MDP0000596919, MDP0000596919 (mRNA) Malus spp. (apple)

Transcript Overview
NameMDP0000596919
Unique NameMDP0000596919
TypemRNA
OrganismMalus x domestica (Apple)
Sequence length1299
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MDP0000596919_exon_1MDP0000596919_exon_1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MDP0000596919MDP0000596919Malus x domesticapolypeptide


Homology
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|356545259|ref|XP_003541062.1| (PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear-like [Glycine max])

HSP 1 Score: 357.451 bits (916), Expect = 3.021e-96
Identity = 185/273 (67.77%), Postives = 212/273 (77.66%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI--XXXXXXXXXXXXXXXXXXXXNAHGDGMG 813
            MD TKKRKLDENG + + D S   KLSP DAR+LIERFT DQLLDILQD ++RH DVL AVR+++DPD SQRKLFIRGLGWDTTT+GLRSLFS YG+LEEA+VILDK TGKSKGYGFVTFRHVD AL+AL+EPSK+IDGR+TVTQL                DV+LRKIYVANVP D+P+DKLLAHF++YGEIEEGPLGFDKQTGK KG+ALFVYK+PEGA+AAL+DP K +EGRQL CKLAI                      + HGDG+G
Sbjct:    1 MDPTKKRKLDENGFI-NNDSSEPLKLSPSDARKLIERFTTDQLLDILQDTVARHPDVLAAVRAVSDPDVSQRKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYGFVTFRHVDGALLALREPSKRIDGRVTVTQL---AAAGNSALNANAVDVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAKAALIDPMKTVEGRQLSCKLAITDGKQGKRSGPDSGQAHHGNVQHGHGDGVG 269

HSP 2 Score: 65.855 bits (159), Expect = 1.817e-8
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA---YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YP+ GHYGLSA   YQNQHH  +G SP+PRVP   MYPNVPPY+
Sbjct:  396 YPDSGHYGLSASSGYQNQHHPPSGASPVPRVPP--MYPNVPPYY 437
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|225461628|ref|XP_002285377.1| (PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera] >gi|147789426|emb|CAN66609.1| hypothetical protein VITISV_017556 [Vitis vinifera])

HSP 1 Score: 356.681 bits (914), Expect = 5.153e-96
Identity = 186/272 (68.38%), Postives = 210/272 (77.21%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAIXXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD+TKKRK+DENG+V  TD  S  KL+PEDAR++IE F  DQLL+ILQ+A  RH+DVLDA+RSIAD D +QRKLFIRGLGWDTTTEGLR LFSAYGELEEA+VILDK T KSKGYGFVTF+HVD AL+ALKEPSKKIDGRMTVTQL                DVS+RKIYVANVP DMP+D+LLAHF+ YGEIEEGPLGFDKQTGK +G+ALFVYKT E AQAALVDP K I+GRQL+CKLAI                      HGDG+G+
Sbjct:    1 MDATKKRKMDENGLV-STDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDAIRSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFKHVDGALLALKEPSKKIDGRMTVTQL-AASGLSGPASNASAVDVSMRKIYVANVPVDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLAIEGKKGKTGGPAQAPTGVPGEAGHGDGLGV 270

HSP 2 Score: 65.4698 bits (158), Expect = 2.373e-8
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 1 
Query: 1174 YPEGGHYGLS---AYQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YP+ GHY LS   AY +Q HQ AGTSP+PRVP GGMYP+ PPY+
Sbjct:  406 YPDSGHYSLSSSSAYPSQIHQPAGTSPVPRVPPGGMYPSGPPYY 449
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|356517062|ref|XP_003527209.1| (PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear-like [Glycine max])

HSP 1 Score: 356.295 bits (913), Expect = 6.730e-96
Identity = 185/273 (67.77%), Postives = 212/273 (77.66%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI--XXXXXXXXXXXXXXXXXXXXNAHGDGMG 813
            MD TKKRKLDENG   + D S   KLSP + R+LIERFT DQLLDILQDA++RH+DVL AVR++ADPD SQRKLFIRGLGWDTTT+GLRSLFS +G+LEEA+VILDK TGKSKGYGFVTFRHVD AL+AL+EPSK+IDGR+TVTQL                DV+LRKIYVANVP D+P+DKLLAHF++YGEIEEGPLGFDKQTGK KG+ALFVYK+PEGAQAAL+DP K +EGRQL CKLAI                      + HGDG+G
Sbjct:    1 MDPTKKRKLDENGFN-NNDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLDVLAAVRAVADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFRHVDGALLALREPSKRIDGRVTVTQL---AAAGNSASNVNPADVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSCKLAITDGKQGKRVGPDSAQAHHGNVQHGHGDGVG 269

HSP 2 Score: 74.3294 bits (181), Expect = 5.108e-11
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA---YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YP+ GHYGLSA   YQNQHH  +GTSP+PRVP G MYPN+PPY+
Sbjct:  382 YPDSGHYGLSASSGYQNQHHPPSGTSPMPRVPPGSMYPNMPPYY 425
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|224061320|ref|XP_002300424.1| (predicted protein [Populus trichocarpa] >gi|222847682|gb|EEE85229.1| predicted protein [Populus trichocarpa])

HSP 1 Score: 353.214 bits (905), Expect = 5.697e-95
Identity = 180/249 (72.29%), Postives = 206/249 (82.73%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAP-KLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL-----XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            MD TKKRKL+ENG+V  T    +P KL+P+DAR+++ERFTPDQLLDILQ+A+ RH D+L+AVRSIADPDA+QRKLFIRGLGW+TTTE LR+LFS YGELEEA+VILDK TGKSKGYGFV ++HVD AL+ALKEPSKKIDGR+TVTQL                     DV++RKIYVANVPY+MPSDKLL HFA YGEIEEGPLGFDKQTGK KG+ALFVYKT EGAQAAL++P K IEGRQL CKLAI
Sbjct:    1 MDPTKKRKLEENGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDILEAVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVIYKHVDGALLALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANVPYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEGRQLNCKLAI 249
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|15232459|ref|NP_188119.1| (RNA recognition motif-containing protein [Arabidopsis thaliana] >gi|42572443|ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] >gi|8777484|dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] >gi|17380744|gb|AAL36202.1| putative RNA-binding protein [Arabidopsis thaliana] >gi|20259621|gb|AAM14167.1| putative RNA-binding protein [Arabidopsis thaliana] >gi|222422941|dbj|BAH19456.1| AT3G15010 [Arabidopsis thaliana] >gi|332642081|gb|AEE75602.1| RNA recognition motif-containing protein [Arabidopsis thaliana] >gi|332642082|gb|AEE75603.1| RNA recognition motif-containing protein [Arabidopsis thaliana])

HSP 1 Score: 327.791 bits (839), Expect = 2.563e-87
Identity = 174/276 (63.04%), Postives = 203/276 (73.55%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSA---PKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI-XXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD  KKRKLDENG  L+T+        +LSP+DAR++IERFT DQLLD+LQ+A+ RH DVL++VR  AD D SQRKLFIRGL  DTTTEGLRSLFS+YG+LEEAIVILDK TGKSKGYGFVTF HVD AL+ALKEPSKKIDGR+TVTQL                D+S+RKIYVANVP+DMP+D+LL HF  YG++EEGPLGFDK TGK +G+ALFVYKT EGAQAAL DP K I+G+ L CKLA+                     + HG+GMGM
Sbjct:    1 MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQL---AASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGM 273

HSP 2 Score: 68.9366 bits (167), Expect = 2.146e-9
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA---YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YPE GHYGLS+   Y  QHHQ  GTSP+PRVP GGMYPN PP +
Sbjct:  361 YPESGHYGLSSSAGYPGQHHQAVGTSPVPRVPHGGMYPNGPPNY 404
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|379061692|gb|AFC89654.1| (RBP42 [Elaeis guineensis])

HSP 1 Score: 324.324 bits (830), Expect = 2.834e-86
Identity = 168/244 (68.85%), Postives = 196/244 (80.33%), Query Frame = 1 
Query:    1 MDST-KKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            MD T KKRK DENG V+    +S   L+PEDAR+++E FT + LLDI+++A+ R   VLDAVR+IAD D +QRKLFIRGLGW+TTTE LR+LFS+YGELEEA+VI+DK TGKSKGYGF+TFRH+D AL+ALKEPSKKIDGRMTVTQL                DVSLRKIYV NVP DMPSD+LLAHF+ YGEIEEGPLGFDKQTGK +G+ALFVYKT EGA A+LVDP KNI+G  L+CKLAI
Sbjct:    1 MDPTSKKRKSDENGAVV----ASPALLTPEDARKIVEPFTREHLLDIVREAMCRDAGVLDAVRAIADRDPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHIDGALLALKEPSKKIDGRMTVTQL---AAAGTTAAAPPAIDVSLRKIYVGNVPADMPSDRLLAHFSSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLAI 237
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|297830052|ref|XP_002882908.1| (hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp. lyrata] >gi|297328748|gb|EFH59167.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 320.857 bits (821), Expect = 3.133e-85
Identity = 173/277 (62.45%), Postives = 199/277 (71.84%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSA---PKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI--XXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD  KKRKLDENG  L T+        +L+P+DAR++IERFT DQLLD+LQ+A+ RH DVLD+VRS AD D SQRKLFIRGL  DTTTEGL SLFS YG+LEEAIVILDK TGKSKGYGFVTF HVD AL+ALKEPSKKIDGR+TVTQL                D+S+RKIYVANVP+DMP+D+LL HF  YG++EEGPLGFDK TGK +G+ALFVYKT EGAQ AL DP K I+G+ L CKLA+                      + HGD MGM
Sbjct:    1 MDMMKKRKLDENGGGLITNGGGIIGPTRLTPQDARKIIERFTTDQLLDLLQEAIVRHPDVLDSVRSTADSDISQRKLFIRGLAADTTTEGLLSLFSNYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQL---AASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQTALADPVKVIDGKHLNCKLAVDGKKGGGKPGMPQAQDGGSGHGHVHGDVMGM 274

HSP 2 Score: 68.9366 bits (167), Expect = 2.146e-9
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA---YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YPE GHYGLS+   Y  QHHQ  GTSP+PRVP GGMYPN PP +
Sbjct:  361 YPESGHYGLSSSTGYPGQHHQAVGTSPVPRVPHGGMYPNGPPNY 404
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|297853100|ref|XP_002894431.1| (hypothetical protein ARALYDRAFT_892356 [Arabidopsis lyrata subsp. lyrata] >gi|297340273|gb|EFH70690.1| hypothetical protein ARALYDRAFT_892356 [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 317.775 bits (813), Expect = 2.653e-84
Identity = 170/275 (61.82%), Postives = 200/275 (72.73%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDP---SSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAIXXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD  KKRKLDENG+ +  D    S + +L P+DAR++IERF+ DQLLDILQ+A+ RH DVL+ VR  AD D SQRKLFIRGL  +TTTEGLRSLFS YG+L+EAIVILDK T KSKGYGFVTF+HVD AL+ALKEPSKKIDGR+TVTQL                D+S+RKIYVANVP+DMP+D+LL  F  YG+IEEGPLGFDK TGK +G+ALFVYKT EGAQAAL +P K ++G+ L CKLAI                    + HGDGMGM
Sbjct:    1 MDMLKKRKLDENGIGMLNDGINGSVSSRLMPQDARKIIERFSTDQLLDILQEAVVRHTDVLEIVRLTADSDISQRKLFIRGLAAETTTEGLRSLFSNYGDLDEAIVILDKVTAKSKGYGFVTFKHVDGALLALKEPSKKIDGRVTVTQL--AAAGNQGTTNSHVSDISMRKIYVANVPFDMPADRLLNQFLAYGDIEEGPLGFDKITGKSRGFALFVYKTAEGAQAALAEPMKVVDGKNLQCKLAI-DGKKGKPPGQDGGAGVGHGHGHGDGMGM 272

HSP 2 Score: 60.077 bits (144), Expect = 9.969e-7
Identity = 29/44 (65.91%), Postives = 32/44 (72.73%), Query Frame = 1 
Query: 1174 YPEGGHYG---LSAYQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YPE GHYG    SAY  QH Q  G+SP+PRVP GGMYPNVPP +
Sbjct:  378 YPESGHYGHSSASAYPAQH-QPVGSSPVPRVPLGGMYPNVPPNY 420
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|255563118|ref|XP_002522563.1| (Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis] >gi|223538254|gb|EEF39863.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus communis])

