AX-105175000

Marker Overview

Name

AX-105175000

dbSNP ID

N/A

SNP Array ID

50K SNP array for apple:

AX-105175000

Type

SNP

SNP Alleles

T/G

5' Flanking Sequence

TTTTGCTTCTTTGAAATGGGATGTGTTGAGGGCAG

3' Flanking Sequence

TGGTGTAATTAATATTTTGTTTCTCATATTCTTAT

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
50K SNP array for apple	SNP_chip

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-BB-F1	7	N/A	24.76	AX-105175000	View
2	Apple-NC-F1	7	N/A	42.82	AX-105175000	View
3	Apple-NCZFBB-consensus	7	N/A	30.87	AX-105175000	View
4	Apple-ZF-F1	7	N/A	33.95	AX-105175000	View

Sequence

>AX-105175000 ID=AX-105175000; Name=AX-105175000; organism=Malus x domestica; type=genetic_marker; length=71bp
TTTTGCTTCTTTGAAATGGGATGTGTTGAGGGCAGKTGGTGTAATTAATA
TTTTGTTTCTCATATTCTTAT

Alignments

Feature Name	Type	Location	Analysis
Chr07	chromosome	Chr07:19181066..19181066.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation