RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1, RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1
dbSNP IDss475876829
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1
50K SNP array for apple:AX-105193329
TypeSNP
SNP AllelesT/C
5' Flanking SequenceCTAGAAAACGCCTGAAAAACGGGTCTTTCCGGACC
3' Flanking SequenceAACTGCCAGAAAAAGGAGGAAGAAATAGAAACCCA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Pear-PM-F1-PEAR37N/A48RosBREED_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1View
2Apple-M432-20137N/A45.71RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1View
3Apple-M432-2013-physical-Malus-domestica1N/A22846134RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1View
4Apple-BB-F17N/A43.87RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1View
5Apple-NC-F17N/A72.01RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1View
6Apple-NCZFBB-consensus7N/A56RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1View
7Apple-ZF-F17N/A60.35RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1View
8Apple-Honeycrisp_Consensus-F17N/A50.52RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1View
9Pear-PH-CG-2017LG7N/A34.85RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1View
Sequence
>RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1 ID=RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1; Name=RosBREEDSNP_SNP_AG_22846134_Lg1_MdExp7_MAF40_1635125_exon1; organism=Malus x domestica; type=genetic_marker; length=71bp
CTAGAAAACGCCTGAAAAACGGGTCTTTCCGGACCYAACTGCCAGAAAAA
GGAGGAAGAAATAGAAACCCA
Alignments
Feature NameTypeLocationAnalysis
MDC001491.325 contig MDC001491.325:13879..13879. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr07 chromosome Chr07:27781376..27781376. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation