scaffold_6:28857698

Marker Overview
Namescaffold_6:28857698
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:scaffold_6:28857698
TypeSNP
SNP AllelesT/C
5' Flanking SequenceTGCACCTGAAAAATTGCTCTCTGTACCAGAAGGGTTCACTTCGAAACCAAGTGATTTTCT AATGGAATCTACGCCTGACAAAGAAATCATAGGTGGGGATG
3' Flanking SequenceTGGTGATGATACTGGGATCAAACTCATCTCAGGGAAAAAACGTAGTTCCACAGAAAGTAC TATGACAGTGCAGAGTTTAAATTCAGTTGAATCATTTGGAG
SpeciesPrunus cerasus
Publication[view all]
ContactStijn Vanderzande
Commentntragenic SNPs representing the fruticosa subgenome of tart cherry identified by Peace et al (2012) but not used for the original 6K SNP array
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Sequence
>scaffold_6:28857698 ID=scaffold_6:28857698; Name=scaffold_6:28857698; organism=Prunus cerasus; type=genetic_marker; length=203bp
TGCACCTGAAAAATTGCTCTCTGTACCAGAAGGGTTCACTTCGAAACCAA
GTGATTTTCTAATGGAATCTACGCCTGACAAAGAAATCATAGGTGGGGAT
GYTGGTGATGATACTGGGATCAAACTCATCTCAGGGAAAAAACGTAGTTC
CACAGAAAGTACTATGACAGTGCAGAGTTTAAATTCAGTTGAATCATTTG
GAG
Alignments
Feature NameTypeLocationAnalysis
Pp06 chromosome Pp06:30722310..30722310. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr6 chromosome PAV_r1.0chr6:24567758..24567758. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)