Ppe-HB-04-4 | GDR

Haplotype Block Overview

Stock Haplotype

Haplotype Block Overview

Name	Ppe-HB-04-4
Species	Prunus persica
Stock Haplotype	[view all 71]
Haplotype	[view all]

Publications


Year	Publication
2019	Vanderzande S, Howard NP, Cai L, Da Silva Linge C, Antanaviciute L, Bink MCAM, Kruisselbrink JW, Bassil N, Gasic K, Iezzoni A, Van de Weg E, Peace C. High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow. PloS one. 2019; 14(6):e0210928.

Stock Haplotype

Name	Haplotype
Redhaven	2 4
Loring	2 4
Lovell	26
Contender	2
BY01p6245	13 2
Clayton	2 4
Candor	12 4
Blazeprince	12 4
Bradley	2
Chinese Cling	4 7
Elberta	2 4
Redskin	2 4
Westbrook	2
Winblo	2 4
Bolinha	13
Early Crawford	2
Late Crawford	2
Springtime	22 5
Biscoe	2
BY92P2710	2 4
Caroking	2 4
Encore	2
Intrepid	2
Autumnglo	11 2
BY00P6346u	13 4
Challenger	2 4
EarlyRedFree	12 14
Flordaprince	12 4
Goldprince	25 4
Jefferson	2 9
Springprince	12 4
Tropic Beauty	2 4
TX2B136	16 2
Wiser	26
Galaxy	4 5
Harvester	2 4
Orange Cling	2
Raritan Rose	2
CAF 4	2 6
Arrington	2
A-699	5 6
A-708	2 4
CAF 2	16 6
CAF 3	16 4
Baifeng	2 7
St. John	26
White Country	10 2
A-657	2
A-663	2
A-665	2
A-672	3 4
A-773	2 6
A-778	2 4
Amoore Sweet	2 5
A-776	2 6
A-772	2 4
A-789	10 4
A-783	2 6
Jean Han Hale	2 4
O'Henry	2 4
A-716	2 9
Belle of Georgia	4 6
Souvenirs	2
TXW1490-1	2
Zin Dai	2 7
TX2293-3	2 4
Carolina Gold	2
White River	2
Crimson Lady	22 4
TXW1293-1	2 4
A-760	2

Map Positions


Haplotype Block	Map Name	Linkage Group	Start	Stop
Ppe-HB-04-4	Peach-RosBREED-4K-2019	4	10.54	12.17

Projects


Project Name
RosBREED_Peach_CRS_Haplotype_2020

Haplotypes

Marker	HB-04-4_10	HB-04-4_11	HB-04-4_12	HB-04-4_13	HB-04-4_14	HB-04-4_16	HB-04-4_17	HB-04-4_18	HB-04-4_2	HB-04-4_22	HB-04-4_25	HB-04-4_26	HB-04-4_3	HB-04-4_4	HB-04-4_5	HB-04-4_6	HB-04-4_7	HB-04-4_9
SNP_IGA_382215	B	A	B	B	A	B	-	-	B	B	B	B	B	A	A	B	B	A
SNP_IGA_382355	A	A	A	B	B	B	-	-	B	B	B	B	B	A	B	A	A	-
SNP_IGA_382368	A	A	A	B	B	B	-	-	B	B	B	B	B	A	B	A	A	-
SNP_IGA_382420	B	A	A	A	A	A	A	A	A	B	B	A	A	A	B	B	A	A
SNP_IGA_382456	A	B	B	B	B	B	B	B	B	B	B	B	B	B	B	A	B	B
SNP_IGA_382502	B	A	A	A	A	A	A	A	A	A	A	A	A	A	A	B	B	A
SNP_IGA_382599	B	A	A	A	A	A	A	A	A	B	B	A	A	A	B	B	A	A
SNP_IGA_382677	B	A	A	A	A	A	A	A	A	A	A	A	A	A	A	B	B	A
SNP_IGA_382868	A	B	B	B	B	B	A	B	B	B	B	A	B	B	B	A	B	B
SNP_IGA_383043	A	B	B	B	A	B	A	B	A	A	B	A	A	B	A	A	B	-
SNP_IGA_383080	A	B	B	B	A	B	A	B	A	A	B	A	A	B	A	A	B	-
SNP_IGA_383357	A	B	A	B	B	A	-	-	B	A	A	A	A	A	A	A	A	-
SNP_IGA_383427	A	B	A	B	B	A	-	-	B	A	A	B	B	A	A	B	A	-

Alignments

Feature Name	Type	Location	Analysis
Pp04	chromosome	Pp04:2635370..3042273.	Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)