HSP 1 Score: 301.597 bits (771), Expect = 1.967e-79
Identity = 154/247 (62.35%), Postives = 187/247 (75.71%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPK---LSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL-XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            MD TKKRK DENG    T  SS P    LSP+D R++IE FT +QLL+ILQ+A +RH DVL++VR++AD D S RKLFIRGL  +TTTE +R+LF+ YGELEEAIVI DK TGKSKG+GF+TF+HVD AL+ALKEPSKKIDGRMTVTQL                 DVS RKIYV NVPY++PS++LL  F  YGE+EEGPLGFDK TGK KG+A  +YKT EGA+AA+ DP K I+G Q++CK+A+
Sbjct:    1 MDFTKKRKADENGTTTITTTSSPPPTTTLSPQDIRKIIEPFTKEQLLEILQNAATRHADVLESVRTLADSDISLRKLFIRGLSSETTTETIRNLFNNYGELEEAIVIFDKNTGKSKGFGFITFKHVDGALIALKEPSKKIDGRMTVTQLASAGLSNSSINSSGGGSDVSARKIYVGNVPYNIPSERLLGFFLNYGEVEEGPLGFDKSTGKSKGFAFIIYKTEEGAKAAIADPVKMIDGHQVVCKMAV 247
[Close]
BLAST of MDP0000596919 vs. NCBI nr
Match: gi|242058013|ref|XP_002458152.1| (hypothetical protein SORBIDRAFT_03g027820 [Sorghum bicolor] >gi|241930127|gb|EES03272.1| hypothetical protein SORBIDRAFT_03g027820 [Sorghum bicolor])

HSP 1 Score: 290.426 bits (742), Expect = 4.535e-76
Identity = 154/248 (62.10%), Postives = 182/248 (73.39%), Query Frame = 1 
Query:   10 TKKRKLDENGVVLDTDPSSAPKL--SPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            +KKRK DENG V  +    A  L  + +D  RL+E  + DQL DI   A       LDAVR+ AD D + RKLF+RGLGW+TT++ LR++FSAYG+LEEA+VI DKTTG+SKGYGFVTFRH DSA++ALKEPSKKIDGRMTVTQL                      DV+LRKI+V NVP DMPS++LLAHFA YGEIEEGPLGFDKQTGK +G+ALFVYKTPEGAQA+LVD  K I+G QL+CKLAI
Sbjct:    5 SKKRKPDENGAVTASPAGGAATLGLTRDDVLRLLEPLSRDQLADIAAAAALVSAHALDAVRAAADRDPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKTTGRSKGYGFVTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPSGGAAGSGGAPVADVALRKIFVGNVPADMPSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLAI 252
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01037491001 (assembled CDS)

HSP 1 Score: 198.749 bits (504), Expect = 3.988e-51
Identity = 103/228 (45.18%), Postives = 143/228 (62.72%), Query Frame = 1 
Query:   49 DTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL-XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            D +      +  E+  +L+E F+ +QLL +L++A+ ++ D +D+VR +AD D + RK+F+ GLGWDTT E L S+F  YGE+E+   + DK +GKSKGY F+ F+H   A  ALK+P KKI  RMT  QL                 + + RKI+V+NV  ++   KLL  FA +GEIEEGPLG DK TGK KG+ALFVYK+ E ++ AL +P K  EG  L C+ AI
Sbjct:  117 DQEGDDEGDVEDEEIEKLLEPFSKEQLLALLREAVEKYPDFVDSVRRLADADPAHRKIFVHGLGWDTTAETLTSVFGKYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAGPVPAPPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFALFVYKSIESSRRALEEPHKIFEGHTLHCQKAI 344
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01022197001 (assembled CDS)

HSP 1 Score: 192.971 bits (489), Expect = 2.189e-49
Identity = 101/238 (42.44%), Postives = 143/238 (60.08%), Query Frame = 1 
Query:   13 KKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            K +K+++      +D  S      +  ++L+E ++ DQL+  + DA +    +   +R  AD D S RK+F+ GLGWDTT E L + F  YG++E+  V+ D+ TGK+KGYGFV F+    A+ ALK+P KKI+ RMT +QL                D   RKIYV+NV  D+  ++L + FA +GEIE GP+GFD QTGK +G+ALFVYK  E A+ AL DP +  EG QL C+ A
Sbjct:   39 KSKKVEKALATKPSDSDSDSDSGFDKLQKLLEPYSKDQLIGFISDAAASDSSLFQRIRETADRDVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAVKALKQPGKKINNRMTQSQL----ASMGPSPPPQSQDTVGRKIYVSNVQADVDPERLRSFFAKFGEIETGPIGFDTQTGKSRGFALFVYKNQESARKALEDPYRIFEGHQLHCQKA 272
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01033516001 (assembled CDS)

HSP 1 Score: 187.193 bits (474), Expect = 1.201e-47
Identity = 99/244 (40.57%), Postives = 149/244 (61.07%), Query Frame = 1 
Query:    1 MDSTKKRKLDE--NGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            M+  KKRKL+E  NG +           SPE+ + L++  +  QL+D+L    S++  + + ++S+A  D   RKLF+RGL W+TT+E L + F  +GE+EE  VI+DKTTGKS+GYGF+T++H++S   AL+ PSK IDGRM V  L                D + RK+Y+  +  D+ S+ LL+ F  +GEIEEG + +DK+T + +G+    YKT E A+ A+ DP K + GR ++ KLA
Sbjct:    1 MEDLKKRKLEEASNGQISS---------SPEELKLLLDPLSKSQLVDLLSKLGSQYPSIAEEIKSVASADPVHRKLFVRGLAWNTTSETLCAAFRLHGEIEEGAVIVDKTTGKSRGYGFITYKHMESTQSALQAPSKLIDGRMAVCNL----ACEGLSGASTTPDQAQRKLYIGGLAPDVTSEVLLSFFGRHGEIEEGSVAYDKETNESRGFGFVTYKTVEAAKKAIDDPQKFLGGRSIIVKLA 231
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01037490001 (assembled CDS)

HSP 1 Score: 173.326 bits (438), Expect = 1.794e-43
Identity = 90/211 (42.65%), Postives = 124/211 (58.77%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLC 717
            E  R+L++ F  DQ++ +L++A   +   L  +    + D   RK+F+ GLGWD T E L S F  YG++EE  V+ DK TG+SKGYGFV F+    A  ALK+P KKI  RM    L                DV+ R++YV NV   + ++KL   FA +GEIE+GPLGFDK TGK +G+A+ V+KT EG + AL +P K  E  +L C
Sbjct:  169 ETIRKLLQPFGKDQIIALLKEAADSNPATLSKILPAVESDPVHRKIFVHGLGWDATNETLTSAFKQYGQIEECNVVTDKITGRSKGYGFVLFKTRSGARKALKQPQKKIGNRMAACHL--AAAGPSGSNPAAGADVNERRLYVGNVGPQISAEKLRTFFAKFGEIEDGPLGFDKATGKFRGFAIIVFKTAEGMKRALEEPIKTFESCKLQC 377

HSP 2 Score: 61.6178 bits (148), Expect = 7.610e-10
Identity = 32/76 (42.11%), Postives = 44/76 (57.89%), Query Frame = 1 
Query:  499 RKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            RKI+V  + +D  ++ L + F  YG+IEE  +  DK TG+ KGY   ++KT  GA+ AL  P K I  R   C LA
Sbjct:  212 RKIFVHGLGWDATNETLTSAFKQYGQIEECNVVTDKITGRSKGYGFVLFKTRSGARKALKQPQKKIGNRMAACHLA 287
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01027434001 (assembled CDS)

HSP 1 Score: 85.1149 bits (209), Expect = 6.427e-17
Identity = 37/73 (50.68%), Postives = 52/73 (71.23%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGR 420
            D +  K+F+ GL W+T  + +R  F  +GE++EA+VI DK TG+SKGYGFVTF+  D+A+ A + PS  IDGR
Sbjct:   12 DTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDAAMRACQNPSPVIDGR 84

HSP 2 Score: 60.4622 bits (145), Expect = 1.695e-9
Identity = 28/80 (35.00%), Postives = 45/80 (56.25%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            D +  KI+V  + ++   D +  +F  +GEI+E  +  DK TG+ KGY    +K P+ A  A  +P+  I+GR+  C LA
Sbjct:   12 DTTYTKIFVGGLAWETQRDTMRRYFEQFGEIQEAVVITDKNTGRSKGYGFVTFKDPDAAMRACQNPSPVIDGRRANCNLA 91
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01013430001 (assembled CDS)

HSP 1 Score: 82.8037 bits (203), Expect = 3.190e-16
Identity = 52/151 (34.44%), Postives = 70/151 (46.36%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDV--------SLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGY 630
            D +  K+F+ GL W+T +E +R  F  +GE+ EA+VI DK TG+SKGYGFVTFR  +SA  A  +P+  IDGR     L                 V        + R  YV N  Y  P         +Y      P   + ++G C GY
Sbjct:   28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLASLGRPRPSMSYGRLRPVTPYLGSVPATRGSYVGNFGYQQPVSYSYQQGFMY------PSYGNAKSGSCGGY 172

HSP 2 Score: 63.1586 bits (152), Expect = 2.615e-10
Identity = 29/80 (36.25%), Postives = 47/80 (58.75%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            D +  K++V  + ++  S+ +  +F  +GEI E  +  DK TG+ KGY    ++ PE A+ A +DPA  I+GR+  C LA
Sbjct:   28 DTTYTKVFVGGLAWETQSETMRRYFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESARRACLDPAPIIDGRRANCNLA 107
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01037134001 (assembled CDS)

HSP 1 Score: 82.0333 bits (201), Expect = 5.441e-16
Identity = 37/73 (50.68%), Postives = 51/73 (69.86%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGR 420
            D +  K+F+ GL W+T  E ++  F  +GE+ EA+VI DKTTG+SKGYGFVTFR  D+A+ A  + +  IDGR
Sbjct:   12 DTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTFREPDAAMRACVDAAPVIDGR 84

HSP 2 Score: 57.7658 bits (138), Expect = 1.099e-8
Identity = 27/80 (33.75%), Postives = 44/80 (55.00%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            D +  K++V  + ++   + +  +F  +GEI E  +  DK TG+ KGY    ++ P+ A  A VD A  I+GR+  C LA
Sbjct:   12 DTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYGFVTFREPDAAMRACVDAAPVIDGRRANCNLA 91
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01016872001 (assembled CDS)

HSP 1 Score: 82.0333 bits (201), Expect = 5.441e-16
Identity = 50/161 (31.06%), Postives = 79/161 (49.07%), Query Frame = 1 
Query:  217 KLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIE 699
            KLF+ G+ W+T+ E   + FS YGE+ ++++++D+ TG+ +G+GF+TF     A   L+E    IDGR    +                     RKI+V  +P  +  D+L  +F+ YG I E  +  D  TG+ +G+  FV    E A   L    K  E
Sbjct:   52 KLFVGGISWETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEE-DHVIDGRAVEVKKTVPREGMEVRGVS-----KTRKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFG-FVTFVSEDAVERLFSEGKTHE 205

HSP 2 Score: 51.6026 bits (122), Expect = 7.875e-7
Identity = 23/54 (42.59%), Postives = 36/54 (66.67%), Query Frame = 1 
Query:  214 RKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDS 375
            RK+F+ G+    T + L+  FS+YG + E  ++LD  TG+S+G+GFVTF   D+
Sbjct:  140 RKIFVGGIPSSLTEDELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDA 193
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01009045001 (assembled CDS)

HSP 1 Score: 81.6481 bits (200), Expect = 7.106e-16
Identity = 38/73 (52.05%), Postives = 51/73 (69.86%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGR 420
            D +  K+F+ GL W+T T+ +R  F  +GE+ EA++I DK TGKSKGYGFVTFR  +SA  A  +P+  IDGR
Sbjct:   12 DTTFTKVFVGGLAWETPTDVMRRHFEQFGEILEAVIITDKNTGKSKGYGFVTFRDPESARRACVDPNPVIDGR 84

HSP 2 Score: 68.5514 bits (166), Expect = 6.225e-12
Identity = 31/80 (38.75%), Postives = 47/80 (58.75%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            D +  K++V  + ++ P+D +  HF  +GEI E  +  DK TGK KGY    ++ PE A+ A VDP   I+GR+  C +A
Sbjct:   12 DTTFTKVFVGGLAWETPTDVMRRHFEQFGEILEAVIITDKNTGKSKGYGFVTFRDPESARRACVDPNPVIDGRRANCNIA 91
[Close]
BLAST of MDP0000596919 vs. Vitis vinifera
Match: GSVIVT01030040001 (assembled CDS)

