Mdo-HB-02-12a

Haplotype Block Overview
Name Mdo-HB-02-12a
Species Malus x domestica
Stock Haplotype [view all 431]
Haplotype [view all]
Stock Haplotype
NameHaplotype
Cox's Orange Pippin 13 4
Rome Beauty Law 5 9
Jonafree 5 6
Redfree 4 5
Spartan 4 8
Wagener 4 5
Worcester Pearmain 13 4
Tsugaru 4 6
Golden Delicious 4
Fuji 4 5
Empire 4 5
Gala 4
Honeycrisp 4
Elstar 4
Marshall McIntosh 5 8
Cripps Pink 4
Granny Smith 4 5
Jonathan 4 6
Ralls Janet 2 5
Delicious 4 6
Discovery 11 4
Prima 4 5
821 4 8
Fiesta 13 4
Ingrid Marie 13 4
Idared 4 5
Esopus Spitzenburg 6
Braeburn 13 4
Sansa 4
Lodi 4
James Grieve 13 4
Cripps Red 4
Burgundy 4 5
Akane 4
Ambrosia 4 6
Aurora Golden Gala 4 6
Beacon 4
Ben Davis 4 6
Cameo 4
Chinook 4 6
Clivia 13 17
Co-op 17 5 6
Co-op 18 18 4
Dayton 4 5
Delblush 4
Delcorf 4
Delorgue 4
Dolgo 9
Geheimrat Dr. Oldenburg 17 4
Duchess of Oldenburg 4 5
Early Cortland 4 6 8
Empress 4
F2 26829-2-2 5 6
Fantazja 4 5
Fireside 4 6
Fortune 4
Frostbite 4 6
Ginger Gold 4
GMAL 4327 4 6
GMAL 4328 4 6
GMAL 4329 4 6
GMAL 4332 13 4
Goodland 5 8
Haralson 13 6
Honeygold 4 6
Hudson 4
Jersey Black 3 6
Jonamac 4 8
Keepsake 4 6
Kerr 13 9
Lady Williams 4 5
Liberty 5 6
Linda 4 6
Liveland Raspberry 11 4
Longfield 4 6
Macoun 5 6
Malinda 13 4
Melba 11 5
MN 1627 4
MN 1628 4
MN 1691 6 8
MN 1706 4 6
MN 1708 4 6
MN 1760 6
MN 1764 4 6
MN 1789 4 8
MN 1802 6
MN 1836 4
MN 1837 4 6
MN 1839 4
MN 1888 4 6
MN 1899 4 8
MN 1940 4 6
MN 2016 4 6
AA-44 4
Monroe 5 6
Montgomery 4
Nicola 4 6
NJ 31 5
NJ 53 4
Oriole 4 5
PRI 14-126 4 6
PRI 14-510 4 6
PRI 16-144 6
PRI 1661-2 5 6
PRI 54-12 5 6
PRI 855-102 6
Primula 5 6
Raritan 4 5
Regent 6 8
Rubin 4
Russian Seedling 4
Sawa 4 6
Sciros 4 6
Sharon 5 8
Silken 4 6
Wildung 4 5
Splendour 4 6
State Fair 4 6
NJ 55 13 4
Co-op 29 4 8
Sunrise 4 5
Sweet Sixteen 4
Topaz 4
Vanda 4
Vista Bella 4 5
Wealthy 5 6
Winesap 6
Winter Banana 18 4
Yellow Newtown 4 6
Yellow Transparent 4
0407-0001 4
0407-0005 4 6
0407-0006 4 6
0407-0007 4 6
0407-0008 4
0408-0003 6
0408-0004 4 6
0408-0005 6
0408-0007 6
0408-0008 4 6
0408-0010 4 6
0408-0011 4 6
0408-0014 6
0408-0015 4 6
0409-0022 4
0409-0024 4 6
0409-0028 4 6
0409-0030 4
0409-0032 4 6
0409-0035 4
0409-0036 4 6
0409-0038 4 6
0409-0039 4
0409-0040 4
0409-0043 4 6
0409-0045 4
0410-0002 4 6
0410-0003 4 5
0410-0005 5 6
0410-0006 4 6
0410-0010 4 6
0410-0011 5 6
0410-0012 4 6
0410-0013 4 5
0410-0015 4 6
0410-0017 4 5
0410-0018 5 6
0414-0010 4
0414-0015 4
0414-0017 4
0414-0018 4 6
0414-0019 4
0414-0020 4 6
0414-0021 4
0415-0001 4 6
0415-0004 4 6
0415-0005 4 6
0415-0011 4 6
0415-0012 4 6
0415-0013 4 6
0415-0014 13 4
0415-0016 4 6
0415-0017 4 6
0415-0019 4 6
0415-0020 4 6
0415-0025 4 6
AE_HCxJonf-145 4 6
AE_HCXJonf-148 4 6
AE_HCxJonf-157 4 5
AE_HCXJonf-162 4 6
AE_HCXJonf-168 4 8
AE_HCxJonf-175 4 5
AE_HCxJonf-183 4 6
AE_HCxJonf-185 4 6
AE0118-237 4 8
AE0118-238 4 6
AE0118-239 4
AE0118-240 4 8
AE0118-243 4 8
AE0118-244 4 6
AE0118-245 4 6
AE0118-246 4 6
AE0118-249 4 6
AE0206-159 4 8
AE0206-160 4 8
AE0206-161 4 6
AE0206-162 4 6
AE0206-163 4 8
AE0206-164 4 8
AE0206-165 4 6
AE0206-167 4 6
AE0206-168 4 8
AE0206-169 4 8
AE0206-170 4 6
AE0210-146 4 5
AE0210-147 4
AE0210-149 4
AE0210-150 4 6
AE0210-151 4
AE0210-152 5 6
AE0210-153 5 6
AE0210-154 4 5
AE0210-157 4 6
AE0210-158 4
AE0210-159 5 6
AE0210-162 4
AE0210-163 5 6
AE0210-164 5 6
AE0210-165 5 6
AE0210-166 4
AE0210-168 4
AE0210-169 4
AE0210-170 4 6
AE0210-171 4 5
AE0210-172 4 6
AE0210-173 5 6
AE0210-174 4 6
AE0213-175 4
AE0213-176 4
AE0213-177 4
AE0213-178 4
AE0213-179 4
AE0213-180 13 4
AE0213-181 4
AE0213-182 4
AE0213-183 4
AE0213-186 13 4
AE0213-187 13 4
AE0213-190 13 4
AE0213-193 4
AE0213-194 4
AE0213-195 13 4
AE0213-196 4
AE0213-197 13 4
AE0213-198 4
AE0213-199 4
AE0213-200 4
AE0213-201 4
AE0213-202 4
AE0213-205 4
AE0213-206 4
AE0251-323 4
AE0251-325 4
AE0251-327 4
AE0251-329 4
AE0251-330 4
AE0251-331 4
AE0251-342 4
AE0251-343 4
AE0406-239 4
AE0406-254 4
AE0406-258 4
AE0406-259 4
AE0406-263 4 6
AE0406-264 4 6
AE0406-266 4 6
AE0406-271 4
AE0406-274 4
AE0406-278 4 6
AE0406-281 4 6
AE0406-286 4
AE0406-288 4 6
AE0406-289 4
AE0406-294 4 6
AE0406-298 4 6
Minneiska 4 6
NJ 303955 13
PRI 612-1 4 6
Arlet 4
Co-op 39 4
Pinova 13 4
Scired 4
Scifresh 13 4
0409-0025 4
0409-0026 4 6
0409-0027 4
0409-0031 4
0409-0033 4
0409-0047 4
G-14-050 4
G-14-052 4
G-14-054 13 4
G-14-055 13 4
G-14-056 4
G-14-057 13 4
G-14-059 13 4
G-14-060 4
G-14-061 13 4
G-14-062 4
G-14-064 13 4
G-14-065 4
G-14-069 4
G-14-067 4
G-14-068 4
G-14-071 4
G-14-073 13 4
G-14-074 4
G-14-075 13 4
G-14-076 13 4
G-14-077 4
G-14-078 4
G-14-080 4
G-09-232 13 4
G-09-233 13 4
G-09-234 13 4
G-09-235 4
G-09-236 13 4
G-09-237 13 4
G-09-238 4
G-09-239 13 4
G-09-240 13 4
G-09-241 4
G-09-242 13 4
G-09-243 4
G-09-245 13 4
G-09-246 13 4
G-09-258 13 4
G-09-259 13 4
G-09-260 4
G-09-261 13 4
G-09-262 4
G-09-263 13 4
G-09-264 13 4
G-09-265 4
G-09-266 13 4
G-09-267 4
G-09-268 4
0408-0021 6
Wijcik McIntosh 17 18
Beauty of Bath 11
Priam 6
Northern Spy 4 6
Co-op 15 5 6
MN 1702 4
WA 2 4 6
WA 5 4 6
Pitmaston Pineapple 17 4
0411-0011 4 6
0411-0017 4 6
0411-0023 4 6
AE0250-086 4
AE0250-087 4
AE0250-089 4
AE0250-090 4
AE0250-092 4
AE0250-093 4
AE0250-094 4
AE0250-095 4
Sonya 4
Co-op 38 4 6
AE0250-096 4 8
AE0250-327 4 6
Co-op 30 6
AE0211-036 4
G-07-039 4
PRI 14-152 4 5
PRI 47-176 4 5
G-07-041 4 5
BC-8S-27-43 4
AE0250-091 4 6
AE0250-097 4 6
AE0250-325 4
AE0250-326 4 6
AE0250-329 4 6
AE0250-333 4
AE0250-334 4
AE0250-335 4 6
AE0250-336 4 6
AE0250-338 4
AE0250-341 4 6
AE0211-038 4
AE0211-043 4 6
AE0211-051 4 6
G-07-010 4
G-07-014 4
G-07-015 4 5
G-07-019 4 5
G-07-020 4 5
G-07-024 4 5
G-07-032 4
G-07-033 4 5
G-07-034 4 5
G-07-035 4
G-07-044 4
AE0211-053 4 8
AE0211-054 4 6
AE0250-088 4 6
AE0250-324 4 6
AE0250-328 4 8
AE0250-331 4 6
AE0250-332 4 6
AE0250-337 4 8
AE0250-339 4 8
Minnewashta 6 8
Autumn Crisp 4 6
G-14-066 4
Lu1-11-010 4 5
Lu1-11-013 5
Lu1-11-016 5
Lu1-11-017 5
Lu1-11-018 4 5
NJ 90 5 8
Lord Lambourne 13 4
Antonovka GH 4
Grimes Golden 2 4
Kidds Orange Red 13 4
Malus baccata Hansen #2 4 8
Malus baccata Jackii 4
Summerred 4 8
William's Pride 4
Map Positions
Haplotype BlockMap NameLinkage GroupStartStop
Mdo-HB-02-12aApple-RosBREED-3.9K-201928.868.86
Projects
Project Name
RosBREED_Apple_CRS_Haplotype_2020
Alignments
Feature NameTypeLocationAnalysis
Chr02 chromosome Chr02:4682691..4790747. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation