Ppe-HB-08-7 | GDR

Haplotype Block Overview

Stock Haplotype

Haplotype Block Overview

Name	Ppe-HB-08-7
Species	Prunus persica
Stock Haplotype	[view all 70]
Haplotype	[view all]

Publications


Year	Publication
2019	Vanderzande S, Howard NP, Cai L, Da Silva Linge C, Antanaviciute L, Bink MCAM, Kruisselbrink JW, Bassil N, Gasic K, Iezzoni A, Van de Weg E, Peace C. High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow. PloS one. 2019; 14(6):e0210928.

Stock Haplotype

Name	Haplotype
Redhaven	7
Loring	7
Lovell	7
Contender	7
BY01p6245	14 7
Clayton	7
Candor	7
Blazeprince	5 7
Bradley	4 5
Chinese Cling	4 5
Elberta	5 7
Redskin	5 7
Westbrook	7
Winblo	7
Bolinha	4 5
Early Crawford	7
Late Crawford	7
Springtime	19 20
BY92P2710	5 7
Caroking	7
Encore	7
Intrepid	5 7
Reliance	7
Autumnglo	7
BY00P6346u	5 7
Challenger	5 7
EarlyRedFree	7
Flordaprince	14 7
Goldprince	5 7
Jefferson	5 7
Springprince	14
Tropic Beauty	14
TX2B136	14
Wiser	7
Galaxy	5 7
Harvester	5 7
Orange Cling	7
Raritan Rose	5 7
CAF 4	5 7
Arrington	8 9
A-699	4 6
A-708	7
CAF 2	7
CAF 3	5 7
St. John	7
White Country	5 7
A-657	4 5
A-663	4 6
A-665	7
A-672	5 7
A-773	5 7
A-778	4 5
Amoore Sweet	4
A-776	4 6
A-772	7
A-789	5 7
A-783	4 5
Jean Han Hale	7
O'Henry	5 7
A-716	7
Belle of Georgia	4 6
Souvenirs	7
TXW1490-1	14
Zin Dai	17
TX2293-3	14 5
Carolina Gold	7
White River	7
Crimson Lady	21 22
TXW1293-1	14
A-760	5 7

Map Positions


Haplotype Block	Map Name	Linkage Group	Start	Stop
Ppe-HB-08-7	Peach-RosBREED-4K-2019	8	22.91	24.59

Projects


Project Name
RosBREED_Peach_CRS_Haplotype_2020

Haplotypes

Marker	HB-08-7_10	HB-08-7_14	HB-08-7_17	HB-08-7_18	HB-08-7_19	HB-08-7_20	HB-08-7_21	HB-08-7_22	HB-08-7_4	HB-08-7_5	HB-08-7_6	HB-08-7_7	HB-08-7_8	HB-08-7_9
SNP_IGA_826441	B	A	B	B	B	A	B	A	B	B	B	B	B	B
SNP_IGA_827584	-	B	-	-	B	B	B	A	B	A	A	B	B	A
SNP_IGA_827612	A	A	B	B	B	A	A	A	A	A	B	B	A	B
SNP_IGA_827966	A	A	B	B	B	A	A	A	A	A	B	B	B	A
SNP_IGA_828011	B	B	A	A	B	A	B	B	B	B	A	A	B	A
SNP_IGA_828034	B	B	A	A	A	B	B	B	B	B	A	A	B	A
SNP_IGA_828051	B	B	A	A	B	A	B	B	B	B	A	A	B	A
SNP_IGA_828056	A	A	B	A	B	A	A	A	A	A	B	B	A	B
SNP_IGA_828072	B	B	A	A	B	A	B	B	B	B	A	A	B	A
SNP_IGA_828918	B	B	A	B	A	B	B	B	B	B	A	A	A	B
SNP_IGA_828932	A	B	A	B	A	B	B	A	A	A	A	A	A	A
SNP_IGA_828943	A	B	A	B	B	A	B	A	A	A	A	A	A	A
SNP_IGA_828948	B	B	A	B	A	B	B	B	B	B	A	A	A	B
SNP_IGA_828960	B	A	B	A	B	A	B	A	B	B	B	B	B	B
SNP_IGA_828970	B	A	A	A	A	A	B	A	B	B	A	A	B	A

Alignments

Feature Name	Type	Location	Analysis
Pp08	chromosome	Pp08:5727159..6147815.	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)