CBPc_2

Marker Overview
NameCBPc_2
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:CBPc_2
TypeSNP
SNP AllelesT/C
5' Flanking SequenceCTGAAGAGAAAATTTTCCCATGGAGAAAGCAATTCCAACCAAGAACTTCC
3' Flanking SequenceGACACCTGCAACTACCGAAGAGGAAGCAAATTCAAGAGACTTAGCGTGGA
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Commentsweet cherry SNPs from ESTs discovered by Castede et al (2015)
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RosBREED-3.8K-20202N/A7.07CBPc_2View
Sequence
>CBPc_2 ID=CBPc_2; Name=CBPc_2; organism=Prunus avium; type=genetic_marker; length=101bp
CTGAAGAGAAAATTTTCCCATGGAGAAAGCAATTCCAACCAAGAACTTCC
YGACACCTGCAACTACCGAAGAGGAAGCAAATTCAAGAGACTTAGCGTGG
A
Alignments
Feature NameTypeLocationAnalysis
Pp02 chromosome Pp02:3108977..3108977. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr2 chromosome PAV_r1.0chr2:1032205..1032205. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)