 16 3
6.29.50-003 3 7
6.29.50-004 16 3
6.29.50-005 16 4
6.29.50-007 16 3
6.29.50-008 16 3
6.30.50-004 16 3
6.30.50-005 16 3
6.31.50-001 16 4
6.31.50-002 16 8
6.31.50-003 16 8
6.31.50-004 16 4
6.31.50-005 7 8
6.32.50-001 4 7
6.32.50-002 3 7
6.32.50-003 4 7
6.32.50-004 16 3
6.32.50-005 16 3
6.32.50-006 3 7
6.32.50-007 16 3
6.32.50-008 16 3
6.33.50-001 16 8
5.10.26-001 3 4
5.10.26-002 2 8
5.10.26-003 3 4
5.10.26-004 3 4
5.10.26-005 3 4
5.10.26-007 2 8
5.10.26-008 2 3
5.13.26-001 2 4
5.13.26-002 2 3
5.13.26-003 2 4
5.13.26-004 2 3
5.13.26-005 2 3
5.13.26-006 2 3
5.13.26-007 2 3
5.13.26-009 2 3
5.14.26-001 2 3
5.14.26-002 2 3
5.14.26-003 2 8
5.16.26-001 3 4
5.16.26-002 3 4
5.16.26-003 2
5.16.40-001 3 4
5.18.26-001 4 9
5.18.26-002 4 9
FR06T097 4 9
FR07T026 4 9
6.28.44-003 11 3
AA 3 4
PC 9816-069 3 4
PC 9816-079 3 4
PC 9816-096 4 8
PC 9816-104 4 8
PC 9816-114 3 4
PC 9817-097 3 8
4.18.15-010 2 8
4.18.15-042 2 8
4.18.15-047 2 8
4.18.15-048 2 3
4.3.1-003 5
4.3.1-005 5 8
4.3.1-006 5 8
4.3.1-007 2 8
5.3.1-009 8
5.3.1-011 5 8
5.3.1-012 2 8
5.3.1-013 2 8
5.3.1-014 2 8
5.4.15-001 2 8
5.4.15-002 8
5.4.15-003 2 8
FR01T070 2 3
FR49T083 8
5.16.17-003 3
5.16.25-006 2 3
5.16.25-012 2 3
5.20.6-001 3 4
6.16.44-008 3
6.4.45-003 2 3
6.4.6-004 2 3
6.4.6-006 3
6.4.6-007 3
6.4.6-008 3
6.4.6-009 3 4
5.16.17-001 3 7
5.16.17-004 7
6.14.17-001 7
6.14.17-002 7 8
6.14.17-003 3 7
6.14.17-004 3
6.14.17-005 8
FR02T024 3 7
4.14.17-001 3 8
5.13.26-008 3
6.28.44-004 11 2
4.3.1-001 5 8
5.3.1-007 2 8
5.3.1-018 2 8
5.10.40-001 2 3
5.10.40-002 2 8
5.10.40-003 2 3
5.10.40-004 2 3
5.10.40-005 2 8
5.10.40-007 2
5.10.40-008 2
5.10.40-009 2 8
5.10.40-010 2 8
5.10.40-011 2 8
5.10.40-012 2 8
5.10.40-013 2
5.10.40-014 2 8
5.10.40-015 2 3
5.10.40-016 2 8
5.10.40-017 2 8
5.13.40-002 11 3
5.13.40-003 2 3
5.13.40-004 11 3
5.16.40-003 11 3
5.16.40-004 11 2
6.30.50-001 11 3
6.30.50-003 11 4
6.10.55-001 2 3
6.10.55-002 23 8
6.10.55-003 23 3
6.10.55-004 2 3
6.10.55-005 23 3
6.10.55-006 2 3
6.10.55-007 2 8
6.10.55-008 23 8
6.10.55-009 23 3
6.10.55-010 2 8
6.16.55-001 2 23
6.16.55-002 2 23
6.23.17-001 2 4
6.23.55-002 23 4
6.23.55-005 2 4
6.23.55-007 2 4
6.23.55-008 2 4
6.28.55-001 11 2
6.28.55-003 11 23
6.28.55-004 11 23
6.28.55-005 2 4
5.13.40-001 3 4
5.16.25-001 3 8
5.18.25-004 8 9
5.3.1-006 13 4
6.16.44-004 2 8
6.16.44-006 3 6
6.16.44-007 3
6.16.44-009 2 8
6.23.17-003 4 49
6.23.17-004 3
Bertiolle 6 7
Napoleon 2 3
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Pav-HB-06-25Sweet Cherry-RosBREED-1.6K-2019699.06100.51
Haplotypes
Marker 2345678910111213141516171819202122232425262728293031323334353637383940414243444546474849505152535455565758
RosBREED_snp_sweet_cherry_Pp6_24822456BBBBAABABBBBBABABBABAABBABBAB--BBBBBBBBBBBBBBBBBBBBBBBBAB
RosBREED_snp_sweet_cherry_Pp6_24914294BBAABAAAABABBAAABBABAABBABBAA--ABABABBAAAAAABBABAABBABAAB
RosBREED_snp_sweet_cherry_Pp6_25113415AABBAAAABAAAAAAABAAAAABAAAAAA--AAAABAAABAABBABAABAAAAABAA
RosBREED_snp_sweet_cherry_Pp6_25146440ABAAAAAAAAAABBAAABABAAABAABAA--ABAAAAAAAAABABBABABABABAAA
RosBREED_snp_sweet_cherry_Pp6_25429330ABBBBABABBAABBAABBABAABBBBBAA--BBBBBAAABBBBBBBBBABAABBBBA
RosBREED_snp_sweet_cherry_Pp6_25631852BAAAABABAABBBABBABA--BAAAAABB--AAAAABABBAAAAAAAABABBAAAAA
RosBREED_snp_sweet_cherry_Pp6_25713330ABAAABAAAABABABBABBBBAABABABA--ABBAAAAAABBBABBAAABBBBAAAA
RosBREED_snp_sweet_cherry_Pp6_26322018ABBAABAAAAABBABAABBBBBBAABBBABABABBBAAAABABBBBBAABBBABBAA
RosBREED_snp_sweet_cherry_Pp6_26373740ABBBBBBAABABABBBBBBBBBBABBBAA--BBBBBAAAABBBBBBBBABBBBBABB
RosCOS0548-072_snp_sweet_cherry_Pp6_25325556BBBBBAABBAABBBABBBABABBBBBBAB--ABBA--BABAABBBBBBBBABABBAB
RosCOS0548-123_snp_sweet_cherry_Pp6_25325607BBBBBAABBAABABABBBABABBBBBBAB--ABBABBBABAABBBBBBBBABBABAB
RosCOS1327-393_snp_sweet_cherry_Pp6_25119366AABBAAAABAAABAAABAAAAABAAAAAA--AAAABAAABAABBAABABAAAAABAA
RosCOS1327-478_snp_sweet_cherry_Pp6_25119451BBAABBBBABBBABBBABBBBBABBBBBB--BBBBABBBABBABABABABBBBBABB
Alignments
Feature NameTypeLocationAnalysis
Pp06 chromosome Pp06:28348766..29567829. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)