Mdo-HB-09-16

Haplotype Block Overview
Name Mdo-HB-09-16
Species Malus x domestica
Stock Haplotype [view all 425]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Cox's Orange Pippin 3
Rome Beauty Law 2 3
Jonafree 3 4
Redfree 2 3
Spartan 2 3
Wagener 2 4
Worcester Pearmain 2
Tsugaru 2
Golden Delicious 2
Fuji 2
Empire 2 3
Gala 2 3
Honeycrisp 3 4
Elstar 2 3
Marshall McIntosh 2 3
Cripps Pink 2
Granny Smith 3 4
Jonathan 2 3
Ralls Janet 2
Delicious 2 3
Discovery 2 4
Prima 2
821 3
Fiesta 2 3
Ingrid Marie 3
Idared 2 4
Esopus Spitzenburg 2
Braeburn 2 3
Sansa 2
Lodi 2 3
James Grieve 2 3
Cripps Red 2 4
Burgundy 2 3
Akane 2 3
Ambrosia 2 3
Aurora Golden Gala 2 3
Beacon 2 3
Ben Davis 2 3
Cameo 2 3
Chinook 3
Clivia 3
Co-op 17 2
Co-op 18 3 4
Dayton 2 3
Delblush 2 3
Delorgue 2 3
Dolgo 2
Geheimrat Dr. Oldenburg 3 4
Duchess of Oldenburg 3
Early Cortland 2 3
Empress 2 3
F2 26829-2-2 2 3
Fantazja 3
Fireside 2 3
Fortune 3 4
Frostbite 2 3
Ginger Gold 2
GMAL 4327 2
GMAL 4328 2 3
GMAL 4329 2
GMAL 4332 2 3
Goodland 2 3
Haralson 2 3
Honeygold 2
Hudson 2 3
Jersey Black 2 3
Jonamac 2
Keepsake 2 4
Kerr 2
Lady Williams 2 4
Liberty 2
Linda 2 3
Longfield 2 3
Macoun 2
Malinda 2
Melba 2
Melrose 2 3
MN 1627 2 3
MN 1628 3 4
MN 1691 2 3
MN 1706 2 3
MN 1708 2 3
MN 1760 2
MN 1764 2
MN 1789 3
MN 1802 3 4
MN 1836 2 3
MN 1837 2 3
MN 1839 2 3
MN 1888 2 3
MN 1899 3
MN 1940 2
MN 2016 2 3
AA-44 2
Monroe 2
Montgomery 2 3
Nicola 3
NJ 31 4
NJ 53 2 3
Oriole 2 3
PRI 14-126 2
PRI 14-510 2
PRI 1661-2 3
PRI 54-12 2
PRI 855-102 3
Primula 2
Raritan 2
Regent 3
Russian Seedling 2
Sawa 2 3
Sciros 2 3
Sharon 3
Silken 2
Wildung 2 3
Splendour 2 3
State Fair 3
NJ 55 2 3
Co-op 29 2 3
Sunrise 2
Sweet Sixteen 3 4
Topaz 2 3
Vista Bella 2 3
Wealthy 2 3
Winesap 3
Winter Banana 2 3
Yellow Newtown 2 3
Yellow Transparent 3
0407-0001 2 3
0407-0005 2 4
0407-0006 3 4
0407-0007 2 3
0407-0008 2
0408-0003 2
0408-0004 2
0408-0005 2 3
0408-0007 2 3
0408-0008 2 3
0408-0010 2 3
0408-0011 2 3
0408-0014 3
0408-0015 2
0409-0022 2 4
0409-0024 3
0409-0028 2 4
0409-0030 2 4
0409-0032 2 4
0409-0035 2 4
0409-0036 3
0409-0038 2 3
0409-0039 3 4
0409-0040 2 4
0409-0043 3 4
0409-0045 2 3
0410-0002 2 4
0410-0003 3 4
0410-0005 2 4
0410-0006 3
0410-0010 2 4
0410-0011 3
0410-0012 3 4
0410-0013 3 4
0410-0015 2 3
0410-0017 3 4
0410-0018 2 4
0414-0010 2 4
0414-0015 2 4
0414-0017 3 4
0414-0018 2 3
0414-0019 4
0414-0020 2 4
0414-0021 2 3
0415-0001 2 4
0415-0004 3
0415-0005 2 3
0415-0011 3
0415-0012 2 4
0415-0013 2 4
0415-0014 2 3
0415-0016 3 4
0415-0017 2 4
0415-0019 3
0415-0020 3
0415-0025 2 4
AE_HCxJonf-145 3
AE_HCXJonf-148 3 4
AE_HCXJonf-162 3 4
AE_HCXJonf-168 2 3
AE_HCxJonf-175 3 4
AE_HCxJonf-183 3 4
AE_HCxJonf-185 3
AE0118-237 3
AE0118-238 3
AE0118-239 3 4
AE0118-240 3 4
AE0118-244 3 4
AE0118-245 3
AE0118-246 3 4
AE0118-249 3 4
AE0206-159 3
AE0206-160 3
AE0206-161 3
AE0206-162 3
AE0206-163 2 3
AE0206-164 2 3
AE0206-165 2 3
AE0206-167 2 3
AE0206-168 2 3
AE0206-169 3
AE0206-170 2 3
AE0210-146 2
AE0210-147 2
AE0210-149 2
AE0210-150 2
AE0210-151 2
AE0210-152 2 3
AE0210-153 2
AE0210-154 2
AE0210-157 2
AE0210-158 2
AE0210-159 2
AE0210-162 2
AE0210-163 2
AE0210-164 2
AE0210-165 2
AE0210-166 2
AE0210-168 2
AE0210-169 2
AE0210-170 2
AE0210-171 2
AE0210-172 2
AE0210-173 2
AE0210-174 2
AE0213-175 2 3
AE0213-176 2 3
AE0213-177 2 3
AE0213-178 2
AE0213-179 2 3
AE0213-180 2
AE0213-181 2 3
AE0213-183 2
AE0213-186 2 3
AE0213-187 2
AE0213-190 2
AE0213-193 2
AE0213-194 2
AE0213-195 2
AE0213-196 2 3
AE0213-197 2
AE0213-198 2
AE0213-199 2
AE0213-200 2 3
AE0213-201 2 3
AE0213-202 2 3
AE0213-205 2
AE0213-206 2 3
AE0251-323 3 4
AE0251-327 3 4
AE0251-329 3 4
AE0251-330 3
AE0251-331 3 4
AE0251-342 3 4
AE0251-343 3
AE0406-239 2 4
AE0406-254 2 4
AE0406-258 2 3
AE0406-259 2 3
AE0406-263 2 3
AE0406-264 2 4
AE0406-266 2 3
AE0406-271 2 4
AE0406-274 2 3
AE0406-278 2 4
AE0406-281 2 3
AE0406-286 2 4
AE0406-288 2 3
AE0406-289 2 4
AE0406-294 2 4
AE0406-298 2 4
Minneiska 2 3
NJ 303955 3
PRI 612-1 2 3
Arlet 2 4
Co-op 39 2
Pinova 2 3
Scired 2 3
Scifresh 2
0409-0025 2 3
0409-0026 3 4
0409-0027 2 4
0409-0031 2 4
0409-0033 2 3
0409-0047 2 4
G-14-050 2 3
G-14-052 2 3
G-14-054 2
G-14-055 2
G-14-056 2
G-14-057 2 3
G-14-059 2 3
G-14-060 2
G-14-061 2 3
G-14-062 2
G-14-064 2 3
G-14-065 2
G-14-069 2 3
G-14-067 2
G-14-068 2
G-14-071 2
G-14-073 2 3
G-14-074 2 3
G-14-075 2
G-14-076 2 3
G-14-077 2
G-14-078 2
G-14-080 2 3
G-09-232 2 3
G-09-233 2
G-09-234 2
G-09-235 2 3
G-09-236 2
G-09-237 2 3
G-09-238 2 3
G-09-239 2 3
G-09-240 2
G-09-241 2 3
G-09-242 2 3
G-09-243 2
G-09-245 2
G-09-246 2 3
G-09-258 2 3
G-09-259 2 3
G-09-260 2
G-09-261 2 3
G-09-262 2
G-09-263 2 3
G-09-264 2
G-09-265 2
G-09-266 2
G-09-267 2
G-09-268 2 3
0408-0021 2
Wijcik McIntosh 2 3
Beauty of Bath 3 4
Priam 2 3
Northern Spy 2 4
Co-op 15 2
MN 1702 2 3
WA 2 2 3
WA 5 2
Pitmaston Pineapple 2 3
0411-0011 2 4
0411-0017 2 3
0411-0023 2 3
AE0250-086 3 4
AE0250-087 3 4
AE0250-089 3
AE0250-090 3
AE0250-092 3
AE0250-093 3 4
AE0250-094 3
AE0250-095 3
Sonya 3
Co-op 38 2
AE0250-096 2 3
AE0250-327 2 3
Co-op 30 2 3
Jonagrimes 2 3
AE0211-036 2 3
G-07-039 2 3
PRI 14-152 2
PRI 47-176 2 3
G-07-041 2
BC-8S-27-43 3
AE0250-091 2 3
AE0250-097 2 4
AE0250-325 2 4
AE0250-326 2 3
AE0250-329 2 3
AE0250-333 2 4
AE0250-334 2 4
AE0250-335 2 4
AE0250-336 2 4
AE0250-338 2 4
AE0250-341 2 3
AE0211-038 2
AE0211-043 2 3
AE0211-045 2 3
AE0211-051 2
G-07-010 2 4
G-07-014 2 4
G-07-015 2 3
G-07-019 2 3
G-07-020 2 3
G-07-024 2 3
G-07-032 2 4
G-07-033 2 4
G-07-034 2 4
G-07-035 2 4
G-07-044 2 4
AE0211-053 2 3
AE0211-054 2 3
AE0250-088 3
AE0250-324 3
AE0250-328 2 3
AE0250-331 3 4
AE0250-332 2 3
AE0250-337 2 4
AE0250-339 3
Minnewashta 2 3
Autumn Crisp 2
G-14-066 2 3
Lu1-11-010 2 3
Lu1-11-013 2
Lu1-11-016 2
Lu1-11-017 2 3
Lu1-11-018 2
NJ 90 3
Lord Lambourne 2 3
Antonovka GH 2 3
Grimes Golden 2
Kidds Orange Red 2 3
Malus baccata Hansen #2 2 3
Malus baccata Jackii 2
Summerred 2 3
William's Pride 2 3
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Mdo-HB-09-16Apple-RosBREED-3.9K-2019912.4112.41
Projects
Project Name
RosBREED_Apple_CRS_Haplotype_2020
Alignments
Feature NameTypeLocationAnalysis
Chr09 chromosome Chr09:6793504..6795880. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation