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Transcript Overview
Name | DREB2-3 |
Unique Name | JQ669818.1-DREB2-3.m1 |
Type | mRNA |
Organism | Malus x domestica (Apple) |
Source | genbank |
Product | dehydration-responsive element-binding protein (DREB2) |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
JQ669818.1-DREB2-3.m1-cds1 | JQ669818.1-DREB2-3.m1-cds1 | Malus x domestica | CDS |
The following polypeptide feature(s) derives from this mRNA:
Feature Name | Unique Name | Species | Type |
DREB2-3 | JQ669818.1-DREB2-3.p1 | Malus x domestica | polypeptide |
Cross References
External references for this mRNA
Alignments
Feature Name | Type | Location | Analysis |
JQ669818 |
region |
JQ669818:1..1260+ |
NCBI Rosaceae gene and mRNA sequences |
Chr12 |
chromosome |
Chr12:25979978..25981671- |
Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation |
chr12 |
chromosome |
chr12:25157603..25159296+ |
Malus x domestica Whole Genome v1.0 Assembly & Annotation |
Sequences
The
following sequences are available for this feature:
mRNA sequence >JQ669818.1-DREB2-3.m1 ID=JQ669818.1-DREB2-3.m1; Name=DREB2-3; organism=Malus x domestica; type=mRNA; length=1260bp atggcgtccgaggcttccgacggggataggaaattgcggaagaggcgcta cgggtgcgattcgatagaggacactctggctaggtggaagaactacaatg agaggcttgattttgaaaaagatggagggaagaagactcggagggttccc gcgaagggctccacaaaagggtgtatgagagggaaaggagggcctgagaa ctccgcttgtgtttacaggggtgttaggcagaggacttggggaaaatggg tggcggaaatccgagaaccgattcacgctacaggcggcgctgtaccgaag aagaagaataaccgtctttggcttgggactttccctacagcctgggaagc tgcacttgcttatgataaagctgcttgggcaatttatggtgcttcggccc ggctcaacttcgcaaagaacaccatggatttgaaggactcctgctctaat tttgtgtcacccacaacgactaaaccatcgtcctacgagtcatcgtcaac atataacagtgcggatcaggcaaaggaaagatcgggtttctttgaggact gtctgcccggagagccgaagcaggaaatggtttgtgctgtgggattggtg actgaggaattagagctttccaatgctaccttaagagacggttgcaaccc ttcaaatgatgtcaaatttgagacaccggcaatgagggaagcagtggtga aagagttcccggtgattctggaatctggaagccaaaatggcttagatgat atgtacaacaatatgcataacgagcagaaaaatgttcaatctgatgatgc tggaatgaagggatcgataactggtcaacaattgcagggaggtttagcag aaactacgaaattaaatggccataatcacgatggcttcatacatacttat gcttacttagatgacttagacgataagtacaacaatagtccaggttatgg catcaatgcatcgaatgacatcggaatgcagagggagctctacgacagac ttgactacatgcataactgctggtctgcagaaaaaacctatggcattgat gctgctcaagaacaacaatgggagaggatgatgcattgtctccctataca atttcagacacaaccacaagtcgacatacctggaagctcgaatcatacgc aggacggatatttagacgtggatttcgattcagatttagttagacaaagc tatcattccggtgtaatggaagagcaggggctgcattattcatggttccc ttactcttag back to topprotein sequence of DREB2-3 >JQ669818.1-DREB2-3.p1 ID=JQ669818.1-DREB2-3.p1; Name=DREB2-3; organism=Malus x domestica; type=polypeptide; length=419bp MASEASDGDRKLRKRRYGCDSIEDTLARWKNYNERLDFEKDGGKKTRRVP AKGSTKGCMRGKGGPENSACVYRGVRQRTWGKWVAEIREPIHATGGAVPK KKNNRLWLGTFPTAWEAALAYDKAAWAIYGASARLNFAKNTMDLKDSCSN FVSPTTTKPSSYESSSTYNSADQAKERSGFFEDCLPGEPKQEMVCAVGLV TEELELSNATLRDGCNPSNDVKFETPAMREAVVKEFPVILESGSQNGLDD MYNNMHNEQKNVQSDDAGMKGSITGQQLQGGLAETTKLNGHNHDGFIHTY AYLDDLDDKYNNSPGYGINASNDIGMQRELYDRLDYMHNCWSAEKTYGID AAQEQQWERMMHCLPIQFQTQPQVDIPGSSNHTQDGYLDVDFDSDLVRQS YHSGVMEEQGLHYSWFPYS back to topmRNA from alignment at JQ669818:1..1260+ Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below. >JQ669818.1-DREB2-3.m1 ID=JQ669818.1-DREB2-3.m1; Name=DREB2-3; organism=Malus x domestica; type=mRNA; length=1260bp; location=Sequence derived from: JQ669818:1..1260+ (Malus x domestica atggcgtccgaggcttccgacggggataggaaattgcggaagaggcgcta
cgggtgcgattcgatagaggacactctggctaggtggaagaactacaatg
agaggcttgattttgaaaaagatggagggaagaagactcggagggttccc
gcgaagggctccacaaaagggtgtatgagagggaaaggagggcctgagaa
ctccgcttgtgtttacaggggtgttaggcagaggacttggggaaaatggg
tggcggaaatccgagaaccgattcacgctacaggcggcgctgtaccgaag
aagaagaataaccgtctttggcttgggactttccctacagcctgggaagc
tgcacttgcttatgataaagctgcttgggcaatttatggtgcttcggccc
ggctcaacttcgcaaagaacaccatggatttgaaggactcctgctctaat
tttgtgtcacccacaacgactaaaccatcgtcctacgagtcatcgtcaac
atataacagtgcggatcaggcaaaggaaagatcgggtttctttgaggact
gtctgcccggagagccgaagcaggaaatggtttgtgctgtgggattggtg
actgaggaattagagctttccaatgctaccttaagagacggttgcaaccc
ttcaaatgatgtcaaatttgagacaccggcaatgagggaagcagtggtga
aagagttcccggtgattctggaatctggaagccaaaatggcttagatgat
atgtacaacaatatgcataacgagcagaaaaatgttcaatctgatgatgc
tggaatgaagggatcgataactggtcaacaattgcagggaggtttagcag
aaactacgaaattaaatggccataatcacgatggcttcatacatacttat
gcttacttagatgacttagacgataagtacaacaatagtccaggttatgg
catcaatgcatcgaatgacatcggaatgcagagggagctctacgacagac
ttgactacatgcataactgctggtctgcagaaaaaacctatggcattgat
gctgctcaagaacaacaatgggagaggatgatgcattgtctccctataca
atttcagacacaaccacaagtcgacatacctggaagctcgaatcatacgc
aggacggatatttagacgtggatttcgattcagatttagttagacaaagc
tatcattccggtgtaatggaagagcaggggctgcattattcatggttccc
ttactcttag back to topCoding sequence (CDS) from alignment at JQ669818:1..1260+ >JQ669818.1-DREB2-3.m1 ID=JQ669818.1-DREB2-3.m1; Name=DREB2-3; organism=Malus x domestica; type=CDS; length=1260bp; location=Sequence derived from: JQ669818:1..1260+ (Malus x domestica atggcgtccgaggcttccgacggggataggaaattgcggaagaggcgcta cgggtgcgattcgatagaggacactctggctaggtggaagaactacaatg agaggcttgattttgaaaaagatggagggaagaagactcggagggttccc gcgaagggctccacaaaagggtgtatgagagggaaaggagggcctgagaa ctccgcttgtgtttacaggggtgttaggcagaggacttggggaaaatggg tggcggaaatccgagaaccgattcacgctacaggcggcgctgtaccgaag aagaagaataaccgtctttggcttgggactttccctacagcctgggaagc tgcacttgcttatgataaagctgcttgggcaatttatggtgcttcggccc ggctcaacttcgcaaagaacaccatggatttgaaggactcctgctctaat tttgtgtcacccacaacgactaaaccatcgtcctacgagtcatcgtcaac atataacagtgcggatcaggcaaaggaaagatcgggtttctttgaggact gtctgcccggagagccgaagcaggaaatggtttgtgctgtgggattggtg actgaggaattagagctttccaatgctaccttaagagacggttgcaaccc ttcaaatgatgtcaaatttgagacaccggcaatgagggaagcagtggtga aagagttcccggtgattctggaatctggaagccaaaatggcttagatgat atgtacaacaatatgcataacgagcagaaaaatgttcaatctgatgatgc tggaatgaagggatcgataactggtcaacaattgcagggaggtttagcag aaactacgaaattaaatggccataatcacgatggcttcatacatacttat gcttacttagatgacttagacgataagtacaacaatagtccaggttatgg catcaatgcatcgaatgacatcggaatgcagagggagctctacgacagac ttgactacatgcataactgctggtctgcagaaaaaacctatggcattgat gctgctcaagaacaacaatgggagaggatgatgcattgtctccctataca atttcagacacaaccacaagtcgacatacctggaagctcgaatcatacgc aggacggatatttagacgtggatttcgattcagatttagttagacaaagc tatcattccggtgtaatggaagagcaggggctgcattattcatggttccc ttactcttag back to top
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