Tracing the diploid ancestry of the cultivated octoploid strawberry.

Publication Overview
TitleTracing the diploid ancestry of the cultivated octoploid strawberry.
AuthorsFeng C, Wang J, Harris AJ, Folta KM, Zhao M, Kang M
TypeJournal Article
Journal NameMolecular biology and evolution
Year2020
CitationFeng C, Wang J, Harris AJ, Folta KM, Zhao M, Kang M. Tracing the diploid ancestry of the cultivated octoploid strawberry.. Molecular biology and evolution. 2020 Sep 17.

Abstract

The commercial strawberry, Fragaria × ananassa, is a recent allo-octoploid that is cultivated worldwide. However, other than F. vesca, which is universally accepted one of its diploid ancestors, its other early diploid progenitors remain unclear. Here, we performed comparative analyses of the genomes of five diploid strawberries, F. iinumae, F. vesca, F. nilgerrensis, F. nubicola, and F. viridis, of which the latter three are newly sequenced. We found that the genomes of these species share highly conserved gene content and gene order. Using an alignment-based approach, we show that F. iinumae and F. vesca are the diploid progenitors to the octoploid F. × ananassa, whereas the other three diploids that we analyzed in this study are not parental species. We generated a fully resolved, dated phylogeny of Fragaria and determined that the genus arose ca. 6.37 million years ago. Our results effectively resolve conflicting hypotheses regarding the putative diploid progenitors of the cultivated strawberry, establish a reliable backbone phylogeny for the genus, and provide genetic resources for molecular breeding.

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PMID: PubMedPMID:32941604