HSP 1 Score: 81.2629 bits (199), Expect = 9.281e-16
Identity = 49/177 (27.68%), Postives = 81/177 (45.76%), Query Frame = 1 
Query:  217 KLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            KLFI G+ WDT  + L+  FS YGE+ EA+++ D+TTG+++G+GFV F     A   +KE    IDGRM   +                           RKI+V  +   +       +F  +G I +  + +D  T + +G+    Y++ E     L+     + G+ +  K A+
Sbjct:    7 KLFIGGISWDTNEDRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVFADPAVAERVIKE-KHNIDGRMVEAKKAVPKDDQSILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFHELNGKMVEVKRAV 182
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: HNRPD_MOUSE (Heterogeneous nuclear ribonucleoprotein D0 OS=Mus musculus GN=Hnrnpd PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 4.696e-16
Identity = 48/167 (28.74%), Postives = 83/167 (49.70%), Query Frame = 1 
Query:  205 ASQR---KLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNI 696
            A+QR   K+FI GL WDTT + L+  FS +GE+ +  + LD  TG+S+G+GFV F+  +S    + +   K++G++                        ++KI+V  +  D P +K+  +F  +GE+E   L  D +T K +G+    +K  E  +  +     N+
Sbjct:   91 AAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKV----------IDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNV 247
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 6.133e-16
Identity = 48/170 (28.24%), Postives = 83/170 (48.82%), Query Frame = 1 
Query:  217 KLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            K+FI GL W T+ E LR  F  YG++ EA+V+ D TT +S+G+GFVTF   +S    L + + ++DG+    ++                    +KI+V  +      + + ++F  +G IE+  L FDKQT + +G+    +++ +            I  + + CK A
Sbjct:   30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMV------TRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKA 193
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: HNRPD_HUMAN (Heterogeneous nuclear ribonucleoprotein D0 OS=Homo sapiens GN=HNRNPD PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.133e-16
Identity = 45/160 (28.12%), Postives = 79/160 (49.38%), Query Frame = 1 
Query:  217 KLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNI 696
            K+FI GL WDTT + L+  FS +GE+ +  + LD  TG+S+G+GFV F+  +S    + +   K++G++                        ++KI+V  +  D P +K+  +F  +GE+E   L  D +T K +G+    +K  E  +  +     N+
Sbjct:   98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKV----------IDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNV 247
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: ROA1_RAT (Heterogeneous nuclear ribonucleoprotein A1 OS=Rattus norvegicus GN=Hnrnpa1 PE=1 SV=3)

HSP 1 Score: 85.5001 bits (210), Expect = 8.009e-16
Identity = 52/174 (29.89%), Postives = 85/174 (48.85%), Query Frame = 1 
Query:  214 RKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDP-----AKNIEGRQLLCK 720
            RKLFI GL ++TT E LRS F  +G L + +V+ D  T +S+G+GFVT+  V+    A+     K+DGR+    +                 ++++KI+V  +  D     L  +F  YG+IE   +  D+ +GK +G+A   +   +     ++         N E R+ LCK
Sbjct:   14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRV----VEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALCK 183
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: HNRPD_RAT (Heterogeneous nuclear ribonucleoprotein D0 OS=Rattus norvegicus GN=Hnrnpd PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.046e-15
Identity = 48/180 (26.67%), Postives = 85/180 (47.22%), Query Frame = 1 
Query:  157 RHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNI 696
            RH +   A R        + K+FI GL WDTT + L+  FS +G++ +  + LD  TG+S+G+GFV F+  +S    + +   K++G++                        ++KI+V  +  D P +K+  +F  +GE+E   L  D +T K +G+    +K  E  +  +     N+
Sbjct:   83 RHTEAATAQRE-------EWKMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKVMDQKEHKLNGKV----------IDPKRAKAMKTKEPVKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKYHNV 245
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: RA1L2_HUMAN (Heterogeneous nuclear ribonucleoprotein A1-like 2 OS=Homo sapiens GN=HNRNPA1L2 PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 2.330e-15
Identity = 48/172 (27.91%), Postives = 84/172 (48.84%), Query Frame = 1 
Query:  214 RKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            RKLFI GL ++TT E LRS F  +G L + +V+ D  T +S+G+GFVT+  V+    A+     K+DGR+    +                 ++++KI+V  +  D     L  +F  YG+IE   +  D+ +GK +G+A   +   +     ++     ++G     + A+
Sbjct:   14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNTTPHKVDGRV----VEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVKGHNCEVRKAL 181
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: ROA0_MOUSE (Heterogeneous nuclear ribonucleoprotein A0 OS=Mus musculus GN=Hnrnpa0 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.044e-15
Identity = 47/171 (27.49%), Postives = 86/171 (50.29%), Query Frame = 1 
Query:  217 KLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            KLFI GL   T+  GLR  F A+G L + +V+++  T +S+ +GFVT+ +V+ A  A+      +DG      +                   ++K++V  +  D+    L+ HF+ +G +E+  +  DKQ+GK +G+    +++ + A  A V     I+G ++  K A+
Sbjct:    8 KLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEADAAMAASPHAVDG----NTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAV 174
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: YHKF_SCHPO (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC660.15 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.975e-15
Identity = 46/170 (27.06%), Postives = 79/170 (46.47%), Query Frame = 1 
Query:  217 KLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            K+FI GL W+TT + LR  F  +GE+ +  V+ D TTG+S+G+GF+TF++    +  +      +DG++                          K++V  VP D   ++    F  +G + +  L  DK TG+ +G+    Y+     +A +  P   I G+ +  K A
Sbjct:  164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKN-PKCVNEVMSKEHHLDGKI----------IDPKRAIPREEQEKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRA 322
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: ROA1_PANTR (Heterogeneous nuclear ribonucleoprotein A1 OS=Pan troglodytes GN=HNRNPA1 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.975e-15
Identity = 48/172 (27.91%), Postives = 83/172 (48.26%), Query Frame = 1 
Query:  214 RKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            RKLFI GL ++TT E LRS F  +G L + +V+ D  T +S+G+GFVT+  V+    A+     K+DGR+    +                 ++++KI+V  +  D     L  +F  YG+IE   +  D+ +GK +G+A   +   +     ++     + G     + A+
Sbjct:   14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRV----VEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL 181
[Close]
BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Match: ROA1_MOUSE (Heterogeneous nuclear ribonucleoprotein A1 OS=Mus musculus GN=Hnrnpa1 PE=1 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 3.975e-15
Identity = 48/172 (27.91%), Postives = 83/172 (48.26%), Query Frame = 1 
Query:  214 RKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            RKLFI GL ++TT E LRS F  +G L + +V+ D  T +S+G+GFVT+  V+    A+     K+DGR+    +                 ++++KI+V  +  D     L  +F  YG+IE   +  D+ +GK +G+A   +   +     ++     + G     + A+
Sbjct:   14 RKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRV----VEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKAL 181
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: A5ADJ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g01570 PE=4 SV=1)

HSP 1 Score: 356.681 bits (914), Expect = 5.606e-96
Identity = 186/272 (68.38%), Postives = 210/272 (77.21%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAIXXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD+TKKRK+DENG+V  TD  S  KL+PEDAR++IE F  DQLL+ILQ+A  RH+DVLDA+RSIAD D +QRKLFIRGLGWDTTTEGLR LFSAYGELEEA+VILDK T KSKGYGFVTF+HVD AL+ALKEPSKKIDGRMTVTQL                DVS+RKIYVANVP DMP+D+LLAHF+ YGEIEEGPLGFDKQTGK +G+ALFVYKT E AQAALVDP K I+GRQL+CKLAI                      HGDG+G+
Sbjct:    1 MDATKKRKMDENGLV-STDGDSLTKLAPEDARKIIEPFGHDQLLEILQNAAVRHLDVLDAIRSIADRDLTQRKLFIRGLGWDTTTEGLRQLFSAYGELEEAVVILDKVTAKSKGYGFVTFKHVDGALLALKEPSKKIDGRMTVTQL-AASGLSGPASNASAVDVSMRKIYVANVPVDMPADRLLAHFSSYGEIEEGPLGFDKQTGKSRGFALFVYKTAEAAQAALVDPTKMIDGRQLVCKLAIEGKKGKTGGPAQAPTGVPGEAGHGDGLGV 270

HSP 2 Score: 65.4698 bits (158), Expect = 2.581e-8
Identity = 29/44 (65.91%), Postives = 34/44 (77.27%), Query Frame = 1 
Query: 1174 YPEGGHYGLS---AYQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YP+ GHY LS   AY +Q HQ AGTSP+PRVP GGMYP+ PPY+
Sbjct:  406 YPDSGHYSLSSSSAYPSQIHQPAGTSPVPRVPPGGMYPSGPPYY 449
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: I1KDM3_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 7.322e-96
Identity = 185/273 (67.77%), Postives = 212/273 (77.66%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI--XXXXXXXXXXXXXXXXXXXXNAHGDGMG 813
            MD TKKRKLDENG   + D S   KLSP + R+LIERFT DQLLDILQDA++RH+DVL AVR++ADPD SQRKLFIRGLGWDTTT+GLRSLFS +G+LEEA+VILDK TGKSKGYGFVTFRHVD AL+AL+EPSK+IDGR+TVTQL                DV+LRKIYVANVP D+P+DKLLAHF++YGEIEEGPLGFDKQTGK KG+ALFVYK+PEGAQAAL+DP K +EGRQL CKLAI                      + HGDG+G
Sbjct:    1 MDPTKKRKLDENGFN-NNDSSDPLKLSPSEVRKLIERFTSDQLLDILQDAVARHLDVLAAVRAVADPDVSQRKLFIRGLGWDTTTDGLRSLFSTFGDLEEAVVILDKATGKSKGYGFVTFRHVDGALLALREPSKRIDGRVTVTQL---AAAGNSASNVNPADVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAQAALIDPVKTVEGRQLSCKLAITDGKQGKRVGPDSAQAHHGNVQHGHGDGVG 269

HSP 2 Score: 74.3294 bits (181), Expect = 5.557e-11
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA---YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YP+ GHYGLSA   YQNQHH  +GTSP+PRVP G MYPN+PPY+
Sbjct:  401 YPDSGHYGLSASSGYQNQHHPPSGTSPMPRVPPGSMYPNMPPYY 444
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: B9GGV7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_176403 PE=4 SV=1)

HSP 1 Score: 353.214 bits (905), Expect = 6.198e-95
Identity = 180/249 (72.29%), Postives = 206/249 (82.73%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAP-KLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL-----XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            MD TKKRKL+ENG+V  T    +P KL+P+DAR+++ERFTPDQLLDILQ+A+ RH D+L+AVRSIADPDA+QRKLFIRGLGW+TTTE LR+LFS YGELEEA+VILDK TGKSKGYGFV ++HVD AL+ALKEPSKKIDGR+TVTQL                     DV++RKIYVANVPY+MPSDKLL HFA YGEIEEGPLGFDKQTGK KG+ALFVYKT EGAQAAL++P K IEGRQL CKLAI
Sbjct:    1 MDPTKKRKLEENGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDILEAVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVIYKHVDGALLALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANVPYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEGRQLNCKLAI 249
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: I1LSV2_SOYBN (Uncharacterized protein OS=Glycine max GN=Gma.47617 PE=4 SV=1)

HSP 1 Score: 352.443 bits (903), Expect = 1.057e-94
Identity = 177/240 (73.75%), Postives = 202/240 (84.17%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCK 720
            MD TKKRKLDENG + + D S   KLSP DAR+LIERFT DQLLDILQD ++RH DVL AVR+++DPD SQRKLFIRGLGWDTTT+GLRSLFS YG+LEEA+VILDK TGKSKGYGFVTFRHVD AL+AL+EPSK+IDGR+TVTQL                DV+LRKIYVANVP D+P+DKLLAHF++YGEIEEGPLGFDKQTGK KG+ALFVYK+PEGA+AAL+DP K +EGRQL CK
Sbjct:    1 MDPTKKRKLDENGFI-NNDSSEPLKLSPSDARKLIERFTTDQLLDILQDTVARHPDVLAAVRAVSDPDVSQRKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYGFVTFRHVDGALLALREPSKRIDGRVTVTQL---AAAGNSALNANAVDVALRKIYVANVPPDLPADKLLAHFSVYGEIEEGPLGFDKQTGKSKGFALFVYKSPEGAKAALIDPMKTVEGRQLSCK 236

HSP 2 Score: 67.0106 bits (162), Expect = 8.872e-9
Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            DVS RK+++  + +D  +D L + F+ YG++EE  +  DK TGK KGY    ++  +GA  AL +P+K I+GR  + +LA
Sbjct:   67 DVSQRKLFIRGLGWDTTTDGLRSLFSTYGDLEEAVVILDKATGKSKGYGFVTFRHVDGALLALREPSKRIDGRVTVTQLA 146
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: Q9LKA4_ARATH (AT3G15010 protein OS=Arabidopsis thaliana GN=At3g15010 PE=2 SV=1)

HSP 1 Score: 327.791 bits (839), Expect = 2.789e-87
Identity = 174/276 (63.04%), Postives = 203/276 (73.55%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSA---PKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI-XXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD  KKRKLDENG  L+T+        +LSP+DAR++IERFT DQLLD+LQ+A+ RH DVL++VR  AD D SQRKLFIRGL  DTTTEGLRSLFS+YG+LEEAIVILDK TGKSKGYGFVTF HVD AL+ALKEPSKKIDGR+TVTQL                D+S+RKIYVANVP+DMP+D+LL HF  YG++EEGPLGFDK TGK +G+ALFVYKT EGAQAAL DP K I+G+ L CKLA+                     + HG+GMGM
Sbjct:    1 MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQL---AASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGM 273

HSP 2 Score: 68.9366 bits (167), Expect = 2.335e-9
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA---YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YPE GHYGLS+   Y  QHHQ  GTSP+PRVP GGMYPN PP +
Sbjct:  361 YPESGHYGLSSSAGYPGQHHQAVGTSPVPRVPHGGMYPNGPPNY 404
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: H9AWW7_ELAGV (RBP42 OS=Elaeis guineensis var. tenera PE=4 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 3.083e-86
Identity = 168/244 (68.85%), Postives = 196/244 (80.33%), Query Frame = 1 
Query:    1 MDST-KKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            MD T KKRK DENG V+    +S   L+PEDAR+++E FT + LLDI+++A+ R   VLDAVR+IAD D +QRKLFIRGLGW+TTTE LR+LFS+YGELEEA+VI+DK TGKSKGYGF+TFRH+D AL+ALKEPSKKIDGRMTVTQL                DVSLRKIYV NVP DMPSD+LLAHF+ YGEIEEGPLGFDKQTGK +G+ALFVYKT EGA A+LVDP KNI+G  L+CKLAI
Sbjct:    1 MDPTSKKRKSDENGAVV----ASPALLTPEDARKIVEPFTREHLLDIVREAMCRDAGVLDAVRAIADRDPAQRKLFIRGLGWETTTESLRNLFSSYGELEEAVVIVDKATGKSKGYGFITFRHIDGALLALKEPSKKIDGRMTVTQL---AAAGTTAAAPPAIDVSLRKIYVGNVPADMPSDRLLAHFSSYGEIEEGPLGFDKQTGKFRGFALFVYKTAEGAGASLVDPTKNIDGHHLVCKLAI 237
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: D7L3Y0_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_478927 PE=4 SV=1)

HSP 1 Score: 320.857 bits (821), Expect = 3.409e-85
Identity = 173/277 (62.45%), Postives = 199/277 (71.84%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSA---PKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI--XXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD  KKRKLDENG  L T+        +L+P+DAR++IERFT DQLLD+LQ+A+ RH DVLD+VRS AD D SQRKLFIRGL  DTTTEGL SLFS YG+LEEAIVILDK TGKSKGYGFVTF HVD AL+ALKEPSKKIDGR+TVTQL                D+S+RKIYVANVP+DMP+D+LL HF  YG++EEGPLGFDK TGK +G+ALFVYKT EGAQ AL DP K I+G+ L CKLA+                      + HGD MGM
Sbjct:    1 MDMMKKRKLDENGGGLITNGGGIIGPTRLTPQDARKIIERFTTDQLLDLLQEAIVRHPDVLDSVRSTADSDISQRKLFIRGLAADTTTEGLLSLFSNYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQL---AASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQTALADPVKVIDGKHLNCKLAVDGKKGGGKPGMPQAQDGGSGHGHVHGDVMGM 274

HSP 2 Score: 68.9366 bits (167), Expect = 2.335e-9
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA---YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YPE GHYGLS+   Y  QHHQ  GTSP+PRVP GGMYPN PP +
Sbjct:  361 YPESGHYGLSSSTGYPGQHHQAVGTSPVPRVPHGGMYPNGPPNY 404
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: D7KKF6_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_892356 PE=4 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.886e-84
Identity = 170/275 (61.82%), Postives = 200/275 (72.73%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDP---SSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAIXXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD  KKRKLDENG+ +  D    S + +L P+DAR++IERF+ DQLLDILQ+A+ RH DVL+ VR  AD D SQRKLFIRGL  +TTTEGLRSLFS YG+L+EAIVILDK T KSKGYGFVTF+HVD AL+ALKEPSKKIDGR+TVTQL                D+S+RKIYVANVP+DMP+D+LL  F  YG+IEEGPLGFDK TGK +G+ALFVYKT EGAQAAL +P K ++G+ L CKLAI                    + HGDGMGM
Sbjct:    1 MDMLKKRKLDENGIGMLNDGINGSVSSRLMPQDARKIIERFSTDQLLDILQEAVVRHTDVLEIVRLTADSDISQRKLFIRGLAAETTTEGLRSLFSNYGDLDEAIVILDKVTAKSKGYGFVTFKHVDGALLALKEPSKKIDGRVTVTQL--AAAGNQGTTNSHVSDISMRKIYVANVPFDMPADRLLNQFLAYGDIEEGPLGFDKITGKSRGFALFVYKTAEGAQAALAEPMKVVDGKNLQCKLAI-DGKKGKPPGQDGGAGVGHGHGHGDGMGM 272
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: B9S994_RICCO (Heterogeneous nuclear ribonucleoprotein A1, putative OS=Ricinus communis GN=RCOM_1014680 PE=4 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 2.140e-79
Identity = 154/247 (62.35%), Postives = 187/247 (75.71%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPK---LSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL-XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            MD TKKRK DENG    T  SS P    LSP+D R++IE FT +QLL+ILQ+A +RH DVL++VR++AD D S RKLFIRGL  +TTTE +R+LF+ YGELEEAIVI DK TGKSKG+GF+TF+HVD AL+ALKEPSKKIDGRMTVTQL                 DVS RKIYV NVPY++PS++LL  F  YGE+EEGPLGFDK TGK KG+A  +YKT EGA+AA+ DP K I+G Q++CK+A+
Sbjct:    1 MDFTKKRKADENGTTTITTTSSPPPTTTLSPQDIRKIIEPFTKEQLLEILQNAATRHADVLESVRTLADSDISLRKLFIRGLSSETTTETIRNLFNNYGELEEAIVIFDKNTGKSKGFGFITFKHVDGALIALKEPSKKIDGRMTVTQLASAGLSNSSINSSGGGSDVSARKIYVGNVPYNIPSERLLGFFLNYGEVEEGPLGFDKSTGKSKGFAFIIYKTEEGAKAAIADPVKMIDGHQVVCKMAV 247
[Close]
BLAST of MDP0000596919 vs. ExPASy TrEMBL
Match: C5XR08_SORBI (Putative uncharacterized protein Sb03g027820 OS=Sorghum bicolor GN=Sb03g027820 PE=4 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 4.934e-76
Identity = 154/248 (62.10%), Postives = 182/248 (73.39%), Query Frame = 1 
Query:   10 TKKRKLDENGVVLDTDPSSAPKL--SPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            +KKRK DENG V  +    A  L  + +D  RL+E  + DQL DI   A       LDAVR+ AD D + RKLF+RGLGW+TT++ LR++FSAYG+LEEA+VI DKTTG+SKGYGFVTFRH DSA++ALKEPSKKIDGRMTVTQL                      DV+LRKI+V NVP DMPS++LLAHFA YGEIEEGPLGFDKQTGK +G+ALFVYKTPEGAQA+LVD  K I+G QL+CKLAI
Sbjct:    5 SKKRKPDENGAVTASPAGGAATLGLTRDDVLRLLEPLSRDQLADIAAAAALVSAHALDAVRAAADRDPALRKLFVRGLGWETTSDSLRAIFSAYGDLEEAVVITDKTTGRSKGYGFVTFRHADSAVLALKEPSKKIDGRMTVTQLAAAGSAGGPSGGAAGSGGAPVADVALRKIFVGNVPADMPSERLLAHFASYGEIEEGPLGFDKQTGKFRGFALFVYKTPEGAQASLVDTVKVIDGHQLVCKLAI 252
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT3G15010.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:5052844-5054058 FORWARD LENGTH=404)

HSP 1 Score: 327.791 bits (839), Expect = 8.402e-90
Identity = 174/276 (63.04%), Postives = 203/276 (73.55%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSA---PKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI-XXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD  KKRKLDENG  L+T+        +LSP+DAR++IERFT DQLLD+LQ+A+ RH DVL++VR  AD D SQRKLFIRGL  DTTTEGLRSLFS+YG+LEEAIVILDK TGKSKGYGFVTF HVD AL+ALKEPSKKIDGR+TVTQL                D+S+RKIYVANVP+DMP+D+LL HF  YG++EEGPLGFDK TGK +G+ALFVYKT EGAQAAL DP K I+G+ L CKLA+                     + HG+GMGM
Sbjct:    1 MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQL---AASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGM 273

HSP 2 Score: 68.9366 bits (167), Expect = 7.035e-12
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA---YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YPE GHYGLS+   Y  QHHQ  GTSP+PRVP GGMYPN PP +
Sbjct:  361 YPESGHYGLSSSAGYPGQHHQAVGTSPVPRVPHGGMYPNGPPNY 404
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT3G15010.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr3:5052844-5054058 FORWARD LENGTH=404)

HSP 1 Score: 327.791 bits (839), Expect = 8.402e-90
Identity = 174/276 (63.04%), Postives = 203/276 (73.55%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSA---PKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI-XXXXXXXXXXXXXXXXXXXXNAHGDGMGM 816
            MD  KKRKLDENG  L+T+        +LSP+DAR++IERFT DQLLD+LQ+A+ RH DVL++VR  AD D SQRKLFIRGL  DTTTEGLRSLFS+YG+LEEAIVILDK TGKSKGYGFVTF HVD AL+ALKEPSKKIDGR+TVTQL                D+S+RKIYVANVP+DMP+D+LL HF  YG++EEGPLGFDK TGK +G+ALFVYKT EGAQAAL DP K I+G+ L CKLA+                     + HG+GMGM
Sbjct:    1 MDMMKKRKLDENGNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTADSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLALKEPSKKIDGRVTVTQL---AASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPLGFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPGMPQAQDGGSGHGHVHGEGMGM 273

HSP 2 Score: 68.9366 bits (167), Expect = 7.035e-12
Identity = 30/44 (68.18%), Postives = 33/44 (75.00%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA---YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YPE GHYGLS+   Y  QHHQ  GTSP+PRVP GGMYPN PP +
Sbjct:  361 YPESGHYGLSSSAGYPGQHHQAVGTSPVPRVPHGGMYPNGPPNY 404
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT3G56860.5 (| Symbols: UBA2A | UBP1-associated protein 2A | chr3:21050708-21052144 REVERSE LENGTH=478)

HSP 1 Score: 186.808 bits (473), Expect = 2.315e-47
Identity = 98/225 (43.56%), Postives = 134/225 (59.56%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL----------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            E  + L+E F+ +Q+L +L++A  +HVDV + +R +AD D   RK+F+ GLGWDT TE L   F  YGE+E+   + DK +GKSKGYGF+ ++    A  ALK+P KKI  RMT  QL                          + + +KIYV+NV  ++   KLL  F+ +GEIEEGPLG DK TG+ KG+ LFVYK+ E A+ AL +P K  EG  L C+ AI
Sbjct:   97 EPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAI 321
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT3G56860.4 (| Symbols: UBA2A | UBP1-associated protein 2A | chr3:21050708-21052144 REVERSE LENGTH=478)

HSP 1 Score: 186.808 bits (473), Expect = 2.315e-47
Identity = 98/225 (43.56%), Postives = 134/225 (59.56%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL----------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            E  + L+E F+ +Q+L +L++A  +HVDV + +R +AD D   RK+F+ GLGWDT TE L   F  YGE+E+   + DK +GKSKGYGF+ ++    A  ALK+P KKI  RMT  QL                          + + +KIYV+NV  ++   KLL  F+ +GEIEEGPLG DK TG+ KG+ LFVYK+ E A+ AL +P K  EG  L C+ AI
Sbjct:   97 EPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAI 321
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT3G56860.2 (| Symbols: UBA2A | UBP1-associated protein 2A | chr3:21050708-21052144 REVERSE LENGTH=478)

HSP 1 Score: 186.808 bits (473), Expect = 2.315e-47
Identity = 98/225 (43.56%), Postives = 134/225 (59.56%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL----------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            E  + L+E F+ +Q+L +L++A  +HVDV + +R +AD D   RK+F+ GLGWDT TE L   F  YGE+E+   + DK +GKSKGYGF+ ++    A  ALK+P KKI  RMT  QL                          + + +KIYV+NV  ++   KLL  F+ +GEIEEGPLG DK TG+ KG+ LFVYK+ E A+ AL +P K  EG  L C+ AI
Sbjct:   97 EPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAI 321
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT3G56860.1 (| Symbols: UBA2A | UBP1-associated protein 2A | chr3:21050708-21052144 REVERSE LENGTH=478)

HSP 1 Score: 186.808 bits (473), Expect = 2.315e-47
Identity = 98/225 (43.56%), Postives = 134/225 (59.56%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL----------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            E  + L+E F+ +Q+L +L++A  +HVDV + +R +AD D   RK+F+ GLGWDT TE L   F  YGE+E+   + DK +GKSKGYGF+ ++    A  ALK+P KKI  RMT  QL                          + + +KIYV+NV  ++   KLL  F+ +GEIEEGPLG DK TG+ KG+ LFVYK+ E A+ AL +P K  EG  L C+ AI
Sbjct:   97 EPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAI 321
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT3G56860.3 (| Symbols: UBA2A | UBP1-associated protein 2A | chr3:21050708-21052144 REVERSE LENGTH=478)

HSP 1 Score: 186.808 bits (473), Expect = 2.315e-47
Identity = 98/225 (43.56%), Postives = 134/225 (59.56%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL----------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            E  + L+E F+ +Q+L +L++A  +HVDV + +R +AD D   RK+F+ GLGWDT TE L   F  YGE+E+   + DK +GKSKGYGF+ ++    A  ALK+P KKI  RMT  QL                          + + +KIYV+NV  ++   KLL  F+ +GEIEEGPLG DK TG+ KG+ LFVYK+ E A+ AL +P K  EG  L C+ AI
Sbjct:   97 EPIQDLLEPFSKEQVLSLLKEAAEKHVDVANRIREVADEDPVHRKIFVHGLGWDTKTETLIEAFKQYGEIEDCKAVFDKISGKSKGYGFILYKSRSGARNALKQPQKKIGSRMTACQLASKGPVFGGAPIAAAAVSAPAQHSNSEHTQKKIYVSNVGAELDPQKLLMFFSKFGEIEEGPLGLDKYTGRPKGFCLFVYKSSESAKRALEEPHKTFEGHILHCQKAI 321
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT2G41060.2 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:17127138-17128493 FORWARD LENGTH=451)

HSP 1 Score: 184.882 bits (468), Expect = 8.796e-47
Identity = 99/218 (45.41%), Postives = 130/218 (59.63%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVS----LRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            E    L+E F+ DQLL +L++A  RH DV + +R +AD D   RK+F+ GLGWDT  + L   F  YGE+E+   ++DK +G+SKGYGF+ F+    A  ALK+P KKI  RMT  QL                  +     RKIYV+NV  D+   KLL  F+ +GEIEEGPLG DK TG+ KG+ALFVY++ E A+ AL +P K  EG  L C  A
Sbjct:   85 EPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKA 302
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT2G41060.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:17127138-17128493 FORWARD LENGTH=451)

HSP 1 Score: 184.882 bits (468), Expect = 8.796e-47
Identity = 99/218 (45.41%), Postives = 130/218 (59.63%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVS----LRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            E    L+E F+ DQLL +L++A  RH DV + +R +AD D   RK+F+ GLGWDT  + L   F  YGE+E+   ++DK +G+SKGYGF+ F+    A  ALK+P KKI  RMT  QL                  +     RKIYV+NV  D+   KLL  F+ +GEIEEGPLG DK TG+ KG+ALFVY++ E A+ AL +P K  EG  L C  A
Sbjct:   85 EPIEDLLEPFSKDQLLILLKEAAERHRDVANRIRIVADEDLVHRKIFVHGLGWDTKADSLIDAFKQYGEIEDCKCVVDKVSGQSKGYGFILFKSRSGARNALKQPQKKIGTRMTACQLASIGPVQGNPVVAPAQHFNPENVQRKIYVSNVSADIDPQKLLEFFSRFGEIEEGPLGLDKATGRPKGFALFVYRSLESAKKALEEPHKTFEGHVLHCHKA 302
[Close]
BLAST of MDP0000596919 vs. TAIR10
Match: AT2G22100.1 (| Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:9392397-9393545 REVERSE LENGTH=382)

HSP 1 Score: 111.694 bits (278), Expect = 9.464e-25
Identity = 54/145 (37.24%), Postives = 87/145 (60.00%), Query Frame = 1 
Query:   16 KRKLDENGVVLDTDPSSAP----------KLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGR 420
            KR  DE+  ++D+ P + P          +   ED + L+E ++ ++L++++     +   ++ AV   AD D+SQR +F+RGLGWDTT E L++ F  YGE+ E  V++DK TG++KG+GFV F+    A  ALK P K++  R
Sbjct:   87 KRSSDESEEIVDSKPVTVPIVTIESDSDFEFDKEDIKNLLESYSKEELINLIYKTAEKGSKLISAVFESADRDSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARAALKNPEKRMYNR 231

HSP 2 Score: 62.7734 bits (151), Expect = 5.041e-10
Identity = 31/77 (40.26%), Postives = 46/77 (59.74%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLC 717
            D S R I+V  + +D   + L A F +YGEI E  +  DK TG+ KG+   ++KT +GA+AAL +P K +  R + C
Sbjct:  159 DSSQRNIFVRGLGWDTTHENLKAAFEVYGEITECSVVMDKDTGRAKGFGFVLFKTRKGARAALKNPEKRMYNRTVSC 235
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0001s38640.1 ()

HSP 1 Score: 353.214 bits (905), Expect = 2.127e-97
Identity = 180/249 (72.29%), Postives = 206/249 (82.73%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAP-KLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL-----XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            MD TKKRKL+ENG+V  T    +P KL+P+DAR+++ERFTPDQLLDILQ+A+ RH D+L+AVRSIADPDA+QRKLFIRGLGW+TTTE LR+LFS YGELEEA+VILDK TGKSKGYGFV ++HVD AL+ALKEPSKKIDGR+TVTQL                     DV++RKIYVANVPY+MPSDKLL HFA YGEIEEGPLGFDKQTGK KG+ALFVYKT EGAQAAL++P K IEGRQL CKLAI
Sbjct:    3 MDPTKKRKLEENGIVSSTTDLDSPYKLTPQDARKMMERFTPDQLLDILQNAVVRHPDILEAVRSIADPDATQRKLFIRGLGWETTTENLRNLFSTYGELEEAVVILDKNTGKSKGYGFVIYKHVDGALLALKEPSKKIDGRVTVTQLAIAGNSGANNNNNSSANPGVVDVAMRKIYVANVPYEMPSDKLLNHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQAALLEPVKMIEGRQLNCKLAI 251

HSP 2 Score: 52.373 bits (124), Expect = 7.759e-7
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 1 
Query: 1174 YPEGGHYGLSA----YQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            YP+ G Y LS+    + +QH    G SP PRVP GGMYPN+PPY+
Sbjct:  335 YPDPGQYSLSSSNASFPSQHQ---GASPAPRVPSGGMYPNLPPYY 376
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0004s05450.1 ()

HSP 1 Score: 288.115 bits (736), Expect = 8.401e-78
Identity = 143/246 (58.13%), Postives = 188/246 (76.42%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTD---PSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            M+  KKRK +ENG+ + T    PS    L+PE+ R+++E FT DQLLDILQ A   H D+L++VRS+AD D S RKLFIRGL  +TT++ LR LFS++GELEEAIVI DK TGKSKG+GF+TF+HVDSA+++++EPSKKIDGR+TVTQL                DVSLRK+YV NVP+++ S++LL  F++YGEIEEGPLGFDK TGK KG+A  +YK+ +GA+AA+ DP KNI+G Q++CKLA+
Sbjct:    1 MEFIKKRKAEENGISIPTGTSPPSPITPLTPEEIRKILEPFTKDQLLDILQSATLHHSDILNSVRSVADGDISLRKLFIRGLSSETTSDTLRILFSSFGELEEAIVIHDKNTGKSKGFGFITFKHVDSAMLSIREPSKKIDGRITVTQL--------ASNNSSTGDVSLRKVYVGNVPFEITSERLLGFFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKSEDGAKAAIADPMKNIDGHQVVCKLAV 238
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0011s07480.1 ()

HSP 1 Score: 285.034 bits (728), Expect = 7.112e-77
Identity = 148/245 (60.41%), Postives = 184/245 (75.10%), Query Frame = 1 
Query:    1 MDSTKKRKLDENG--VVLDTDPSSA-PKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            MD  KKRK DENG  +   T PSS    L+PE+ R++IE FT DQLLDILQ A   H DVL++VRS+AD D S RKLFIRGL  +TT+E LR LFS+ GELEEAIVI DK TGKSKG+GF+TF+HVD+A+++++EPSKKIDGR+TVTQL                DVSLRK+YV NVP+++ S++LL  F++YGEIEEGPLGFDK TGK KG+A  +YK  EGA+AA+ DP KNI+G Q++CK A
Sbjct:    1 MDFIKKRKADENGNSIPTGTTPSSPITPLTPEEIRKIIEPFTKDQLLDILQSATLHHSDVLNSVRSVADGDISLRKLFIRGLSSETTSETLRILFSSSGELEEAIVIHDKNTGKSKGFGFITFKHVDAAMLSIREPSKKIDGRITVTQL--------ASNNSSTTDVSLRKVYVGNVPFEVSSERLLGFFSMYGEIEEGPLGFDKSTGKSKGFAFLIYKNEEGAKAAIADPMKNIDGHQVVCKFA 237
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0016s02440.1 ()

HSP 1 Score: 200.675 bits (509), Expect = 1.764e-51
Identity = 104/227 (45.81%), Postives = 136/227 (59.91%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL------------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            E   +L+E F  DQL+++L++A   H DV + +R +AD D   RK+F+ GLGWDT  E L S F  YGE+E+   + DK +GKSKGYGF+ F+    A  ALKEP KKI  RMT  QL                            + +LRKIYV+NV  D+   KL ++F+ +GEIEEGPLG DK TGK KG+ LFVYK+ EGA+ AL +P K+ EG  L C+ AI
Sbjct:   90 EPVEKLLEPFGKDQLINLLREAADAHRDVAEKIRQVADQDPVHRKIFVHGLGWDTNAEALMSAFKPYGEIEDCKAVCDKVSGKSKGYGFILFKRRSGARKALKEPQKKIGNRMTACQLASIGPVPQSSGGQAGPVAAAAQAQQPVSEYTLRKIYVSNVAADLDPQKLYSYFSEFGEIEEGPLGLDKATGKPKGFCLFVYKSSEGAKKALEEPHKSFEGHMLHCQKAI 316

HSP 2 Score: 59.6918 bits (143), Expect = 4.860e-9
Identity = 40/133 (30.08%), Postives = 63/133 (47.37%), Query Frame = 1 
Query:   37 GVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDI--LQDALSRHVDVLDAVRSIADP--DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRM 423
            G +L    S A K   E  +++  R T  QL  I  +  +       + A      P  + + RK+++  +  D   + L S FS +GE+EE  + LDK TGK KG+    ++  + A  AL+EP K  +G M
Sbjct:  177 GFILFKRRSGARKALKEPQKKIGNRMTACQLASIGPVPQSSGGQAGPVAAAAQAQQPVSEYTLRKIYVSNVAADLDPQKLYSYFSEFGEIEEGPLGLDKATGKPKGFCLFVYKSSEGAKKALEEPHKSFEGHM 309
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0006s02650.1 ()

HSP 1 Score: 193.356 bits (490), Expect = 2.816e-49
Identity = 102/227 (44.93%), Postives = 134/227 (59.03%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL------------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            E   +L+E F  DQL+++L++A   H DV D +R +AD D   RK+F+ GLGWDT  E L + F  YGE+E+   + DK TGKSKGYGF+ F+    A  ALKEP KKI  RM   QL                            + +LRKIYV+NV  ++   KL++ F+ +GEIEEGPLG DK TGK KG+ LFVYKT E A+ AL +P K+ EG  L C+ A+
Sbjct:   87 EPIEKLLEPFGKDQLINLLREAADGHRDVADKIRQVADQDPVHRKIFVHGLGWDTNAEALINAFKPYGEIEDCKAVCDKVTGKSKGYGFILFKKRSGARNALKEPQKKIGNRMAACQLASTGPVPQSSAGPSGPIAAAAQTQQPVSEYTLRKIYVSNVGANLDPQKLMSFFSEFGEIEEGPLGLDKATGKPKGFCLFVYKTVESAKKALEEPHKSFEGHILHCQKAV 313
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0005s08340.1 ()

HSP 1 Score: 184.111 bits (466), Expect = 1.709e-46
Identity = 94/216 (43.52%), Postives = 133/216 (61.57%), Query Frame = 1 
Query:   82 PEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL-XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            P D   L+E +T DQL+D++ ++  ++  +   +   AD D + R +F+ G  WDTT + L S F+A+GE+EE  V++DK TGK+KGYGFV F+   +A+ ALKE  + ++ RM   QL                 +  +RKI+V+NV      +KL A F  +GEIE GP+GFDK+TGK +GYALFVYKT EGA  AL +P K  EG+QL C +A
Sbjct:   42 PADLSTLLEPYTKDQLIDLITNSAIKNPSLYSLIHQHADRDVTHRNVFVHGFSWDTTRQDLVSAFAAFGEIEECNVVIDKATGKAKGYGFVLFKSRKAAISALKETKRMVNDRMASCQLASVGSANAASAAKGKELEGGVRKIFVSNVGMSTDKEKLRAFFEKFGEIENGPIGFDKETGKSRGYALFVYKTVEGAIKALEEPHKIFEGQQLRCSVA 257
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0001s22780.1 ()

HSP 1 Score: 165.622 bits (418), Expect = 6.288e-41
Identity = 89/214 (41.59%), Postives = 125/214 (58.41%), Query Frame = 1 
Query:   85 EDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            E   ++++ FT + L+ IL++A S    +   + +  D D   RK+F+ GLGWD   E L S+F  YGE+EE  ++ DK TG+SKGYGF+ F+   +A  ALKEP KK+ G  TV+                  DVSLRK+Y+ NV   +  + L   FA +GEIE+GP GFDK T K +G+A  VYK+ EG + AL +P K  EG +L C L+
Sbjct:   86 ETISKILQPFTKELLIKILKEAASTDPCIATEIFNSVDSDPVHRKIFVHGLGWDAHNETLISVFKKYGEIEECKIVTDKATGRSKGYGFLLFKTRIAARKALKEPQKKV-GNRTVSCQLASLGKGQNQKQDNSSDVSLRKLYIGNVGPQISVENLREFFAQFGEIEDGPSGFDKSTMKFRGFAFIVYKSLEGIRKALEEPVKVFEGLKLQCSLS 298
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0006s20530.1 ()

HSP 1 Score: 127.487 bits (319), Expect = 1.898e-29
Identity = 83/232 (35.78%), Postives = 123/232 (53.02%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPKLSPED-ARRLIERFTPDQLLDILQD-ALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAK 690
            M+  KKRK+DE  +       SA  L+ +D  R L++  +  QL+D+L    L   + ++ A+       +S   +       DT  E     F  +GE+EE  VI DK TGKS+GYGF+T++H++SA  AL  PSK IDGRM V  L                D++ RK+Y+  +  ++ S+ LL  F  YGEIEEG + ++K T + +G+    YKT E A+ A+ DP K
Sbjct:    1 MEDLKKRKMDEAII-----NGSAETLTTQDYLRSLLDPLSKPQLVDLLSRLCLCGDISLVSAIGRFVSDSSSVCCVI------DTVHE-----FRMHGEIEEGSVIYDKATGKSRGYGFITYKHMESAQSALGAPSKLIDGRMAVCNL----ACEGLTGATTTPDLTQRKLYIGGLSPEISSEMLLHFFGRYGEIEEGSVAYNKDTNESRGFGFVTYKTVEAAKKAIDDPHK 212

HSP 2 Score: 67.3958 bits (163), Expect = 2.331e-11
Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  199 PDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTV 429
            PD +QRKL+I GL  + ++E L   F  YGE+EE  V  +K T +S+G+GFVT++ V++A  A+ +P K +  +  V
Sbjct:  144 PDLTQRKLYIGGLSPEISSEMLLHFFGRYGEIEEGSVAYNKDTNESRGFGFVTYKTVEAAKKAIDDPHKLLGDKFPV 220

HSP 3 Score: 62.003 bits (149), Expect = 9.792e-10
Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 1 
Query:  559 FALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            F ++GEIEEG + +DK TGK +GY    YK  E AQ+AL  P+K I+GR  +C LA
Sbjct:   78 FRMHGEIEEGSVIYDKATGKSRGYGFITYKHMESAQSALGAPSKLIDGRMAVCNLA 133
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0014s18470.1 ()

HSP 1 Score: 90.5077 bits (223), Expect = 2.571e-18
Identity = 52/176 (29.55%), Postives = 85/176 (48.30%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            D+ + KLFI G+ WDTT E LR  F+ YGE+ + +++ DKTTG+ +G+GFV F    S L  + +    IDGR  +T                  +    KI+V  +P  +  D    +F  YG + +  L +D+QT + +G+    + T +     L      + G+ +  K A+
Sbjct:    2 DSDEGKLFIGGIAWDTTEETLRDHFNLYGEVSQVVIMRDKTTGRPRGFGFVVFSD-PSLLDPVLQDKHTIDGRSVMT----LSPFSSNSSNFLFCNFRTNKIFVGGLPPTLMEDAFRQYFQSYGHVCDVVLMYDQQTQRPRGFGFITFDTEDAVDNVLQKTFHELNGKLVEVKRAL 172
[Close]
BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Match: POPTR_0002s26030.1 ()

HSP 1 Score: 87.0409 bits (214), Expect = 2.842e-17
Identity = 47/176 (26.70%), Postives = 84/176 (47.73%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            D+ + KLF+ G+ WDTT + LR  F+ YGE+ + +++ DKTTG+ +G+GFV F    S L  +      IDGR  +                    +  +KI+V  +P  +  D    +F  YG + +  + +D+QT + +G+    + + +     L      + G+ +  K A+
Sbjct:    2 DSDEGKLFVGGIAWDTTEDTLRDHFNQYGEVSQVVIMRDKTTGRPRGFGFVVFSD-PSVLDPVLHDKHTIDGRTVI--------ILPLSLLWGLSCIGTKKIFVGGLPSTVTEDGFRQYFQSYGHVNDVVVMYDQQTQRPRGFGFITFDSEDAVDNVLQKTFHELNGKLVEVKRAL 168
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa005857m ()

HSP 1 Score: 426.787 bits (1096), Expect = 1.061e-119
Identity = 217/273 (79.49%), Postives = 228/273 (83.52%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAIXXXXXXXXXXXXXXXXXXXXNAHGDGMGMA 819
            MD +KKRKLDENGVVLDTDPSS PKLSPEDAR+LIERF PDQL+DILQDA++RHVDVLDAVRSIAD DASQRKLFIRGLGWDTTTEGLR+LFSAYGELEEAIVILDK TGKS+GYGFVTFRHVD AL+ALKEPSKKIDGRMTVTQL                DVSLRKIYVANVPYDMP+DKLLAHF+ YGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDP KNIEGRQL CKLAI                    NAHGDGMG+A
Sbjct:    1 MDPSKKRKLDENGVVLDTDPSSIPKLSPEDARKLIERFNPDQLIDILQDAVTRHVDVLDAVRSIADLDASQRKLFIRGLGWDTTTEGLRALFSAYGELEEAIVILDKVTGKSRGYGFVTFRHVDGALLALKEPSKKIDGRMTVTQLAAAGNSSSNVSSNNAADVSLRKIYVANVPYDMPADKLLAHFSFYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPVKNIEGRQLTCKLAIDGKKGKPDGPGQGQGPGSGPNAHGDGMGLA 273

HSP 2 Score: 89.3521 bits (220), Expect = 4.016e-18
Identity = 36/42 (85.71%), Postives = 40/42 (95.24%), Query Frame = 1 
Query: 1171 RYPEGGHYGLSAYQNQHHQQAGTSPLPRVPQGGMYPNVPPYF 1296
            R+PE GHYGLS+YQNQHHQQAGTSP+PRVP GGMYPNVPPY+
Sbjct:  399 RFPESGHYGLSSYQNQHHQQAGTSPMPRVPPGGMYPNVPPYY 440
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa008108m ()

HSP 1 Score: 266.544 bits (680), Expect = 1.836e-71
Identity = 138/220 (62.73%), Postives = 168/220 (76.36%), Query Frame = 1 
Query:    1 MDSTKKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL-XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPE 657
            MD TKKRK + NG V  +  S +  L+ EDAR+L++  T DQL+DILQ+A+ RH DVLD+VRS+ D D++ RKLFIRGLG DTT++ LRSLFSA+G+L+EAIVI DK TGKSKGYGFVTF+H DSAL+ALKEPSKKIDGR+TVTQ                  DVS RKIYV +VP+D+ S++LL+ F+ YGEIEEGPLGFDK TGK KG+A FVYKT E
Sbjct:    1 MDFTKKRKTELNGTVSLSPTSQSSSLTSEDARKLLQPLTQDQLIDILQNAVVRHPDVLDSVRSVTDKDSTLRKLFIRGLGADTTSDSLRSLFSAFGDLDEAIVIPDKATGKSKGYGFVTFKHADSALLALKEPSKKIDGRVTVTQFAAAGLTASFSNSNSNAADVSARKIYVGSVPFDISSERLLSTFSAYGEIEEGPLGFDKATGKSKGFAFFVYKTEE 220

HSP 2 Score: 59.6918 bits (143), Expect = 3.408e-9
Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            D +LRK+++  +  D  SD L + F+ +G+++E  +  DK TGK KGY    +K  + A  AL +P+K I+GR  + + A
Sbjct:   68 DSTLRKLFIRGLGADTTSDSLRSLFSAFGDLDEAIVIPDKATGKSKGYGFVTFKHADSALLALKEPSKKIDGRVTVTQFA 147
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa004648m ()

HSP 1 Score: 197.978 bits (502), Expect = 8.018e-51
Identity = 109/251 (43.43%), Postives = 145/251 (57.77%), Query Frame = 1 
Query:   31 ENGVVLDTDPSSAPKLSPEDA------RRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL------------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            +N  V  T  S+A  L+ + A      + L+E F+ DQL+ +L++A   H DV D +R +AD D   RK+F+ GLGWDT  E L S+F  YGE+E+   + DK +GKSKGYGF+ F+    A  ALK+P KKI  RMT  QL                            + + RKIYV+NV  D+   KLL  F+ +GEIEEGPLG DK TG+ KG+ LFVYK+PE A+ AL +P KN +G  L C+ AI
Sbjct:   85 QNENVTTTSTSAASDLAGDGADEDEPIQNLLEPFSKDQLIALLREAADTHGDVSDRIRKVADEDPIHRKIFVHGLGWDTNAETLTSVFKEYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALKQPQKKIGNRMTACQLAAIGPGPAPSTAAAVPVAVQAAQSQTVSEYTQRKIYVSNVGADLEPQKLLMFFSRFGEIEEGPLGLDKMTGRPKGFCLFVYKSPESAKRALEEPHKNFDGHILHCQKAI 335
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa005550m ()

HSP 1 Score: 183.726 bits (465), Expect = 1.565e-46
Identity = 97/217 (44.70%), Postives = 133/217 (61.29%), Query Frame = 1 
Query:   31 ENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL-----XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQ 666
            ++G V D+D  S+     E+   L++ +T DQL++++ +A S+   + + +R  AD D S RK+FI GLGWDTT E L + F  +GE+EE  ++LDK TGK+KGYGFV F+    A  ALK P K I  R+   QL                     D + RKIYV++VP+D+  +KL   FA +GEIE GP+GFD QTGKCKG+ALF+YKT EG Q
Sbjct:   56 DSGSVSDSDSDSSES-DVENLPELLQAYTKDQLIELIVEAASKDSALFNRIRDAADGDVSHRKIFIHGLGWDTTRETLVAAFEPFGEIEECNLVLDKATGKAKGYGFVLFKTRRGAAKALKNPKKNISNRIASCQLASVGPANNNTTTSSSSFNAQSDSASRKIYVSSVPHDVDGEKLRIFFAKFGEIETGPMGFDSQTGKCKGFALFLYKTVEGHQ 271

HSP 2 Score: 72.0182 bits (175), Expect = 6.635e-13
Identity = 38/80 (47.50%), Postives = 49/80 (61.25%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            DVS RKI++  + +D   + L+A F  +GEIEE  L  DK TGK KGY   ++KT  GA  AL +P KNI  R   C+LA
Sbjct:  112 DVSHRKIFIHGLGWDTTRETLVAAFEPFGEIEECNLVLDKATGKAKGYGFVLFKTRRGAAKALKNPKKNISNRIASCQLA 191
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa001255m ()

HSP 1 Score: 171.014 bits (432), Expect = 1.050e-42
Identity = 89/245 (36.33%), Postives = 144/245 (58.78%), Query Frame = 1 
Query:    1 MDSTKKRKLDE---NGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDALSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            M+  KKRK++E   NG  + T        S +  R L++     QL+D+L     ++  + + ++ +A  D   RKLF+RGL W+T+++ LR+ FS +GE+EE  VI DK +GKS+GYGF+T+++++S   AL+ PSK IDGR+ V  L                D++ RK+Y+  +  ++ S+ LL  F  +G+IEEG + +DK T + +G+    Y+T E A+ A+ DP K + GR ++ KLA
Sbjct:    1 MEDVKKRKIEEASGNGEEIST-------YSEDHLRSLLDPLAKPQLVDLLAKLGCQYPSIAEEIKGVASADPVHRKLFVRGLAWNTSSDTLRAAFSEHGEIEEGAVIYDKASGKSRGYGFITYKYMESTQHALRAPSKLIDGRLAVCNL----ACEGLSGTSATLDLTQRKLYIGGLSPNVTSEMLLHFFGRHGDIEEGSVAYDKDTNESRGFGFVTYRTVEAAKKAIDDPQKTLGGRNIIVKLA 234
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa023522m ()

