AX-105188988

Marker Overview

Name

AX-105188988

dbSNP ID

N/A

SNP Array ID

50K SNP array for apple:

AX-105188988

Type

SNP

SNP Alleles

A/G

5' Flanking Sequence

CCTGTGCCGCAGCCACTTCCTTCATTGGTTGACTT

3' Flanking Sequence

TGAATGCCCACAAGCGTGCTAAGAGGATATTTGAA

Species

Malus x domestica

Publication

[view all]

Libraries


Library Name	Type
50K SNP array for apple	SNP_chip

Publications


Year	Publication
2020	Rymenants M, van de Weg E, Auwerkerken A, De Wit I, Czech A, Nijland B, Heuven H, De Storme N, and Keulemans W. Detection of QTL for apple fruit acidity and sweetness using sensorial evaluation in multiple pedigreed full-sib families. Tree Genetics & Genomes 16, 71 (2020). https://doi.org/10.1007/s11295-020-01466-8

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Apple-BB-F1	1	N/A	3.24	AX-105188988	View
2	Apple-NC-F1	1	N/A	0.22	AX-105188988	View
3	Apple-NCZFBB-consensus	1	N/A	0	AX-105188988	View
4	Apple-ZF-F1	1	N/A	0.57	AX-105188988	View

Sequence

>AX-105188988 ID=AX-105188988; Name=AX-105188988; organism=Malus x domestica; type=genetic_marker; length=71bp
CCTGTGCCGCAGCCACTTCCTTCATTGGTTGACTTRTGAATGCCCACAAG
CGTGCTAAGAGGATATTTGAA

Alignments

Feature Name	Type	Location	Analysis
Chr01	chromosome	Chr01:1206868..1206868.	Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation