MDC005619.261, MDC005619.261 (contig) Malus x domestica

Contig Overview
NameMDC005619.261
Unique NameMDC005619.261
Typecontig
OrganismMalus x domestica (Apple)
Sequence length6064
Analyses
This contig is derived from or has results from the following analyses
Analysis NameDate Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation2012-07-26
Alignments
Feature NameTypeLocationAnalysis
MDP0000555376 mRNA MDP0000555376:2324..3035- Malus x domestica Whole Genome v1.0 Assembly & Annotation
MDP0000555376_exon_1 CDS MDP0000555376_exon_1:2324..2544- Malus x domestica Whole Genome v1.0 Assembly & Annotation
MDP0000555376_exon_2 CDS MDP0000555376_exon_2:2912..3035- Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33541820_Lg10_01683_MAF10_MDP0000744586_exon2 genetic_marker RosBREEDSNP_SNP_GA_33541820_Lg10_01683_MAF10_MDP0000744586_exon2:2538..2538. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33541820_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33541820_Lg10:2538..2538. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TG_33541901_Lg10 genetic_marker RosBREEDSNP_SNP_TG_33541901_Lg10:2619..2619. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CA_33541917_Lg10 genetic_marker RosBREEDSNP_SNP_CA_33541917_Lg10:2635..2635. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_33541936_Lg10 genetic_marker RosBREEDSNP_SNP_AG_33541936_Lg10:2654..2654. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_33542203_Lg10 genetic_marker RosBREEDSNP_SNP_TC_33542203_Lg10:2921..2921. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_33542237_Lg10 genetic_marker RosBREEDSNP_SNP_AG_33542237_Lg10:2955..2955. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CT_33542241_Lg10 genetic_marker RosBREEDSNP_SNP_CT_33542241_Lg10:2959..2959. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CA_33542490_Lg10 genetic_marker RosBREEDSNP_SNP_CA_33542490_Lg10:3208..3208. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_33542501_Lg10 genetic_marker RosBREEDSNP_SNP_AG_33542501_Lg10:3219..3219. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CT_33542512_Lg10 genetic_marker RosBREEDSNP_SNP_CT_33542512_Lg10:3230..3230. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33542542_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33542542_Lg10:3260..3260. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CT_33542550_Lg10 genetic_marker RosBREEDSNP_SNP_CT_33542550_Lg10:3268..3268. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33542571_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33542571_Lg10:3289..3289. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_33542594_Lg10 genetic_marker RosBREEDSNP_SNP_TC_33542594_Lg10:3312..3312. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33542612_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33542612_Lg10:3330..3330. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33542618_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33542618_Lg10:3336..3336. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_33542632_Lg10 genetic_marker RosBREEDSNP_SNP_AG_33542632_Lg10:3350..3350. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TG_33542650_Lg10 genetic_marker RosBREEDSNP_SNP_TG_33542650_Lg10:3368..3368. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GT_33542666_Lg10 genetic_marker RosBREEDSNP_SNP_GT_33542666_Lg10:3384..3384. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_33542704_Lg10 genetic_marker RosBREEDSNP_SNP_TC_33542704_Lg10:3422..3422. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CA_33542723_Lg10 genetic_marker RosBREEDSNP_SNP_CA_33542723_Lg10:3441..3441. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CT_33542767_Lg10 genetic_marker RosBREEDSNP_SNP_CT_33542767_Lg10:3485..3485. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AC_33542773_Lg10 genetic_marker RosBREEDSNP_SNP_AC_33542773_Lg10:3491..3491. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AG_33542932_Lg10 genetic_marker RosBREEDSNP_SNP_AG_33542932_Lg10:3650..3650. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_33543527_Lg10 genetic_marker RosBREEDSNP_SNP_TC_33543527_Lg10:4245..4245. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33543537_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33543537_Lg10:4255..4255. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_33543539_Lg10 genetic_marker RosBREEDSNP_SNP_TC_33543539_Lg10:4257..4257. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33543583_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33543583_Lg10:4301..4301. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33543586_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33543586_Lg10:4304..4304. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33543588_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33543588_Lg10:4306..4306. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_AC_33543603_Lg10 genetic_marker RosBREEDSNP_SNP_AC_33543603_Lg10:4321..4321. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_GA_33543608_Lg10 genetic_marker RosBREEDSNP_SNP_GA_33543608_Lg10:4326..4326. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_TC_33543610_Lg10 genetic_marker RosBREEDSNP_SNP_TC_33543610_Lg10:4328..4328. Malus x domestica Whole Genome v1.0 Assembly & Annotation
RosBREEDSNP_SNP_CT_33544092_Lg10 genetic_marker RosBREEDSNP_SNP_CT_33544092_Lg10:4810..4810. Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr10 chromosome chr10:29242373..29248436+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
Sequences
The following sequences are available for this feature:

contig sequence

>MDC005619.261 ID=MDC005619.261|Name=MDC005619.261|organism=Malus x domestica|type=contig|length=6064bp
CTGCTTGTTCCTTCTGCACCTTGTCTCCACATGCTGCAAGGTATCATTTT
CACTTGCCTTATCTGTTCTCCAGGCAGATGTGGCAGCTTCTTTGGAAGTA
CAGCAGCAGTGGGAAACGAGTACTCGAGAGCAGTGCTAGGTAGGCAATCA
GGGAAGGGTTCCAAGCAGTCGGTTCCTTACCCAAGTTTAAGTGGAAGTTC
CGGCATATTGTTTTCTTTATCCTTGTCTTTGTAGGTAAGAACAAGGACAA
AGGAAAGGACAGGGAGAACGCATGATATGAGATACTTTTGCTTTCTACCC
TGGTGATATGAGATACTTTTGCTTTGGTGTTATTTGTTTGCTGAGGTACC
CCAAGGAATAAGGAACACTGAGTGACTCGAGAGGTTTCGTTGGGAAGGCA
TTCTCGGAGATGAAGAAAGGTTCCGTATGTCTGCCTTGCTATGGAGGGCG
AAGATGGACAGTTATAGGGAGTTCCTTAATACCTGTAGAGGTACTGTTCT
TTCACTCGTGTCAGTAGCCAATGCGTGATTGATCAGTATGGCTTCACGTG
CTTTCTTCTTTATCAGCAATCTTCGACAAATTGTCCGTAATTTCCGCCAG
GCTGAGTGTGCATGTGACATGTGTTAACGTGGCTGAAGAAGACTGGCGCT
TCTTCAATAACTGGGATCGGCGCTTCGACAAATTACCCGTGATTTCCGCA
AAGCTGAGTTTGCGTGTGATGGGTGCTGATGTGTCTGGAAAAGACTGGCG
TCTCCTCGATATCTARGATCGGCGCTTCGACAAATCACCCGTGATTTCCG
TAAAGCTGAGTTTGCGTGTGATGGGTGCTGATGTGTCTGGAAAAGACTGG
CGTCTCCTCGATATCTGGGATCGGCACTTCGACAAATCACCCGTGATTTC
CGCAAAGCTGAGTTTGCGTGTGATGGGTGCTGACGCGTCTGGAAAAGCAA
GATGCCTCTCCGATTTCTGAGCTTGCCTCTTCGATTTTTGAATTGGCCTC
TTCGAATTCTGAGCTTGCCTCTTCGATCTCTGAAAGCCCGTTGAGTGCTG
ATTTTTATAGAGGCACGCAGTTCGTTTCAAAGCACACTTGAATTTTCGCT
TGCAGAAACTCCCTTCTTGCACTTCTAAGATCTTGATCTATCTGACCTCT
TCTTTCTTCAACACCTTTGAAAATGTYTGGACCCTCCGACCGTCGTTTCG
ATTTGAACCTTGGTGAAGAGGCAGTCCCGCCTTCTCCTGACAACATATGG
CGCCCATCATTCATATCCCCTACTGGTCCTCTTACCGTTGGGGATTCGGT
GATGAAGAATGATATGACCGCTGCGGTGGTGGCCCGGAACCTTGTCACTC
CTAAAGATAGCAGACTGCTTTCCAAGCGGTCTGATGAGTTGGCTGTTAAG
GAGTCTCTGGCCCTTAGTGTGCAGTGTGCGGGTTCTGTGTCCAACATGGC
CCAACGCCTATTTGCTCGAACCCGTCAAGTTGAATCGTTGGCGGCTGAAG
TGATGAGTCTCAAACAAGAGATTAGAGGGCTCAAGCATGAGAATAAACAG
TTGCACAGGCTCGCACACGACTATGCCACAAACATGAAGAGGAAAATTGA
CCAGATGCAGGAATCTGATGGTCAGATTTTACTTGATCATCGGAGGTTTR
TGGGTTTGTTCCAACAGCATTTGCCTTCGTCTTCTGGGGCTGTACCGCGT
AGCGAAGCTCTGAATGACCAACCTCCGAYACCTCCTCCTTCTGTGGCCCC
GCCGAYTGCTGAGGCTCCGCCCGAGCAAACTTCGTGAAGGCTCTCTCTCG
TTTGTTTATTTTTTTATTTATGTATATGTACATATTTGTAATTTATCGAA
AAYATTAATAAATGAGCTTTATTTCACTTAGYGTCTATATGTACATCTTT
TCTTTATTTTTTATTTAYTTTATTTTATTTTWTATTTTATTTATTTATTT
ATTTTATTTTACCAAYTCTMTCTRTCTCTTGGCAGACAAAATGAACCGTA
ATMATAAATTTTTTWWTTTTTTWTTWTTWTTTTATTATTATTTTTTTTTT
WTCTCTTTTCCTTTTCCTTTTCACTTTTGCTTTGCACCTCTGCCTTTGCT
TTTCTTCAGATTTCGAGCGTTTTGAGTGATGTCCGATCTCCCTTTGTCTG
ACCACTCAGAAAGTATGAACAGATAAGGGAAAATGGATGCATGACCTGRA
AATGTATGCCATGGAGGTGGCGGACCCAGGAACAGCGYCAGCACGCATCA
TTTGAATAYGGCCTCTTCAACATACTTAATCYCTGTGTCGGTGAGCTTGG
TGCCGTCACCGTTAGCATCATTCTTAAGCGACAGCGACGCCGTCAGCACG
TCCACGTGCTTCTCGTTCGTCTAAGATGGTGAGCGCCTTCTCGAACAGAT
GCTCCTCATGTCCATGTCGTAACAAAGAAGTATCTATGCYGTCGGTTTGT
AGCTCAKGCAGTATGGCCTTGCCTTGTGTATCGTCTGCTTGATCCTTGAA
TCTGGTTGTTTTGATCTTGTCGTCCGGATCAGGATAAGAGGCCACTGAGG
CCAAAAGATCAACACACGATGTGCTGACACCAAGCGGCCATTAGATATCC
GACGGTAGGAAGATGACCTACGTGGTGATTATTCCATCTCAAACATACAG
CTAAAGCTGTATGTCTTTGTTTTTTCCCCAAATATGCTGCTTGCTGGCAG
GTAAATATGGGCGTTTAAAGCTTTTCCAGCTTTAACAAAAGATTGCTGCA
TGTGAGTATCATCATTCGCGGCATGTGTTCTGTAATGTTGGTCTGTTTTG
GGGTGTATAAGTAAGCCTTYCYGTAAGGCTTTTAGGCACCAAAGCTTGCW
GCTTCGTATTTGCGCAGGTTTGCTTGCTTCTCTGAACACCCCAACTACGC
AACAATTTCACGGCCGATTGTGCAGCTACTGCATGCTCGCTGCCTCTTAC
TGTTACTGCCGAGCCATTGCACAACCACCATCCTTGCCGCATCACCTTTG
TCATCCTTGCCCTTATCATTGAGCACAGCCGCCATTCTCCAAGMACTCGC
AYCTGACTGAGCAGATCATCACTGGTTTGTTTGTTTTKTTTTTTTTTTTT
TTTTTWTTTTTACGTGCACTTGTTGAAGGACCATGGACCGTGCCCCCTTC
CTCTTCCTCATTTTCATTTGAACTTTTTGCAGCCGCTGCTACTTTGAGCC
ACAGAGACCAGAGAGAGAAAGAGAAAACACCCATTGGAGACAACATCAAG
TTTCTTCTGGTCCTCTCCTTGGATATTAACTGCACCCTGAACCCCAATCA
AGTTGGAAATGTTGGCCCTCTGCAGCAGGGAGACGGTCGTGAGGACGACA
GCGTGGATTCGTTTGAGTTGGTTTGGGTGCGCAGAGCAGGATTACAGGAG
GGCGTGAGCATGGTTGCAGGCTGTTCTTGATCGAGATCCCCTTGTCACCT
GGATCTCTGCATGCATATATATATATGGCTGGTACTTGGCATGTCCCGTC
GTTTGCATGCATATATATATATATATATATATATATATATATATATATAT
TTTATTTGCTTGCTTATATATATATATATATATATTTTATTTGCTTGCTT
GTACATATATATATATTTTATTTGCTTGCTTGTCTTGTCATCCACATGCA
TGTATATATATATATGCATTTGTTCTTTGATGCCGTCCACTGTATGCATA
TATATATATATATGTTTGCTTGTCCCATCACTTGTCATCCGCATGCTGAC
TTTCCATATGTACTTGCATTTGTTCCTTTGGTGTGGCGTCCTCTGCATGC
ATATATATATATATATATACATATATATACATATATATATATATGTTTGC
TTGTCCCATCCCTTGTCATCCGCATGCTGACTTTCCATATATATATATAT
GCATTTGTTCCTTTGGCTGGCGTGGAGTCCTTTGCATGCATATATATATA
TATATATATATATATGTATTTGTTTCTATGTCCCGCCATCTGCATGCATA
TATATATATATATATATATATATATATATATTTGTTTGTCCCAGTCTGCA
CATATATAAAATGGGAACTTTAACGAAAAGCACCTGGTACTGTTCACTTT
AACGAAAAACCATATTTTTACACTAAAAAGTCAATCCTGGTACTATTCAT
TTTACTCTTTATTTTGTCCTTATCATTAAAACTCAAAGTTTTCAAGCCCT
TTTCATTAGTTTTCCTATATAAAATTTCTCATAATGTGCGCTCCTTCACT
GATGGATTTCTTTGTCGTAATGCTAGGGATCTTTAATTACGAAGCTTTCA
GAGGCGTGGTATTTGGAGTGAGCAGGGTGTGAGCATATTTGTGCCTTCTG
CTGCCTAGGGTTTGCACAAGGGACTGCAACGGGGTTTCGTTGTGTAGTGC
CTTTTGCTGCCGCTTGGAAGGRCWGTCTCGTAGCTACCCGCTTTGCCRTG
TTRCTGCTGATTTATTTATTTAWTTTTTTTTTCGAGGTCATGGTATTTTT
TAAGTGCTTTAAGGGCGGCACCCTTACCATTCTTGCGCAGGCCGGTGACT
TGCAAGACAGAGGAACGAYGTTGAAGCTTTACGAGCCACTGACCGGTCCT
AAAGCGCTTGCTCTTCCCGCGAAAGATAACTCCATGCATATTAAGTCGTG
GTCTTCCGAAGTATCTTGGGATGTGGTGGATTCTGTCCAAGCATATACGA
AGAAGAAGGCGCGCATCTCGAAGATTCTTATCTTGAATCCGTCGCACTAT
GCCGGTGACAATCATTCGGCCTCATTTAAGCTTCTTGGTGATCACATCCG
CATCGGAGCCAAGGCTTGGAATGGTACCTTGTCTACTGCTGGAGAGGCCA
TTTTTGATGAGTTTTATTGGGAGTGGCTCGAAGATGTCTTAAGCCGATCT
AAGGATGTGCTCACTAAGGTGGACCTTTACCACGCTGTGTATGCGTCTTT
GTTTAGTTACGATCGCCATCCTTCCGTTATTCGTGCGTTCTTAGAGTGTT
GGTGTTCGGCCACCAACACACTTCACACAGCRCAAGGGGAGATGTCAATT
TCACTTTGGGATCTTCACAGGATAGGAGGTTTGCCGATCCAAKGCAAGTT
TTACGACGAGGTTGTTCCCAGCGCAGAGGACCTTTCTCTTTGCAATAACC
GAGGATTGCCTGCCAGYTGCCGCTATTTGTTTTGGGCGTATCACAGGCTT
TTCCAGGATGCTCGAGGTAAATCAGGCGTGAGGATTTCCTCATGGATCCG
ATTCTGGTACTGGGAGGCCATGAGGTATAAGAAGCCTTTGAAGARAATTG
GTCGTAACAAGACCACTAGGCCAAAGGGCGACTCAGACCCGTCCGGTGTT
ATTGGYGCAACCAGGCGTCGCTCTTCTGACGAGTTGAGAGCATTTGAGGA
TCTYGGCATAGCACCAGAGCATGTGGAKGAGTCTTACCTGGCTGCTTTCT
TAGCTTGTTGGCTTTGTAAAKTTGTTTTCCCCRCAGGCGACGTCAACTTA
GTTCGYCCTGGAGTTTTCAAAGTTGCTAGCAAGATGGCTGCAGGTGARTC
TTTTAGCCTCGCTATTCCGGTCTTAGCCARCATTTACAAYGGCTTGAGCA
TGGTTTCTGACKCGGCAAGCACTGAAGATCGTGCTGCGGTGCTTCCTTAC
CACTATGTGTATGGTTGGTTGGGTGAATATTTTGGCACTCATTTTTCTCT
GTCGACTCTGGATAAGTCAAGACCTTCCTCATCGACYGGAGCCAAGCTAG
GGCMTTTGATGACGAAGTATTCTGGTGTGCTCTCCGCKAAGAGCCTTGAC
RATTTGYAAGCGCGAGCGCTKTTTAAGAGTTGTGAAGACTTGAGGATGGA
CCCCTTAGCGAGAGTTGGCTCGGTGCGKCGARGCATCGTAGACAACTCGC
ATCTCYGCTTCTCGGACTTGTCTTATCTTATAAGCCTTCGCTCGGGGTTT
GTTTCTTTGCGGCAAGAAGACCGATGTATCATCCAGTCATATAGCCCCCA
CCGTTTCAGCAGGCAATTTGGTTTTGTCCAAAGCGAGCCAGGCAAGTTGA
AGGAAAGGGAACCC
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