Mdo-HB-09-17

Haplotype Block Overview
Name Mdo-HB-09-17
Species Malus x domestica
Stock Haplotype [view all 424]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Cox's Orange Pippin 4 8
Rome Beauty Law 3 5
Jonafree 5 8
Redfree 3 4
Spartan 7 8
Wagener 3 5
Worcester Pearmain 3
Tsugaru 3 7
Golden Delicious 3
Fuji 3
Empire 7 8
Gala 3 8
Honeycrisp 5
Elstar 3 8
Marshall McIntosh 5 7
Cripps Pink 3 7
Granny Smith 5
Jonathan 7 8
Ralls Janet 3
Delicious 3 8
Prima 3
821 8
Fiesta 4 7
Ingrid Marie 4 8
Idared 5 7
Esopus Spitzenburg 3 7
Braeburn 3 4
Sansa 3
Lodi 3 4
James Grieve 4 7
Cripps Red 3 5
Burgundy 3 5
Akane 3 8
Ambrosia 3 8
Aurora Golden Gala 3 8
Beacon 16 8
Ben Davis 3 4 8
Cameo 3 8
Chinook 8
Clivia 4
Co-op 17 3 7
Co-op 18 5 8
Dayton 3 4 7
Delblush 3 8
Delorgue 3 8
Dolgo 10
Geheimrat Dr. Oldenburg 4 5
Duchess of Oldenburg 4 5
Early Cortland 3 4 7
Empress 4 7
F2 26829-2-2 3 8
Fantazja 4 5
Fireside 7 8
Fortune 5 8
Frostbite 5 7
Ginger Gold 3
GMAL 4327 3
GMAL 4328 3 4
GMAL 4329 3 7
GMAL 4332 3 4
Goodland 5 7
Haralson 4 7
Honeygold 3 7
Hudson 3 8
Jersey Black 12 7
Jonamac 7
Keepsake 5 7
Lady Williams 5 7
Liberty 3 7
Linda 4 7
Longfield 18 4
Macoun 7
Malinda 3 7
Melba 7
Melrose 3 8
MN 1627 3 5
MN 1628 5
MN 1691 7 8
MN 1706 5 7
MN 1708 5 7
MN 1760 3 7
MN 1764 3 7
MN 1789 5 8
MN 1802 5
MN 1836 4 7
MN 1837 5 7
MN 1839 3 4
MN 1888 3 8
MN 1899 4 5
MN 1940 7
MN 2016 3 4
AA-44 7
Monroe 3 7
Montgomery 3 4
Nicola 8
NJ 31 5
NJ 53 3 5
Oriole 4 7
PRI 14-126 3
PRI 14-510 3
PRI 1661-2 5 8
PRI 54-12 3 7
PRI 855-102 8
Primula 3 7
Raritan 7
Regent 4 5
Russian Seedling 3
Sawa 5 7
Sciros 3 8
Sharon 4 5
Silken 3
Wildung 4 7
Splendour 3 8
State Fair 4
NJ 55 3 8
Co-op 29 3 5
Sunrise 3 7
Sweet Sixteen 5
Topaz 3 4
Vista Bella 3 4
Wealthy 4 7
Winesap 8
Winter Banana 3 5
Yellow Newtown 3 8
Yellow Transparent 4 8
0407-0001 3 8
0407-0005 5 8
0407-0006 5 8
0407-0007 3 8
0407-0008 3
0408-0003 3 7
0408-0004 3 7
0408-0005 3 5
0408-0007 3 5
0408-0008 7 8
0408-0010 3 5
0408-0011 7 8
0408-0014 5 8
0408-0015 3 7
0409-0022 3 5
0409-0024 5 8
0409-0028 3 5
0409-0030 3 5
0409-0032 3 5
0409-0035 3 5
0409-0036 5 8
0409-0038 3 5
0409-0039 5 8
0409-0040 3 5
0409-0043 5 8
0409-0045 3 5
0410-0002 3 5
0410-0003 5 8
0410-0005 3 5
0410-0006 5 8
0410-0010 3 5
0410-0011 5 8
0410-0012 5 8
0410-0013 5 8
0410-0015 3 5
0410-0017 5 8
0410-0018 3 5
0414-0010 3 5
0414-0015 3 5
0414-0017 5
0414-0018 5 7
0414-0019 5
0414-0020 5 7
0414-0021 3 5
0415-0001 5 7
0415-0004 5
0415-0005 5 7
0415-0011 5
0415-0012 5 7
0415-0013 5 7
0415-0014 5 7
0415-0016 5
0415-0017 5 7
0415-0019 5
0415-0020 5
0415-0025 5 7
AE_HCXJonf-148 5 8
AE_HCXJonf-162 5
AE_HCXJonf-168 3 5
AE_HCxJonf-175 5
AE_HCxJonf-183 5 8
AE_HCxJonf-185 5 8
AE0118-237 4 5
AE0118-238 4 5
AE0118-239 4 5
AE0118-240 5
AE0118-243 4 5
AE0118-244 4 5
AE0118-245 4 5
AE0118-246 4 5
AE0118-249 5
AE0206-159 4 8
AE0206-160 4 8
AE0206-161 4 8
AE0206-162 4 8
AE0206-163 7 8
AE0206-164 7 8
AE0206-165 7 8
AE0206-167 7 8
AE0206-168 7 8
AE0206-169 4 8
AE0206-170 7 8
AE0210-146 7
AE0210-147 3 7
AE0210-149 3 7
AE0210-150 3
AE0210-151 3
AE0210-152 4 7
AE0210-153 7
AE0210-154 3
AE0210-157 7
AE0210-158 3 7
AE0210-159 3 7
AE0210-162 3 7
AE0210-163 3 7
AE0210-164 3 7
AE0210-165 3
AE0210-166 3 7
AE0210-168 3 7
AE0210-169 3 7
AE0210-170 3
AE0210-171 7
AE0210-172 3
AE0210-173 3 7
AE0210-174 7
AE0213-175 3 4
AE0213-176 3 4
AE0213-177 3 4
AE0213-178 3
AE0213-179 3 4
AE0213-180 3
AE0213-181 3 4
AE0213-182 3 4
AE0213-183 3
AE0213-186 3 4
AE0213-187 3
AE0213-190 3
AE0213-193 3
AE0213-194 3
AE0213-195 3
AE0213-196 3 4
AE0213-197 3
AE0213-198 3
AE0213-199 3
AE0213-200 3 4
AE0213-201 3 4
AE0213-202 3 4
AE0213-205 3
AE0213-206 3 4
AE0251-323 5 8
AE0251-325 5 8
AE0251-327 5 8
AE0251-329 5 8
AE0251-330 5 8
AE0251-331 5 8
AE0251-342 5 8
AE0251-343 5 8
AE0406-239 3 5
AE0406-254 3 5
AE0406-258 3 5
AE0406-259 3 5
AE0406-263 3 5
AE0406-264 3 5
AE0406-266 3 5
AE0406-271 5 7
AE0406-274 3 5
AE0406-278 3 5
AE0406-281 3 5
AE0406-286 3 5
AE0406-288 3 5
AE0406-289 3 5
AE0406-294 3 5
AE0406-298 3 5
Minneiska 5 7
NJ 303955 8
PRI 612-1 3 8
Arlet 3 5
Co-op 39 7
Pinova 3 4
Scired 3 8
Scifresh 3
0409-0025 3 5
0409-0026 5 8
0409-0027 3 5
0409-0031 3 5
0409-0033 3 5
0409-0047 3 5
G-14-050 3 4
G-14-052 3 4
G-14-054 3
G-14-055 3
G-14-056 3
G-14-057 3 4
G-14-059 3 4
G-14-060 3
G-14-061 3 4
G-14-062 3
G-14-064 3 4
G-14-065 3
G-14-069 3 4
G-14-067 3
G-14-068 3
G-14-071 3
G-14-073 3 4
G-14-074 3 4
G-14-075 3
G-14-076 3 4
G-14-077 3
G-14-078 3
G-14-080 3 4
G-09-232 3 4
G-09-233 3
G-09-234 3
G-09-235 3 4
G-09-236 3
G-09-237 3 4
G-09-238 3 4
G-09-239 3 4
G-09-240 3
G-09-241 3 4
G-09-242 3 4
G-09-243 3
G-09-245 3
G-09-246 3 4
G-09-258 3 4
G-09-259 3 4
G-09-260 3
G-09-261 3 4
G-09-262 3
G-09-263 3 4
G-09-264 3
G-09-265 3
G-09-266 3
G-09-267 3
G-09-268 3 4
0408-0021 3 7
Wijcik McIntosh 16 8
Priam 3 8
Northern Spy 3 5
Co-op 15 3 7
MN 1702 5 7
WA 2 3 8
WA 5 3 7
Pitmaston Pineapple 3 8
0411-0011 5 7
0411-0017 3 5
0411-0023 3 5
AE0250-086 5 8
AE0250-087 5 8
AE0250-089 5 8
AE0250-090 5 8
AE0250-092 5 8
AE0250-093 5 8
AE0250-094 5 8
AE0250-095 5 8
Sonya 4 8
Co-op 38 3
AE0250-096 7 8
AE0250-327 7 8
Co-op 30 5 7
Jonagrimes 3 4
AE0211-036 3 4
G-07-039 3 5
PRI 14-152 3 8
PRI 47-176 3 8
G-07-041 3
BC-8S-27-43 8
AE0250-091 3 5
AE0250-097 3 5
AE0250-325 3 5
AE0250-326 3 5
AE0250-329 3 5
AE0250-333 3 5
AE0250-334 3 5
AE0250-335 3 5
AE0250-336 3 5
AE0250-338 3 5
AE0250-341 3 5
AE0211-038 3
AE0211-043 3 4
AE0211-045 3 4
AE0211-051 3
G-07-010 3 5
G-07-014 3 5
G-07-015 3 5
G-07-019 3 5
G-07-020 3 5
G-07-024 3 5
G-07-032 3 5
G-07-033 3 5
G-07-034 3 5
G-07-035 3 5
G-07-044 3 5
AE0211-053 3 4
AE0211-054 3 4
AE0250-088 4 5
AE0250-324 4 5
AE0250-328 5 7
AE0250-331 4 5
AE0250-332 5 7
AE0250-337 5 7
AE0250-339 4 5
Minnewashta 4 7
Autumn Crisp 3
G-14-066 3 4
Lu1-11-010 3 8
Lu1-11-013 3 7
Lu1-11-016 3 7
Lu1-11-017 3 8
Lu1-11-018 3 7
NJ 90 5 8
Lord Lambourne 3 4
Antonovka GH 18 4
Grimes Golden 3
Kidds Orange Red 3 8
Malus baccata Hansen #2 5 8
Malus baccata Jackii 8
Summerred 4 7
William's Pride 4 7
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Mdo-HB-09-17Apple-RosBREED-3.9K-2019912.4112.41
Projects
Project Name
RosBREED_Apple_CRS_Haplotype_2020
Alignments
Feature NameTypeLocationAnalysis
Chr09 chromosome Chr09:6847859..7096964. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation