Cluster 1 Contig 5540

prev Summary   Contig List next

Size of Consensus sequence = 705

Number of sequences = 44

Minimum redundancy = 6

Key

A
B
C
D
E
F
G
H
I
J
K
L
M
N
O
P
Q
R
S
T
U
V
W
X
Y
Z
a
b
c
d
e
f
g
h
i
j
k
l
m
n
o
p
q
r

16 SNPs detected


A B C D E F G H I J K L M N O P Q R S T U V W X Y Z a b c d e f g h i j k l m n o p q r cosegregation weighted

55 G G . . G T T T T T . . T T T T . G G . . . T T T T T . T G T T T G G . . . . T T T . . 16/16 65.91 102 G G C G G C C C C C . C C C C C . G G . . . C C C C C . C G C C C G G G . . C C C C . . 16/16 77.27 281 A A G A A G G G G G . G G G G G . A A A A A G G G G G G G A G G G A A A . A G G G G G . 16/16 90.91 347 T T C T T C C C C C C C C C C C T T T T T T C C C C C C C T C C C T T T T T C C C C C . 16/16 97.73 348 G G A G G A A A A A A A A A A A G G G G G G A A A A A A A G A A A G G G G G A A A A A . 16/16 97.73 361 G G A G G A A A A A A A A A A A G G G G G G A A A A A A A G A A A G G G G G A A A A A . 16/16 97.73 411 A A T A A T T T T T T T T T T T A A A A T A T T T T T T T A T T T A A A A A T T T T T . 16/16 97.73 429 G G A G G A A A A A A A A A A A G G G G T G A A A A A A A G A A A G G G G G A A A A A . 16/16 97.73 437 T T C T T C C C C C C C C C C C T T T T C T C C C C C C C T C C C T T T T T C C C C C . 16/16 97.73 505 . G . G G A A A A A A A A A A A G G G G G G A A A A A A A G A A A G G G G G A A A A A A 16/16 95.45 517 . G . G G A A A A A A A A A A A G G G G G G A A A A A A A G A A A G G G G G A A A A A A 16/16 95.45 537 . . . . A G G G G G G G G G G G A A A A A A G G G G G G G A G G G A A A A A G G G G G G 16/16 90.91 545 . . . . A G G G G G G G G G G G A A A A A A G G G G G G G A G G G A A A A A G G G G G G 16/16 90.91 571 . . . . A C C C C C C C C C C C A A A A A A C C C C C C C A C C C A A A A A C C C C C - 16/16 90.91 573 . . . . . G G G G G G G G G G G A A A . A A G G G G G G G A G G G A A A A A G G G G G G 16/16 86.36 580 . . . . . C . C C C C C C C C C T T T . T T C C C C C C C T C C C T T T T T C C C C C C 16/16 84.09