EMF2_2

Marker Overview
NameEMF2_2
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:EMF2_2
TypeSNP
SNP AllelesT/G
5' Flanking SequenceTTGTATGTTATCTTCTCAGTGTTTTCTCCTTTAATTCAATAATTCTGATC
3' Flanking SequenceCTCTCTCTCTCTACACACACACACTCTATCCAACATTTCTCTTCTAGGCA
SpeciesPrunus avium
Publication[view all]
ContactStijn Vanderzande
Commentsweet cherry SNPs from ESTs discovered by Castede et al (2015)
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RosBREED-3.8K-20204N/A30.81EMF2_2View
Sequence
>EMF2_2 ID=EMF2_2; Name=EMF2_2; organism=Prunus avium; type=genetic_marker; length=101bp
TTGTATGTTATCTTCTCAGTGTTTTCTCCTTTAATTCAATAATTCTGATC
KCTCTCTCTCTCTACACACACACACTCTATCCAACATTTCTCTTCTAGGC
A
Alignments
Feature NameTypeLocationAnalysis
Pp04 chromosome Pp04:8739405..8739405. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr4 chromosome PAV_r1.0chr4:11192215..11192215. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)