Pav-HB-05-3

Haplotype Block Overview
Name Pav-HB-05-3
Species Prunus avium
Stock Haplotype [view all 518]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Summit 3
Lambert 3
Regina 6 8
Ambrunes 5 6
Lapins 3
Stella 2 3
Sweetheart 3
Van 3 7
Schneiders 2 8
Bing 2 7
Rainier 2 3
5.18.25-001 2 3
5.3.1-001 2 3
5.3.1-002 2 3
Benton 2
Brooks 2 3
Cashmere 2
Chelan 3 4
Chinook 11 2
Cowiche 2 3
Gil Peck 11 2
Glacier 2
Kiona 2
Mildew Immune Mazzard #17 15 8
Mildew Immune Mazzard #23 15 8
Newstar 2 7
NY 54 18 5
PMR-1 3 4
Sato Nashiki 3 8
Schmidt 14 3
Selah 2
Tieton 2
Ulster 11 2
Vic 2 3
Windsor 2 6
23_1_47 18 2
23_2_46 2 5
23_3_24 3 5
23_3_28 3 5
23_3_40 18 2
23_5_17 18 2
23_8_24 3 5
23_8_45 3 5
4.10.19-001 2 3
4.10.19-002 2 3
4.10.19-003 2 3
4.10.19-004 2 3
4.10.19-005 3 8
4.10.19-006 2 3
4.10.19-008 2 3
4.10.19-009 2 3
4.10.19-010 2 3
4.10.19-011 2 3
4.10.2-001 3 5
4.10.2-002 3 5
4.10.2-004 3 6
4.10.2-005 3 5
4.10.2-006 3 5
4.10.2-008 3
4.10.2-009 3 6
4.10.2-010 3 5
4.10.5-001 3
4.10.5-002 3
4.10.5-003 3 4
4.10.5-004 3
4.10.5-005 3
4.10.5-006 3
4.10.5-015 3
4.10.5-016 3 4
4.10.5-018 3 4
4.10.5-019 3
4.10.5-020 3
4.10.5-028 3 4
4.10.5-029 3
4.10.5-030 3 7
4.16.2-001 2 5
4.18.15-001 3 8
4.18.15-002 3
4.18.15-003 3 6
4.18.15-004 3 6
4.18.15-005 3 6
4.18.15-006 3 8
4.18.15-007 3 7
4.18.15-009 3 6
4.18.15-011 3 6
4.18.15-012 3 6
4.18.15-013 3 6
4.18.15-014 3 8
4.18.15-015 3 6
4.18.15-016 3 8
4.18.15-028 3 6
4.18.15-030 3 6
4.18.15-039 3 6
4.18.15-040 3 6
4.18.15-043 3 8
4.18.2-005 3 6
4.18.2-007 3 5
4.18.2-008 3 5
4.18.2-010 3 5
4.18.2-015 3 5
4.18.2-016 3 6
4.18.2-018 3 6
4.18.2-019 3 5
4.18.2-020 3 6
4.18.2-024 3 6
4.18.2-027 3 5
4.18.2-028 3 5
5.12.5-005 2 3
5.12.5-007 2 3
5.12.5-008 2 4
5.12.5-009 2 4
5.12.5-010 2 4
5.12.5-011 2 4
5.12.5-019 2
5.12.5-020 2 3
5.12.5-021 2
5.12.5-022 2 3
5.14.15-003 3 6
5.14.15-004 3 8
5.14.15-005 2 6
5.14.15-006 2 6
5.14.15-007 2 6
5.14.15-013 2 6
5.14.15-014 3 6
5.14.15-015 2 6
5.14.15-016 2 6
5.14.15-017 3 6
5.14.15-018 2 6
5.14.15-019 2 6
5.14.15-020 3 8
5.14.23-003 2 3
5.14.23-004 2 3
5.14.23-006 2 3
5.23.15-001 2
5.23.15-002 2 8
5.23.2-001 2 6
5.23.2-002 2 6
5.23.2-003 2 5
5.28.15-001 2 8
5.28.15-002 3 8
5.28.15-003 3 8
5.28.15-004 3 8
5.28.15-005 3 8
5.28.15-006 3 8
5.28.15-007 2 6
5.28.15-008 3 6
5.28.15-009 2 6
5.28.15-010 2 8
5.28.15-011 2 8
5.28.15-012 3 8
5.28.15-013 3 8
5.28.37-001 3
5.28.37-002 2 3
5.28.37-003 3
5.28.37-004 2 3
5.28.37-005 3
5.28.37-008 2 3
5.28.37-009 3
5.28.37-010 3
5.28.37-011 3
5.28.37-012 2 3
5.4.15-004 7
5.4.15-005 7 8
6.14.2-006 2 6
6.14.2-007 2 5
6.14.2-008 3 6
6.14.2-009 14 2
6.14.2-010 3 5
6.14.2-011 3 5
6.14.2-012 3 6
6.14.2-013 2 3
6.14.2-015 3 6
6.29.49-001 15 3
6.29.49-002 4 8
6.29.49-003 15 3
6.29.49-005 4 8
6.29.49-007 15 4
6.29.49-008 15 3
6.30.49-009 2 8
6.30.49-011 4 8
6.30.49-012 15 2
6.30.49-013 15 2
6.30.49-014 4 8
6.30.49-015 8
6.30.49-016 15 4
6.30.49-017 4 8
6.31.49-003 3 8
6.31.49-004 15 4
6.31.49-005 3 8
6.31.49-006 15 3
6.31.49-007 15 3
6.31.49-009 15 3
6.31.49-010 15 4
6.31.49-011 3 8
6.31.49-012 4 8
6.31.49-013 15 3
6.31.49-014 3 8
6.31.49-015 15 3
6.32.49-032 15 2
6.32.49-033 4 8
6.32.49-034 2 8
6.32.49-035 2 8
6.32.49-037 2 8
6.32.49-038 15 2
6.32.49-039 15
6.32.49-040 4 8
6.32.49-041 2 8
6.33.49-001 15 4
6.33.49-002 4 8
6.33.49-003 3 8
6.33.49-004 15 4
23-01-11 2 5
23-02-34 2 5
23-03-13 18 3
23-03-23 3 5
23-03-48 18 2
23-03-56 3 5
23-06-04 18
23-06-23 2 5
23-07-26 18 3
23-08-55 18 3
Dzherlo 14 2
Olympus 3
PC 7146-16 2
Kordia 2
Cristobalina 2 8
Vittoria 2 6
FR20T047 2 4
FR13T004 3
FR13T071 2
FR31T121 2 3
FR32T087 2
FR32T088 2
FR32T093 2
FR20T045 3 6
FR26T117 3 7
FR29T115 2 8
PC 9816-005 3
PC 9816-023 3 4
PC 9816-041 2 4
PC 9816-059 2
PC 9816-083 2 4
PC 9816-103 3
PC 9816-105 3
PC 9816-106 3 4
PC 9816-112 2 4
PC 9816-078 3 7
PC 9819-005 3 4
PC 9819-031 4 7
PC 9819-038 3
PC 9814-025 2 4
PC 9814-078 2 3
PC 9814-103 4 7
PC 9814-105 2 4
PC 9814-026 2 3
PC 9814-028 2 3
PC 9814-055 2 3
PC 9814-062 4 7
PC 9814-063 2 3
PC 9814-068 2 4
PC 9814-071 2 4
PC 9814-076 3 7
PC 9819-034 2 4
PC 9816-042 2 27
Emperor Francis 2 3
Black Republican 3 7
Krupnoplodnaya 2
Early Burlat 2 8
Venus 2 8
Moreau 2 4
Index 2
Sunburst 3
6.14.6-008 2 6
FR02T062 3 5
FR02T063 3 5
5.14.23.001 2
6.16.44-005 2
6.23.44-001 2
6.23.44-002 2
6.23.55-006 2
6.23.55-010 2
6.23.6-002 2
6.23.6-003 2
6.16.44-001 2
6.16.44-002 2
6.16.44-003 2