HSP 1 Score: 139.428 bits (350), Expect = 3.384e-33
Identity = 76/179 (42.46%), Postives = 98/179 (54.75%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQL------------XXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEG 702
            D   RK+F  GLGWDT  E L S+F  YGE+E+   + DK +GKSKGYGF+ F+    A  ALK+P K+I  RMT  QL                            + + RKIYV+NV  D+   KLL  F+ +GEIEEGPLG DK TG+ KG+ LFVYK+       ++   K I+G
Sbjct:   16 DPIHRKIFAHGLGWDTNAETLTSVFKEYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALKQPRKEIGNRMTACQLAAIGPGPAPSAAAAVPVAVQAAQSQTVSEYTQRKIYVSNVGADLEPRKLLMFFSRFGEIEEGPLGLDKMTGRPKGFCLFVYKSQRNFDGHILHCQKAIDG 194

HSP 2 Score: 59.6918 bits (143), Expect = 3.408e-9
Identity = 31/76 (40.79%), Postives = 43/76 (56.58%), Query Frame = 1 
Query:  499 RKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            RKI+   + +D  ++ L + F  YGEIE+     DK +GK KGY   ++KT  GA+ AL  P K I  R   C+LA
Sbjct:   20 RKIFAHGLGWDTNAETLTSVFKEYGEIEDCKAVCDKVSGKSKGYGFILFKTRSGARKALKQPRKEIGNRMTACQLA 95
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa006895m ()

HSP 1 Score: 87.0409 bits (214), Expect = 1.993e-17
Identity = 47/155 (30.32%), Postives = 81/155 (52.26%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRH---VDSALMALKEPSKKIDGRMTVTQLXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPE 657
            D++  KLF+ G+ W+TT E   + FS YGE+ ++++++DK +G+ +G+GFVTF     VDS L    E    IDGR+   +                     +KI+V  +P  +  D+L  +F+ YG I E  +  D +TG+ +G+    ++  +
Sbjct:   69 DSAAGKLFVGGVSWETTEEAFTNYFSKYGEIADSVIMIDKHSGRPRGFGFVTFADPGVVDSVL----EEEHVIDGRVVEVKRTVPRENMGFKGIS-----KRKKIFVGGIPTSLTDDELGEYFSTYGSIVEHQIMVDHKTGRSRGFGFVTFENED 214
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa005309m ()

HSP 1 Score: 84.3445 bits (207), Expect = 1.292e-16
Identity = 49/187 (26.20%), Postives = 90/187 (48.13%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALM-ALKEPSKKIDGRMTVTQ----------LXXXXXXXXXXXXXXXXDVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAI 729
            D+ Q KLFI G+ W+T+ + L+  FS YG++ + +V+ DK TG+ +G+GFV F  VD A++  + +    IDGR    +                           ++  +KI+V  +P  +  +    +F  YG + +  + +D+ TG+ +G+    + T E     L     ++ G+Q+  K A+
Sbjct:    2 DSDQGKLFIGGISWETSEDKLKEYFSNYGDVLQTVVMRDKVTGRPRGFGFVVF--VDPAVLDRVLQDKHTIDGRTVEAKRALSREEQQTTGRVGNANPTRSAGNGGNIRTKKIFVGGLPPTLSEEGFREYFETYGHVTDVVVMYDQSTGRPRGFGFISFDTEEAVDRVLHKTFHDLNGKQVEVKRAL 186
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa019392m ()

HSP 1 Score: 82.4185 bits (202), Expect = 4.910e-16
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGR 420
            D +  K+F+ GL W+T T+ +R  F  +GE+ EA++I DK TGKSKGYGFVTFR  +SA  A   P+  IDGR
Sbjct:   12 DTTFTKVFVGGLAWETPTDEMRRYFQQFGEILEAVIIADKNTGKSKGYGFVTFRDSESARRACANPNPVIDGR 84

HSP 2 Score: 60.8474 bits (146), Expect = 1.530e-9
Identity = 27/80 (33.75%), Postives = 46/80 (57.50%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            D +  K++V  + ++ P+D++  +F  +GEI E  +  DK TGK KGY    ++  E A+ A  +P   I+GR+  C +A
Sbjct:   12 DTTFTKVFVGGLAWETPTDEMRRYFQQFGEILEAVIIADKNTGKSKGYGFVTFRDSESARRACANPNPVIDGRRANCNIA 91
[Close]
BLAST of MDP0000596919 vs. GDR
Match: ppa018926m ()

HSP 1 Score: 82.4185 bits (202), Expect = 4.910e-16
Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 1 
Query:  202 DASQRKLFIRGLGWDTTTEGLRSLFSAYGELEEAIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGR 420
            D +  K+F+ GL W+T T+ +R  F  +GE+ EA++I DK TGKSKGYGFVTFR  +SA  A   P+  IDGR
Sbjct:    7 DTTFTKVFVGGLAWETPTDEMRRYFQQFGEILEAVIIADKNTGKSKGYGFVTFRDSESARRACANPNPVIDGR 79

HSP 2 Score: 60.8474 bits (146), Expect = 1.530e-9
Identity = 27/80 (33.75%), Postives = 46/80 (57.50%), Query Frame = 1 
Query:  487 DVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGFDKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLA 726
            D +  K++V  + ++ P+D++  +F  +GEI E  +  DK TGK KGY    ++  E A+ A  +P   I+GR+  C +A
Sbjct:    7 DTTFTKVFVGGLAWETPTDEMRRYFQQFGEILEAVIIADKNTGKSKGYGFVTFRDSESARRACANPNPVIDGRRANCNIA 86
The following BLAST results are available for this feature:
BLAST of MDP0000596919 vs. NCBI nr
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs NCBI nr)
Total hits: 25
Match NameE-valueIdentityDescription
gi|356545259|ref|XP_003541062.1|3.021e-9667.77PREDICTED: polyadenylate-binding protein, cytoplas... [more]
gi|225461628|ref|XP_002285377.1|5.153e-9668.38PREDICTED: uncharacterized protein LOC100248626 [V... [more]
gi|356517062|ref|XP_003527209.1|6.730e-9667.77PREDICTED: polyadenylate-binding protein, cytoplas... [more]
gi|224061320|ref|XP_002300424.1|5.697e-9572.29predicted protein [Populus trichocarpa] >gi|222847... [more]
gi|15232459|ref|NP_188119.1|2.563e-8763.04RNA recognition motif-containing protein [Arabidop... [more]
gi|379061692|gb|AFC89654.1|2.834e-8668.85RBP42 [Elaeis guineensis][more]
gi|297830052|ref|XP_002882908.1|3.133e-8562.45hypothetical protein ARALYDRAFT_478927 [Arabidopsi... [more]
gi|297853100|ref|XP_002894431.1|2.653e-8461.82hypothetical protein ARALYDRAFT_892356 [Arabidopsi... [more]
gi|255563118|ref|XP_002522563.1|1.967e-7962.35Heterogeneous nuclear ribonucleoprotein A1, putati... [more]
gi|242058013|ref|XP_002458152.1|4.535e-7662.10hypothetical protein SORBIDRAFT_03g027820 [Sorghum... [more]

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BLAST of MDP0000596919 vs. Vitis vinifera
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Vitis vinifera)
Total hits: 25
Match NameE-valueIdentityDescription
GSVIVT010374910013.988e-5145.18assembled CDS[more]
GSVIVT010221970012.189e-4942.44assembled CDS[more]
GSVIVT010335160011.201e-4740.57assembled CDS[more]
GSVIVT010374900011.794e-4342.65assembled CDS[more]
GSVIVT010274340016.427e-1750.68assembled CDS[more]
GSVIVT010134300013.190e-1634.44assembled CDS[more]
GSVIVT010371340015.441e-1650.68assembled CDS[more]
GSVIVT010168720015.441e-1631.06assembled CDS[more]
GSVIVT010090450017.106e-1652.05assembled CDS[more]
GSVIVT010300400019.281e-1627.68assembled CDS[more]

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BLAST of MDP0000596919 vs. ExPASy Swiss-Prot
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt Swiss-Prot)
Total hits: 25
Match NameE-valueIdentityDescription
HNRPD_MOUSE4.696e-1628.74Heterogeneous nuclear ribonucleoprotein D0 OS=Mus ... [more]
MSIR6_DROME6.133e-1628.24RNA-binding protein Musashi homolog Rbp6 OS=Drosop... [more]
HNRPD_HUMAN6.133e-1628.13Heterogeneous nuclear ribonucleoprotein D0 OS=Homo... [more]
ROA1_RAT8.009e-1629.89Heterogeneous nuclear ribonucleoprotein A1 OS=Ratt... [more]
HNRPD_RAT1.046e-1526.67Heterogeneous nuclear ribonucleoprotein D0 OS=Ratt... [more]
RA1L2_HUMAN2.330e-1527.91Heterogeneous nuclear ribonucleoprotein A1-like 2 ... [more]
ROA0_MOUSE3.044e-1527.49Heterogeneous nuclear ribonucleoprotein A0 OS=Mus ... [more]
YHKF_SCHPO3.975e-1527.06Uncharacterized RNA-binding protein C660.15 OS=Sch... [more]
ROA1_PANTR3.975e-1527.91Heterogeneous nuclear ribonucleoprotein A1 OS=Pan ... [more]
ROA1_MOUSE3.975e-1527.91Heterogeneous nuclear ribonucleoprotein A1 OS=Mus ... [more]

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BLAST of MDP0000596919 vs. ExPASy TrEMBL
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs UniProt TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A5ADJ5_VITVI5.606e-9668.38Putative uncharacterized protein OS=Vitis vinifera... [more]
I1KDM3_SOYBN7.322e-9667.77Uncharacterized protein OS=Glycine max PE=4 SV=1[more]
B9GGV7_POPTR6.198e-9572.29Predicted protein (Fragment) OS=Populus trichocarp... [more]
I1LSV2_SOYBN1.057e-9473.75Uncharacterized protein OS=Glycine max GN=Gma.4761... [more]
Q9LKA4_ARATH2.789e-8763.04AT3G15010 protein OS=Arabidopsis thaliana GN=At3g1... [more]
H9AWW7_ELAGV3.083e-8668.85RBP42 OS=Elaeis guineensis var. tenera PE=4 SV=1[more]
D7L3Y0_ARALL3.409e-8562.45Putative uncharacterized protein OS=Arabidopsis ly... [more]
D7KKF6_ARALL2.886e-8461.82Putative uncharacterized protein OS=Arabidopsis ly... [more]
B9S994_RICCO2.140e-7962.35Heterogeneous nuclear ribonucleoprotein A1, putati... [more]
C5XR08_SORBI4.934e-7662.10Putative uncharacterized protein Sb03g027820 OS=So... [more]

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BLAST of MDP0000596919 vs. TAIR10
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs TAIR 10)
Total hits: 25
Match NameE-valueIdentityDescription
AT3G15010.28.402e-9063.04| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT3G15010.18.402e-9063.04| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT3G56860.52.315e-4743.56| Symbols: UBA2A | UBP1-associated protein 2A | ch... [more]
AT3G56860.42.315e-4743.56| Symbols: UBA2A | UBP1-associated protein 2A | ch... [more]
AT3G56860.22.315e-4743.56| Symbols: UBA2A | UBP1-associated protein 2A | ch... [more]
AT3G56860.12.315e-4743.56| Symbols: UBA2A | UBP1-associated protein 2A | ch... [more]
AT3G56860.32.315e-4743.56| Symbols: UBA2A | UBP1-associated protein 2A | ch... [more]
AT2G41060.28.796e-4745.41| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT2G41060.18.796e-4745.41| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]
AT2G22100.19.464e-2537.24| Symbols: | RNA-binding (RRM/RBD/RNP motifs) fam... [more]

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BLAST of MDP0000596919 vs. Populus trichicarpa v2.0
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Populus trichocarpa v2.0)
Total hits: 25
Match NameE-valueIdentityDescription
POPTR_0001s38640.12.127e-9772.29[more]
POPTR_0004s05450.18.401e-7858.13[more]
POPTR_0011s07480.17.112e-7760.41[more]
POPTR_0016s02440.11.764e-5145.81[more]
POPTR_0006s02650.12.816e-4944.93[more]
POPTR_0005s08340.11.709e-4643.52[more]
POPTR_0001s22780.16.288e-4141.59[more]
POPTR_0006s20530.11.898e-2935.78[more]
POPTR_0014s18470.12.571e-1829.55[more]
POPTR_0002s26030.12.842e-1726.70[more]

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BLAST of MDP0000596919 vs. GDR
Analysis Date: 2012-07-23 (BLASTx of Malus x domestica v1.0 mRNA vs Prunus persica v1.0)
Total hits: 25
Match NameE-valueIdentityDescription
ppa005857m1.061e-11979.49[more]
ppa008108m1.836e-7162.73[more]
ppa004648m8.018e-5143.43[more]
ppa005550m1.565e-4644.70[more]
ppa001255m1.050e-4236.33[more]
ppa023522m3.384e-3342.46[more]
ppa006895m1.993e-1730.32[more]
ppa005309m1.292e-1626.20[more]
ppa019392m4.910e-1652.05[more]
ppa018926m4.910e-1652.05[more]

