Ppe-HB-08-8 | GDR

Haplotype Block Overview

Stock Haplotype

Haplotype Block Overview

Name	Ppe-HB-08-8
Species	Prunus persica
Stock Haplotype	[view all 71]
Haplotype	[view all]

Publications


Year	Publication
2019	Vanderzande S, Howard NP, Cai L, Da Silva Linge C, Antanaviciute L, Bink MCAM, Kruisselbrink JW, Bassil N, Gasic K, Iezzoni A, Van de Weg E, Peace C. High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow. PloS one. 2019; 14(6):e0210928.

Stock Haplotype

Name	Haplotype
Redhaven	2
Loring	2
Lovell	2
Contender	2
BY01p6245	2 8
Clayton	2
Candor	2
Blazeprince	2 3
Bradley	2
Chinese Cling	2 3
Elberta	2
Redskin	2 3
Westbrook	2
Winblo	2
Bolinha	3 6
Early Crawford	2
Late Crawford	2
Springtime	15 16
BY92P2710	2 3
Caroking	2
Encore	2
Intrepid	2 3
Reliance	2
Autumnglo	2
BY00P6346u	2 3
Challenger	2 3
EarlyRedFree	2
Flordaprince	2 8
Goldprince	2
Jefferson	2
Springprince	19 20
Tropic Beauty	21 8
TX2B136	21 8
Wiser	2
Galaxy	10 9
Harvester	2 3
Orange Cling	2
Raritan Rose	2 3
CAF 4	10 9
Arrington	2
A-699	2 3
A-708	2
CAF 2	2
CAF 3	2 3
Baifeng	10 9
St. John	2
White Country	2
A-657	2
A-663	2
A-665	2
A-672	2 3
A-773	2 3
A-778	2
Amoore Sweet	2 3
A-776	2
A-772	2
A-789	2
A-783	3 6
Jean Han Hale	2
O'Henry	2
A-716	2
Belle of Georgia	2 3
Souvenirs	2
TXW1490-1	21 8
Zin Dai	12 9
TX2293-3	2 8
Carolina Gold	2
White River	2
Crimson Lady	17 18
TXW1293-1	21 8
A-760	2 3

Map Positions


Haplotype Block	Map Name	Linkage Group	Start	Stop
Ppe-HB-08-8	Peach-RosBREED-4K-2019	8	24.8	25.05

Projects


Project Name
RosBREED_Peach_CRS_Haplotype_2020

Haplotypes

Marker	HB-08-8_10	HB-08-8_11	HB-08-8_12	HB-08-8_14	HB-08-8_15	HB-08-8_16	HB-08-8_17	HB-08-8_18	HB-08-8_19	HB-08-8_2	HB-08-8_20	HB-08-8_21	HB-08-8_3	HB-08-8_6	HB-08-8_8	HB-08-8_9
SNP_IGA_829630	B	-	-	-	B	B	B	A	B	B	B	B	A	B	B	A
SNP_IGA_829787	B	B	B	A	B	A	A	B	A	B	B	B	B	B	A	B
SNP_IGA_829800	B	B	B	A	A	B	A	B	A	B	A	A	B	B	A	B
SNP_IGA_829808	B	B	B	A	A	B	A	B	A	B	B	B	B	B	A	B
SNP_IGA_829819	B	-	-	B	A	B	A	B	A	A	B	A	B	A	B	A
SNP_IGA_829830	B	A	B	B	B	B	B	A	B	B	B	B	A	A	B	A
SNP_IGA_829859	B	A	B	A	B	A	A	A	A	B	A	A	A	A	A	A
SNP_IGA_829884	B	B	B	A	B	A	B	A	A	B	B	B	B	B	A	B
SNP_IGA_830082	B	B	B	A	B	A	B	A	A	B	A	A	B	B	A	B

Alignments

Feature Name	Type	Location	Analysis
Pp08	chromosome	Pp08:6199977..6262185.	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)