PBC Bioinformatics |
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RESULTS SUMMARY
View contig list
Total sequences analysed = 3031
Sequences sorted into 705 contigs and 0 singletons
Total SNPs detected = 316
Total consensus size = 462989 bp
SNP frequency = 0.07/100 bp
Smallest contig = 2 sequences
Total transitions = 143
Total transversions = 85
Total indels = 88
397 contigs containing 2 sequences
(0.00)% of these contigs contain snps
134 contigs containing 3 sequences
(0.00)% of these contigs contain snps
56 contigs containing 4 sequences
26(46.43)% of these contigs contain snps
with a total of 67 snps
38 contigs containing 5 sequences
(0.00)% of these contigs contain snps
15 contigs containing 6 sequences
2(13.33)% of these contigs contain snps
with a total of 4 snps
10 contigs containing 7 sequences
3(30.00)% of these contigs contain snps
with a total of 12 snps
5 contigs containing 8 sequences
2(40.00)% of these contigs contain snps
with a total of 2 snps
4 contigs containing 9 sequences
2(50.00)% of these contigs contain snps
with a total of 11 snps
11 contigs containing 10 sequences
5(45.45)% of these contigs contain snps
with a total of 14 snps
10 contigs containing 11 sequences
1(10.00)% of these contigs contain snps
with a total of 10 snps
4 contigs containing 12 sequences
2(50.00)% of these contigs contain snps
with a total of 9 snps
3 contigs containing 13 sequences
(0.00)% of these contigs contain snps
1 contigs containing 14 sequences
1(100.00)% of these contigs contain snps
with a total of 11 snps
2 contigs containing 15 sequences
(0.00)% of these contigs contain snps
1 contigs containing 17 sequences
1(100.00)% of these contigs contain snps
with a total of 8 snps
1 contigs containing 20 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
1 contigs containing 21 sequences
1(100.00)% of these contigs contain snps
with a total of 3 snps
1 contigs containing 24 sequences
1(100.00)% of these contigs contain snps
with a total of 1 snps
1 contigs containing 26 sequences
1(100.00)% of these contigs contain snps
with a total of 8 snps
3 contigs containing 27 sequences
3(100.00)% of these contigs contain snps
with a total of 15 snps
1 contigs containing 30 sequences
1(100.00)% of these contigs contain snps
with a total of 4 snps
1 contigs containing 44 sequences
1(100.00)% of these contigs contain snps
with a total of 2 snps
2 contigs containing 54 sequences
2(100.00)% of these contigs contain snps
with a total of 37 snps
1 contigs containing 104 sequences
1(100.00)% of these contigs contain snps
with a total of 35 snps
1 contigs containing 121 sequences
1(100.00)% of these contigs contain snps
with a total of 25 snps
1 contigs containing 238 sequences
1(100.00)% of these contigs contain snps
with a total of 36 snps
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Plant Biotechnology Centre Australia, DPI Comments/suggestions to Dave Edwards Dave.Edwards.vic.gov.au Best viewed at 800x600+ |
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