RESULTS SUMMARY
View contig list
Total sequences analysed = 40818
Sequences sorted into 5582 contigs and 0 singletons
Total SNPs detected = 623
Total consensus size = 5420231 bp
SNP frequency = 0.01/100 bp
Smallest contig = 2 sequences
Total transitions = 252
Total transversions = 137
Total indels = 234
2189 contigs containing 2 sequences
(0.00)% of these contigs contain snps
980 contigs containing 3 sequences
(0.00)% of these contigs contain snps
546 contigs containing 4 sequences
29(5.31)% of these contigs contain snps
with a total of 73 snps
376 contigs containing 5 sequences
(0.00)% of these contigs contain snps
223 contigs containing 6 sequences
5(2.24)% of these contigs contain snps
with a total of 6 snps
202 contigs containing 7 sequences
5(2.48)% of these contigs contain snps
with a total of 24 snps
136 contigs containing 8 sequences
10(7.35)% of these contigs contain snps
with a total of 35 snps
94 contigs containing 9 sequences
2(2.13)% of these contigs contain snps
with a total of 9 snps
93 contigs containing 10 sequences
4(4.30)% of these contigs contain snps
with a total of 24 snps
73 contigs containing 11 sequences
7(9.59)% of these contigs contain snps
with a total of 33 snps
67 contigs containing 12 sequences
7(10.45)% of these contigs contain snps
with a total of 28 snps
38 contigs containing 13 sequences
2(5.26)% of these contigs contain snps
with a total of 13 snps
45 contigs containing 14 sequences
3(6.67)% of these contigs contain snps
with a total of 12 snps
46 contigs containing 15 sequences
2(4.35)% of these contigs contain snps
with a total of 2 snps
29 contigs containing 16 sequences
(0.00)% of these contigs contain snps
30 contigs containing 17 sequences
(0.00)% of these contigs contain snps
24 contigs containing 18 sequences
1(4.17)% of these contigs contain snps
with a total of 7 snps
27 contigs containing 19 sequences
3(11.11)% of these contigs contain snps
with a total of 8 snps
29 contigs containing 20 sequences
2(6.90)% of these contigs contain snps
with a total of 8 snps
21 contigs containing 21 sequences
1(4.76)% of these contigs contain snps
with a total of 1 snps
14 contigs containing 22 sequences
(0.00)% of these contigs contain snps
18 contigs containing 23 sequences
1(5.56)% of these contigs contain snps
with a total of 3 snps
12 contigs containing 24 sequences
1(8.33)% of these contigs contain snps
with a total of 1 snps
10 contigs containing 25 sequences
2(20.00)% of these contigs contain snps
with a total of 2 snps
13 contigs containing 26 sequences
1(7.69)% of these contigs contain snps
with a total of 1 snps
10 contigs containing 27 sequences
(0.00)% of these contigs contain snps
16 contigs containing 28 sequences
(0.00)% of these contigs contain snps
18 contigs containing 29 sequences
5(27.78)% of these contigs contain snps
with a total of 11 snps
7 contigs containing 30 sequences
2(28.57)% of these contigs contain snps
with a total of 3 snps
8 contigs containing 31 sequences
(0.00)% of these contigs contain snps
7 contigs containing 32 sequences
1(14.29)% of these contigs contain snps
with a total of 1 snps
10 contigs containing 33 sequences
1(10.00)% of these contigs contain snps
with a total of 3 snps
5 contigs containing 34 sequences
2(40.00)% of these contigs contain snps
with a total of 5 snps
9 contigs containing 35 sequences
1(11.11)% of these contigs contain snps
with a total of 1 snps
9 contigs containing 36 sequences
(0.00)% of these contigs contain snps
8 contigs containing 37 sequences
(0.00)% of these contigs contain snps
5 contigs containing 38 sequences
2(40.00)% of these contigs contain snps
with a total of 18 snps
4 contigs containing 39 sequences
(0.00)% of these contigs contain snps
4 contigs containing 40 sequences
2(50.00)% of these contigs contain snps
with a total of 26 snps
5 contigs containing 41 sequences
3(60.00)% of these contigs contain snps
with a total of 5 snps
4 contigs containing 42 sequences
1(25.00)% of these contigs contain snps
with a total of 19 snps
8 contigs containing 43 sequences
1(12.50)% of these contigs contain snps
with a total of 1 snps
2 contigs containing 44 sequences
(0.00)% of these contigs contain snps
4 contigs containing 45 sequences
(0.00)% of these contigs contain snps
2 contigs containing 46 sequences
(0.00)% of these contigs contain snps
2 contigs containing 47 sequences
1(50.00)% of these contigs contain snps
with a total of 2 snps
4 contigs containing 48 sequences
2(50.00)% of these contigs contain snps
with a total of 2 snps
4 contigs containing 49 sequences
1(25.00)% of these contigs contain snps
with a total of 1 snps
4 contigs containing 51 sequences
1(25.00)% of these contigs contain snps
with a total of 1 snps
5 contigs containing 52 sequences
2(40.00)% of these contigs contain snps
with a total of 3 snps
3 contigs containing 53 sequences
(0.00)% of these contigs contain snps
1 contigs containing 54 sequences
(0.00)% of these contigs contain snps
1 contigs containing 55 sequences
(0.00)% of these contigs contain snps
2 contigs containing 56 sequences
1(50.00)% of these contigs contain snps
with a total of 1 snps
2 contigs containing 57 sequences
1(50.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 58 sequences
1(100.00)% of these contigs contain snps
with a total of 7 snps
3 contigs containing 59 sequences
(0.00)% of these contigs contain snps
1 contigs containing 60 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
4 contigs containing 63 sequences
1(25.00)% of these contigs contain snps
with a total of 3 snps
1 contigs containing 64 sequences
(0.00)% of these contigs contain snps
2 contigs containing 65 sequences
(0.00)% of these contigs contain snps
2 contigs containing 66 sequences
(0.00)% of these contigs contain snps
3 contigs containing 67 sequences
1(33.33)% of these contigs contain snps
with a total of 9 snps
1 contigs containing 68 sequences
1(100.00)% of these contigs contain snps
with a total of 4 snps
1 contigs containing 70 sequences
(0.00)% of these contigs contain snps
2 contigs containing 72 sequences
(0.00)% of these contigs contain snps
1 contigs containing 73 sequences
(0.00)% of these contigs contain snps
1 contigs containing 74 sequences
(0.00)% of these contigs contain snps
1 contigs containing 76 sequences
1(100.00)% of these contigs contain snps
with a total of 1 snps
3 contigs containing 77 sequences
1(33.33)% of these contigs contain snps
with a total of 1 snps
2 contigs containing 79 sequences
(0.00)% of these contigs contain snps
3 contigs containing 80 sequences
(0.00)% of these contigs contain snps
4 contigs containing 83 sequences
(0.00)% of these contigs contain snps
1 contigs containing 84 sequences
(0.00)% of these contigs contain snps
2 contigs containing 87 sequences
1(50.00)% of these contigs contain snps
with a total of 4 snps
1 contigs containing 88 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 89 sequences
1(100.00)% of these contigs contain snps
with a total of 41 snps
1 contigs containing 90 sequences
(0.00)% of these contigs contain snps
1 contigs containing 94 sequences
1(100.00)% of these contigs contain snps
with a total of 16 snps
1 contigs containing 95 sequences
1(100.00)% of these contigs contain snps
with a total of 1 snps
1 contigs containing 96 sequences
1(100.00)% of these contigs contain snps
with a total of 1 snps
2 contigs containing 100 sequences
2(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 101 sequences
(0.00)% of these contigs contain snps
1 contigs containing 104 sequences
(0.00)% of these contigs contain snps
1 contigs containing 110 sequences
(0.00)% of these contigs contain snps
1 contigs containing 123 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
2 contigs containing 128 sequences
2(100.00)% of these contigs contain snps
with a total of 3 snps
1 contigs containing 131 sequences
(0.00)% of these contigs contain snps
1 contigs containing 137 sequences
(0.00)% of these contigs contain snps
1 contigs containing 138 sequences
1(100.00)% of these contigs contain snps
with a total of 3 snps
2 contigs containing 139 sequences
1(50.00)% of these contigs contain snps
with a total of 1 snps
1 contigs containing 142 sequences
1(100.00)% of these contigs contain snps
with a total of 1 snps
1 contigs containing 157 sequences
(0.00)% of these contigs contain snps
1 contigs containing 164 sequences
1(100.00)% of these contigs contain snps
with a total of 3 snps
1 contigs containing 165 sequences
(0.00)% of these contigs contain snps
1 contigs containing 167 sequences
(0.00)% of these contigs contain snps
1 contigs containing 172 sequences
1(100.00)% of these contigs contain snps
with a total of 7 snps
1 contigs containing 178 sequences
1(100.00)% of these contigs contain snps
with a total of 4 snps
1 contigs containing 222 sequences
1(100.00)% of these contigs contain snps
with a total of 3 snps
1 contigs containing 256 sequences
1(100.00)% of these contigs contain snps
with a total of 9 snps
1 contigs containing 259 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 262 sequences
1(100.00)% of these contigs contain snps
with a total of 5 snps
1 contigs containing 277 sequences
1(100.00)% of these contigs contain snps
with a total of 9 snps
1 contigs containing 325 sequences
1(100.00)% of these contigs contain snps
with a total of 32 snps
1 contigs containing 435 sequences
(0.00)% of these contigs contain snps
1 contigs containing 568 sequences
1(100.00)% of these contigs contain snps
with a total of 18 snps
1 contigs containing 804 sequences
1(100.00)% of these contigs contain snps
with a total of 32 snps


(C)
Plant Biotechnology Centre Australia, DPI Comments/suggestions to Dave Edwards Dave.Edwards.vic.gov.au Best viewed at 800x600+ 