scaffold_8:1247939

Marker Overview
Namescaffold_8:1247939
dbSNP IDN/A
SNP Array ID
Cherry 6+9K SNP array:scaffold_8:1247939
TypeSNP
SNP AllelesT/C
5' Flanking SequenceCAAAAGTATTTCTTGAAGATGCAAGCTCAAAATGCAAATTTCTTTTATGCAATTGATCTA GATGAAAGTGGTCGGTTACGAAATGTGTTTTGGGCAGATTC
3' Flanking SequenceAGGAGTAGGGCAGCATATGAGGAATTTGGTGATGCCATTACATTTGACACGACATACTTG ACAAATAAGTATGACATGCCATTTGCTCCATTTGTAGGTGT
SpeciesPrunus cerasus
Publication[view all]
ContactStijn Vanderzande
Commentntragenic SNPs representing the fruticosa subgenome of tart cherry identified by Peace et al (2012) but not used for the original 6K SNP array
Contact
NameDetails
Stijn Vanderzande
First name:Stijn
Last name:Vanderzande
Address:Laboratory for Fruit Breeding and Biotechnology - Willem de Croylaan 42 - B-3001 Heverlee - Belgium
Country:Belgium
Email:stijn.vanderzande@wsu.edu
Libraries
Library NameType
Cherry 6+9K SNP arraySNP_chip
Sequence
>scaffold_8:1247939 ID=scaffold_8:1247939; Name=scaffold_8:1247939; organism=Prunus cerasus; type=genetic_marker; length=203bp
CAAAAGTATTTCTTGAAGATGCAAGCTCAAAATGCAAATTTCTTTTATGC
AATTGATCTAGATGAAAGTGGTCGGTTACGAAATGTGTTTTGGGCAGATT
CYAGGAGTAGGGCAGCATATGAGGAATTTGGTGATGCCATTACATTTGAC
ACGACATACTTGACAAATAAGTATGACATGCCATTTGCTCCATTTGTAGG
TGT
Alignments
Feature NameTypeLocationAnalysis
Pp08 chromosome Pp08:1247883..1247883. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr4 chromosome PAV_r1.0chr4:22264410..22264410. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)