6.28.44-001 2 3
6.28.44-002 2 3
6.4.44-003 2
6.4.44-004 2 7
6.4.44-006 2 7
6.4.44-007 2 7
6.4.44-009 2 7
6.4.44-010 2 7
6.4.45-001 2
4.3.1-004 2 7
4.3.1-009 2 7
5.3.1-008 2 7
5.3.1-010 2
5.3.1-015 2
5.3.1-016 2
5.3.1-017 2
6.30.50-002 2
6.14.6-003 2 3
6.28.45-001 3 4
FR09T089 2 4
6.12.45-001 2
6.12.45-002 2 8
6.12.45-003 2 8
6.12.45-004 2
6.12.45-005 2 8
6.12.45-007 2
6.12.45-008 2
6.12.45-009 2 8
6.12.45-010 2 8
6.14.45-001 2 8
6.14.45-003 3 8
6.14.45-004 3 8
6.14.45-005 2 3
6.14.45-006 2 3
6.14.45-007 2 3
6.14.45-008 3 8
6.14.45-009 2 3
6.28.45-002 2 8
6.14.6-001 2 3
6.14.6-002 14 2
6.14.6-004 2 3
6.14.6-005 14 3
6.14.6-006 2 3
6.14.6-007 2 3
6.14.6-010 2 3
6.23.6-004 14 2
6.23.6-005 2
6.23.6-007 2
6.23.6-008 2
6.23.6-012 2
6.28.44-005 3
6.28.55-006 2 4
6.28.55-007 3 4
6.23.6-001 2 3
6.23.6-006 2 3
6.23.6-009 2 7
6.4.44-001 2 7
6.4.6-001 2 4
FR04T029 2 7
FR08T074 20 3
6.28.55-002 2 3
FR01T050 2 3
5.10.25-001 2 3
5.10.25-002 2 3
5.16.25-002 2
5.16.25-003 2
5.16.25-004 2
5.16.25-005 2
5.16.25-009 2
5.16.25-010 2
5.16.25-013 2
5.18.25-005 2 3
4.3.1-008 2 3
5.3.1-005 2 3
FR09T037 3
6.29.50-001 15 3
6.29.50-002 4 8
6.29.50-003 4 8
6.29.50-004 4 8
6.29.50-005 15 3
6.29.50-007 15 4
6.29.50-008 15 4
6.30.50-004 15 4
6.30.50-005 15 2
6.31.50-001 4 8
6.31.50-002 15 3
6.31.50-003 15 3
6.31.50-004 15 3
6.31.50-005 15 3
6.32.50-001 4 8
6.32.50-002 15 4
6.32.50-003 8
6.32.50-004 2 8
6.32.50-005 15 2
6.32.50-006 15 4
6.32.50-007 2 8
6.32.50-008 15 2
6.33.50-001 3 8
5.10.26-001 2 3
5.10.26-002 3 4
5.10.26-003 3 4
5.10.26-004 3 4
5.10.26-005 3 4
5.10.26-007 3
5.10.26-008 2 3
5.13.26-001 3
5.13.26-002 3 4
5.13.26-003 4
5.13.26-004 2
5.13.26-005 2 3
5.13.26-006 2 3
5.13.26-007 2 4
5.13.26-009 4
5.14.26-001 2 4
5.14.26-002 2
5.14.26-003 2 3
5.16.26-001 2
5.16.26-002 2
5.16.26-003 2 4
5.16.40-001 2
5.18.26-001 3
5.18.26-002 3 4
FR06T097 3 4
FR07T026 3 4
6.28.44-003 2 3
AA 2 4
PC 9816-069 3 4
PC 9816-079 2 4
PC 9816-096 2 3
PC 9816-104 3 4
PC 9816-114 2 4
PC 9817-097 3 4
4.18.15-010 3 6
4.18.15-042 3 8
4.18.15-047 3 8
4.18.15-048 3 8
4.3.1-003 2 8
4.3.1-005 2 6
4.3.1-006 2 8
4.3.1-007 2 8
5.3.1-009 2
5.3.1-011 2 8
5.3.1-012 2 8
5.3.1-013 2 6
5.3.1-014 2 8
5.4.15-001 6 7
5.4.15-002 6 7
5.4.15-003 6 7
FR01T070 3 6
FR49T083 3 8
5.16.17-003 2
5.16.25-006 2
5.16.25-008 2
5.16.25-012 2
5.20.6-001 2
6.16.44-008 2
6.4.45-003 2 7
6.4.6-004 2
6.4.6-006 2 7
6.4.6-007 2
6.4.6-008 2
6.4.6-009 2
5.16.17-001 2 3
5.16.17-004 2 3
6.14.17-001 2 3
6.14.17-002 2 3
6.14.17-003 2 3
6.14.17-004 3
6.14.17-005 3
FR02T024 2 3
4.14.17-001 2 3
5.13.26-008 2 4
6.28.44-004 2
4.3.1-001 2 3
5.3.1-007 2 3
5.3.1-018 2 3
5.10.40-001 2 3
5.10.40-002 2 3
5.10.40-003 2 3
5.10.40-004 2 3
5.10.40-005 2 3
5.10.40-007 3 8
5.10.40-008 3 8
5.10.40-009 2 3
5.10.40-010 3 8
5.10.40-011 3 8
5.10.40-012 3 8
5.10.40-013 2 3
5.10.40-014 2 3
5.10.40-015 3 8
5.10.40-016 2 3
5.10.40-017 2 3
5.13.40-002 3 8
5.13.40-003 3 8
5.13.40-004 3 8
5.16.40-003 2
5.16.40-004 2
6.30.50-001 2 8
6.30.50-003 4 8
6.10.55-001 3 6
6.10.55-002 3 6
6.10.55-003 2 3
6.10.55-004 2 3
6.10.55-005 2 3
6.10.55-006 2 3
6.10.55-007 2 3
6.10.55-008 3 6
6.10.55-009 2 3
6.10.55-010 2 3
6.16.55-001 2
6.16.55-002 2 6
6.23.17-001 2 6
6.23.55-002 2 6
6.23.55-005 2
6.23.55-007 2
6.23.55-008 2
6.28.55-001 2 6
6.28.55-003 3 6
6.28.55-004 2 6
6.28.55-005 2 6
5.13.40-001 3
5.16.25-001 2
5.18.25-004 2 3
5.3.1-006 14 2
6.16.44-004 2 3
6.16.44-006 2
6.16.44-007 2
6.16.44-009 2 3
6.23.17-003 2
6.23.17-004 2
Bertiolle 2
Napoleon 2 3
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Pav-HB-05-3Sweet Cherry-RosBREED-1.6K-201954.435.64
Haplotypes
Marker 23456789101112131415161718192021222324252627
RosBREED_snp_sweet_cherry_Pp5_03731884AABBBAAAAAAAABAAB--ABBBBAB
RosBREED_snp_sweet_cherry_Pp5_03767786BBAABBBBBBBBBABBBBABAAABBB
RosBREED_snp_sweet_cherry_Pp5_03864042AAAABAAAAAAAAAAAAAAAAAABAB
RosBREED_snp_sweet_cherry_Pp5_04028824AAABAAAAAAAAAAAABAAABAAA--
RosBREED_snp_sweet_cherry_Pp5_04185595ABAAAAABABABBA--ABA--A-ABA
RosBREED_snp_sweet_cherry_Pp5_04302944BABBBBBABABAAB--BABBAA-BAB
RosBREED_snp_sweet_cherry_Pp5_04345439AAAAABAAAB--AABAAAAABAAAAA
RosBREED_snp_sweet_cherry_Pp5_04357749BBBBBABBBA--BBABBBBBBBBBBB
RosBREED_snp_sweet_cherry_Pp5_04755463ABBAAAB--BABAAAAABBABBBBBA
Alignments
Feature NameTypeLocationAnalysis
Pp05 chromosome Pp05:3732455..4756124. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)