Ppe-HB-06-9 | GDR

Haplotype Block Overview

Stock Haplotype

Haplotype Block Overview

Name	Ppe-HB-06-9
Species	Prunus persica
Stock Haplotype	[view all 72]
Haplotype	[view all]

Publications


Year	Publication
2019	Vanderzande S, Howard NP, Cai L, Da Silva Linge C, Antanaviciute L, Bink MCAM, Kruisselbrink JW, Bassil N, Gasic K, Iezzoni A, Van de Weg E, Peace C. High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow. PloS one. 2019; 14(6):e0210928.

Stock Haplotype

Name	Haplotype
Redhaven	5 6
Loring	12 6
Lovell	5
Contender	5
BY01p6245	5 9
Clayton	12 8
Candor	12 6
Blazeprince	5
Bradley	4 5
Chinese Cling	8 9
Elberta	5 8
Redskin	4 5
Westbrook	4 5
Winblo	5
Bolinha	14 9
Early Crawford	4
Late Crawford	4 5
Springtime	12 5
Biscoe	5 8
BY92P2710	12 5
Caroking	12 5
Encore	5
Intrepid	5 6
Reliance	4
Autumnglo	5
BY00P6346u	5 9
Challenger	4 6
EarlyRedFree	12 5
Flordaprince	5
Goldprince	5 6
Jefferson	5 8
Springprince	12
Tropic Beauty	5
TX2B136	5
Wiser	5
Galaxy	12 7
Harvester	5
Orange Cling	4 5
Raritan Rose	8
CAF 4	15 5
Arrington	4
A-699	5 7
A-708	5
CAF 2	15 5
CAF 3	12 5
Baifeng	5 8
St. John	5
White Country	5
A-657	4
A-663	4 6
A-665	6 7
A-672	5
A-773	12 13
A-778	4
Amoore Sweet	6 7
A-776	4 7
A-772	5 6
A-789	5
A-783	12 5
Jean Han Hale	5 8
O'Henry	5
A-716	5 6
Belle of Georgia	4 8
Souvenirs	5
TXW1490-1	5
Zin Dai	13 8
TX2293-3	5
Carolina Gold	12 8
White River	6 8
Crimson Lady	5
TXW1293-1	5
A-760	12 5

Map Positions


Haplotype Block	Map Name	Linkage Group	Start	Stop
Ppe-HB-06-9	Peach-RosBREED-4K-2019	6	93.28	95.06

Projects


Project Name
RosBREED_Peach_CRS_Haplotype_2020

Haplotypes

Marker	HB-06-9_12	HB-06-9_13	HB-06-9_14	HB-06-9_15	HB-06-9_20	HB-06-9_4	HB-06-9_5	HB-06-9_6	HB-06-9_7	HB-06-9_8	HB-06-9_9
SNP_IGA_678681	A	A	A	A	B	B	A	A	B	B	B
SNP_IGA_678798	B	A	A	B	B	B	B	B	A	A	A
SNP_IGA_678844	A	B	B	A	A	A	A	A	B	A	B
SNP_IGA_679038	A	A	A	B	B	B	A	A	B	B	A
SNP_IGA_679199	A	B	B	A	A	A	B	B	A	A	A
SNP_IGA_679213	B	A	A	B	B	B	A	A	B	B	B
SNP_IGA_679852	A	B	A	A	B	A	B	A	B	B	A

Alignments

Feature Name	Type	Location	Analysis
Pp06	chromosome	Pp06:23319780..23764948.	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)