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InterPro
Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 74..140
score: 1.2e-16coord: 169..237
score: 9.8
IPR000504RNA recognition motif domainSMARTSM00360RNA recognition motifcoord: 73..145
score: 1.6e-21coord: 168..240
score: 7
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 72..149
score: 16.057coord: 167..247
score: 12
IPR012677Nucleotide-binding, alpha-beta plaitGENE3D3.30.70.330no descriptioncoord: 67..152
score: 3.3e-22coord: 165..259
score: 3
NoneNo IPR availablePANTHERPTHR24011FAMILY NOT NAMEDcoord: 6..432
score: 3.4e
NoneNo IPR availablePANTHERPTHR24011:SF217SUBFAMILY NOT NAMEDcoord: 6..432
score: 3.4e
NoneNo IPR availableSEGsegsegcoord: 147..162
score: NAcoord: 244..263
score: NAcoord: 274..314
score: NAcoord: 322..372
score: NAcoord: 374..390
score
NoneNo IPR availableSUPERFAMILY54928RNA-binding domain, RBDcoord: 66..251
score: 1.2
NoneNo IPR availableSEGsegsegcoord: 20..28
score: NAcoord: 34..97
score
NoneNo IPR availableSEGsegsegcoord: 1..20
score
NoneNo IPR availableSEGsegsegcoord: 13..32
score
NoneNo IPR availableSEGsegsegcoord: 1..27
score
NoneNo IPR availableSEGsegsegcoord: 38..70
score: NAcoord: 73..105
score
NoneNo IPR availableSEGsegsegcoord: 8..35
score
NoneNo IPR availableSEGsegsegcoord: 10..26
score: NAcoord: 70..75
score
NoneNo IPR availableSEGsegsegcoord: 38..45
score: NAcoord: 101..116
score: NAcoord: 118..140
score: NAcoord: 170..178
score
NoneNo IPR availableSEGsegsegcoord: 68..88
score: NAcoord: 95..110
score: NAcoord: 210..216
score: NAcoord: 270..287
score
NoneNo IPR availableSEGsegsegcoord: 24..50
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>MDP0000596919 ID=MDP0000596919; Name=MDP0000596919; organism=Malus x domestica; type=mRNA; length=1299bp
ATGGACTCAACCAAGAAGCGAAAGCTGGACGAGAACGGCGTCGTTCTGGA
CACGGATCCCTCCTCCGCCCCCAAGCTCTCCCCCGAAGACGCTCGCAGGC
TCATCGAGCGATTCACCCCCGATCAACTCCTCGACATTCTCCAAGACGCC
CTCTCCCGCCACGTCGACGTTCTCGACGCCGTCCGCTCCATCGCCGATCC
CGACGCCTCCCAGCGCAAGCTCTTCATCCGCGGCCTCGGCTGGGACACCA
CCACCGAGGGCCTCCGATCCCTCTTCTCCGCCTACGGCGAGCTGGAGGAG
GCTATCGTTATCCTCGACAAAACCACCGGAAAATCCAAGGGTTACGGGTT
CGTCACGTTCCGCCACGTTGACAGTGCTCTCATGGCCCTGAAAGAACCGA
GCAAGAAGATCGACGGCCGCATGACCGTCACGCAGCTCGCCTCCGCGGGG
AATTCGAACTCCAACACCGCCTCCAACAACGTCGCTGACGTATCGTTGCG
GAAGATTTATGTGGCCAATGTTCCCTATGACATGCCATCGGATAAGCTCT
TGGCGCATTTTGCTCTGTACGGGGAGATAGAGGAGGGCCCGCTAGGGTTT
GATAAGCAGACTGGGAAGTGCAAAGGGTATGCGCTGTTTGTGTATAAGAC
TCCGGAGGGGGCTCAGGCGGCGCTTGTTGATCCGGCGAAGAACATCGAGG
GGAGGCAGTTGCTTTGTAAATTGGCGATTGATGGGAAAAAGAGCAAGTCG
GACGGGCCGGGGCAGGGTCAAGGACCCGGGAGTGGTTCCAATGCGCATGG
AGATGGGATGGGGATGGCACCGCCGTCTTCGATTCCTGGGCAGTACGGCA
TCCCAGGTGGAATTGGTTCTTATGGTGGGTATAACAGTGGGCTTCAGGGC
CAGCCTCCATTGGGTCACCATCCATTGGGTGGGCCTGGGTTGTCTGGTAT
TGGAAACCAGGTGAATTCGGGTTTGGGTGGTGGTGGTGGATATGGAGGGT
TGGGTGGGCCTTATGGTAACTATGGCGGGCCTGGGGGTTATGGTTTAGGT
GGTGCCGGTGGGTTGGGTGGTGGACTTGGTGGTGCTGGGTCGGGTGGTCC
AGTTGGTGGTGTGGGTACTGGGTCGTCTTTATATGGATTGCCTCCGAGTT
CAGGTGGGTTACCATCTGGTAGGTATCCGGAGGGTGGGCACTACGGCCTG
TCGGCCTATCAGAATCAGCACCACCAGCAAGCTGGAACGTCACCCCTTCC
AAGGGTTCCTCAAGGTGGCATGTACCCAAATGTGCCACCTTATTTCTGA
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protein sequence of MDP0000596919

>MDP0000596919 ID=MDP0000596919; Name=MDP0000596919; organism=Malus x domestica; type=polypeptide; length=433bp
MDSTKKRKLDENGVVLDTDPSSAPKLSPEDARRLIERFTPDQLLDILQDA
LSRHVDVLDAVRSIADPDASQRKLFIRGLGWDTTTEGLRSLFSAYGELEE
AIVILDKTTGKSKGYGFVTFRHVDSALMALKEPSKKIDGRMTVTQLASAG
NSNSNTASNNVADVSLRKIYVANVPYDMPSDKLLAHFALYGEIEEGPLGF
DKQTGKCKGYALFVYKTPEGAQAALVDPAKNIEGRQLLCKLAIDGKKSKS
DGPGQGQGPGSGSNAHGDGMGMAPPSSIPGQYGIPGGIGSYGGYNSGLQG
QPPLGHHPLGGPGLSGIGNQVNSGLGGGGGYGGLGGPYGNYGGPGGYGLG
GAGGLGGGLGGAGSGGPVGGVGTGSSLYGLPPSSGGLPSGRYPEGGHYGL
SAYQNQHHQQAGTSPLPRVPQGGMYPNVPPYF*
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mRNA from alignment at unanchored:12693822..12695120-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000596919 ID=MDP0000596919; Name=MDP0000596919; organism=Malus x domestica; type=mRNA; location=Sequence derived from: unanchored:12693822..12695120- (Malus x domestica
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mRNA from alignment at MDC000229.266:15687..16985-

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000596919 ID=MDP0000596919; Name=MDP0000596919; organism=Malus x domestica; type=mRNA; length=1299bp; location=Sequence derived from: MDC000229.266:15687..16985- (Malus x domestica
ATGGACTCAACCAAGAAGCGAAAGCTGGACGAGAACGGCGTCGTTCTGGA
CACGGATCCCTCCTCCGCCCCCAAGCTCTCCCCCGAAGACGCTCGCAGGC
TCATCGAGCGATTCACCCCCGATCAACTCCTCGACATTCTCCAAGACGCC
CTCTCCCGCCACGTCGACGTTCTCGACGCCGTCCGCTCCATCGCCGATCC
CGACGCCTCCCAGCGCAAGCTCTTCATCCGCGGCCTCGGCTGGGACACCA
CCACCGAGGGCCTCCGATCCCTCTTCTCCGCCTACGGCGAGCTGGAGGAG
GCTATCGTTATCCTCGACAAAACCACCGGAAAATCCAAGGGTTACGGGTT
CGTCACGTTCCGCCACGTTGACAGTGCTCTCATGGCCCTGAAAGAACCGA
GCAAGAAGATCGACGGCCGCATGACCGTCACGCAGCTCGCCTCCGCGGGG
AATTCGAACTCCAACACCGCCTCCAACAACGTCGCTGACGTATCGTTGCG
GAAGATTTATGTGGCCAATGTTCCCTATGACATGCCATCGGATAAGCTCT
TGGCGCATTTTGCTCTGTACGGGGAGATAGAGGAGGGCCCGCTAGGGTTT
GATAAGCAGACTGGGAAGTGCAAAGGGTATGCGCTGTTTGTGTATAAGAC
TCCGGAGGGGGCTCAGGCGGCGCTTGTTGATCCGGCGAAGAACATCGAGG
GGAGGCAGTTGCTTTGTAAATTGGCGATTGATGGGAAAAAGAGCAAGTCG
GACGGGCCGGGGCAGGGTCAAGGACCCGGGAGTGGTTCCAATGCGCATGG
AGATGGGATGGGGATGGCACCGCCGTCTTCGATTCCTGGGCAGTACGGCA
TCCCAGGTGGAATTGGTTCTTATGGTGGGTATAACAGTGGGCTTCAGGGC
CAGCCTCCATTGGGTCACCATCCATTGGGTGGGCCTGGGTTGTCTGGTAT
TGGAAACCAGGTGAATTCGGGTTTGGGTGGTGGTGGTGGATATGGAGGGT
TGGGTGGGCCTTATGGTAACTATGGCGGGCCTGGGGGTTATGGTTTAGGT
GGTGCCGGTGGGTTGGGTGGTGGACTTGGTGGTGCTGGGTCGGGTGGTCC
AGTTGGTGGTGTGGGTACTGGGTCGTCTTTATATGGATTGCCTCCGAGTT
CAGGTGGGTTACCATCTGGTAGGTATCCGGAGGGTGGGCACTACGGCCTG
TCGGCCTATCAGAATCAGCACCACCAGCAAGCTGGAACGTCACCCCTTCC
AAGGGTTCCTCAAGGTGGCATGTACCCAAATGTGCCACCTTATTTCTGA
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Coding sequence (CDS) from alignment at MDC000229.266:15687..16985-

>MDP0000596919 ID=MDP0000596919; Name=MDP0000596919; organism=Malus x domestica; type=CDS; length=1299bp; location=Sequence derived from: MDC000229.266:15687..16985- (Malus x domestica
ATGGACTCAACCAAGAAGCGAAAGCTGGACGAGAACGGCGTCGTTCTGGA
CACGGATCCCTCCTCCGCCCCCAAGCTCTCCCCCGAAGACGCTCGCAGGC
TCATCGAGCGATTCACCCCCGATCAACTCCTCGACATTCTCCAAGACGCC
CTCTCCCGCCACGTCGACGTTCTCGACGCCGTCCGCTCCATCGCCGATCC
CGACGCCTCCCAGCGCAAGCTCTTCATCCGCGGCCTCGGCTGGGACACCA
CCACCGAGGGCCTCCGATCCCTCTTCTCCGCCTACGGCGAGCTGGAGGAG
GCTATCGTTATCCTCGACAAAACCACCGGAAAATCCAAGGGTTACGGGTT
CGTCACGTTCCGCCACGTTGACAGTGCTCTCATGGCCCTGAAAGAACCGA
GCAAGAAGATCGACGGCCGCATGACCGTCACGCAGCTCGCCTCCGCGGGG
AATTCGAACTCCAACACCGCCTCCAACAACGTCGCTGACGTATCGTTGCG
GAAGATTTATGTGGCCAATGTTCCCTATGACATGCCATCGGATAAGCTCT
TGGCGCATTTTGCTCTGTACGGGGAGATAGAGGAGGGCCCGCTAGGGTTT
GATAAGCAGACTGGGAAGTGCAAAGGGTATGCGCTGTTTGTGTATAAGAC
TCCGGAGGGGGCTCAGGCGGCGCTTGTTGATCCGGCGAAGAACATCGAGG
GGAGGCAGTTGCTTTGTAAATTGGCGATTGATGGGAAAAAGAGCAAGTCG
GACGGGCCGGGGCAGGGTCAAGGACCCGGGAGTGGTTCCAATGCGCATGG
AGATGGGATGGGGATGGCACCGCCGTCTTCGATTCCTGGGCAGTACGGCA
TCCCAGGTGGAATTGGTTCTTATGGTGGGTATAACAGTGGGCTTCAGGGC
CAGCCTCCATTGGGTCACCATCCATTGGGTGGGCCTGGGTTGTCTGGTAT
TGGAAACCAGGTGAATTCGGGTTTGGGTGGTGGTGGTGGATATGGAGGGT
TGGGTGGGCCTTATGGTAACTATGGCGGGCCTGGGGGTTATGGTTTAGGT
GGTGCCGGTGGGTTGGGTGGTGGACTTGGTGGTGCTGGGTCGGGTGGTCC
AGTTGGTGGTGTGGGTACTGGGTCGTCTTTATATGGATTGCCTCCGAGTT
CAGGTGGGTTACCATCTGGTAGGTATCCGGAGGGTGGGCACTACGGCCTG
TCGGCCTATCAGAATCAGCACCACCAGCAAGCTGGAACGTCACCCCTTCC
AAGGGTTCCTCAAGGTGGCATGTACCCAAATGTGCCACCTTATTTCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding