F3H, HM854009.1-F3H.m1 (mRNA) Fragaria virginiana

Transcript Overview
NameF3H
Unique NameHM854009.1-F3H.m1
TypemRNA
OrganismFragaria virginiana ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
F3HF3HFragaria virginianagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
HM854009.1-F3H.m1-cds1HM854009.1-F3H.m1-cds1Fragaria virginianaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
F3HHM854009.1-F3H.p1Fragaria virginianapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI332348709
nuccoreHM854009.1
Alignments
Feature NameTypeLocationAnalysis
HM854009 region HM854009:1..1539+ NCBI Rosaceae gene and mRNA sequences
LG5 chromosome LG5:7611689..7614828+ Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation
Properties
Property NameValue
Productflavonoid 3'-hydroxylase
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>HM854009.1-F3H.m1 ID=HM854009.1-F3H.m1|Name=F3H|organism=Fragaria virginiana|type=mRNA|length=1539bp
atgtttctcatagcagcgatcacccttctcgtcgccgtggttctattccg
gcttcttttctccggcaaatcccaacgtcgctcgcttcctctccctcctg
gccccaaaccatggcctgtcgtcgggaacttgcctcacttgggccctttt
ccgcaccactctctcgcggagttggcgcagaaacacgggcccctcatgca
cctccgcctcggttatgttgacgtagtggtggcggcatcagcatccgtag
cgtctcagttcttgaagactcacgacgctaacttctccagccggccaccc
aactcaggcgccaagtacatggcctacaactaccaggacctcgtgttcag
gccctacagtccacggtggcgccagttccggaagatcagctcagtccatc
ttttctccggcaaggccttggatgaccttaaacacgtccggcaggaggag
gtagctgtgctagcgcatgccttagcaaatgcagggtcaaaggtagtgaa
cctggcgcaactactcaacttgtgcacggtcaacgccctagggcgagtga
tggtagggcggagggttttcggcgacggcagcggcagcgacgatccgaag
gcggacgagttcaagtcaatggtggtggagatgatggtgttggcaggagt
gcccaacataggtgacttcattccctgccttgagtggcttgacttgcaag
gtgtggcgtccaagatgaagaagctccacaagagattcgacgacttcttg
atggccattgtcgaggatcacaagaagagcaccggcacggcgacgcacgt
cgacatgttgaccactctgctctccctccaggaagacgccgacggcgaag
gtgccaagctcaccgacaccgagatcaaggctttgcttttgaacatgttc
acagctggcactgatacgtcatcgagcactgtggaatgggcattggccga
acttattaagcaccctcatatgttagcgcgactccgaaaagagttggacg
atgttgttggacatgaccgactcgtgacagaaccggacctacccaagctc
acctacatccaggccgttatcaaggagacgttccggcttcacccgtccac
tcctctctcattgcctcgtatggcggccgagagttgtgaaatcaacgggt
accacatcccgaagggttccacattgttagtcaatatatgggccatatcg
cgtgacccggctgaatgggccgaaccgttggagttcaggcccgaaaggtt
cttaccgggcagcgaaaagcctaatgttgatattagaggaaatgattttg
aagtcatacccttcggtgctgggagaagaatatgtgctgggatgagcttg
ggcctccgtatggtcagtttgatgactgcaacattggtccatgcgtttga
ttggaccttggcggatgggacacctgagaagttaaacatggatgaagcat
ttgggctcactctacaacgagctgcaccgttaatgatgcacccgcgcacc
cggctagccccacatgcttataaaacttcatcatcttaa
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protein sequence of F3H

>HM854009.1-F3H.p1 ID=HM854009.1-F3H.p1|Name=F3H|organism=Fragaria virginiana|type=polypeptide|length=512bp
MFLIAAITLLVAVVLFRLLFSGKSQRRSLPLPPGPKPWPVVGNLPHLGPF
PHHSLAELAQKHGPLMHLRLGYVDVVVAASASVASQFLKTHDANFSSRPP
NSGAKYMAYNYQDLVFRPYSPRWRQFRKISSVHLFSGKALDDLKHVRQEE
VAVLAHALANAGSKVVNLAQLLNLCTVNALGRVMVGRRVFGDGSGSDDPK
ADEFKSMVVEMMVLAGVPNIGDFIPCLEWLDLQGVASKMKKLHKRFDDFL
MAIVEDHKKSTGTATHVDMLTTLLSLQEDADGEGAKLTDTEIKALLLNMF
TAGTDTSSSTVEWALAELIKHPHMLARLRKELDDVVGHDRLVTEPDLPKL
TYIQAVIKETFRLHPSTPLSLPRMAAESCEINGYHIPKGSTLLVNIWAIS
RDPAEWAEPLEFRPERFLPGSEKPNVDIRGNDFEVIPFGAGRRICAGMSL
GLRMVSLMTATLVHAFDWTLADGTPEKLNMDEAFGLTLQRAAPLMMHPRT
RLAPHAYKTSSS
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mRNA from alignment at HM854009:1..1539+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>HM854009.1-F3H.m1 ID=HM854009.1-F3H.m1|Name=F3H|organism=Fragaria virginiana|type=mRNA|length=1539bp|location=Sequence derived from alignment at HM854009:1..1539+ (Fragaria virginiana)
atgtttctcatagcagcgatcacccttctcgtcgccgtggttctattccg gcttcttttctccggcaaatcccaacgtcgctcgcttcctctccctcctg gccccaaaccatggcctgtcgtcgggaacttgcctcacttgggccctttt ccgcaccactctctcgcggagttggcgcagaaacacgggcccctcatgca cctccgcctcggttatgttgacgtagtggtggcggcatcagcatccgtag cgtctcagttcttgaagactcacgacgctaacttctccagccggccaccc aactcaggcgccaagtacatggcctacaactaccaggacctcgtgttcag gccctacagtccacggtggcgccagttccggaagatcagctcagtccatc ttttctccggcaaggccttggatgaccttaaacacgtccggcaggaggag gtagctgtgctagcgcatgccttagcaaatgcagggtcaaaggtagtgaa cctggcgcaactactcaacttgtgcacggtcaacgccctagggcgagtga tggtagggcggagggttttcggcgacggcagcggcagcgacgatccgaag gcggacgagttcaagtcaatggtggtggagatgatggtgttggcaggagt gcccaacataggtgacttcattccctgccttgagtggcttgacttgcaag gtgtggcgtccaagatgaagaagctccacaagagattcgacgacttcttg atggccattgtcgaggatcacaagaagagcaccggcacggcgacgcacgt cgacatgttgaccactctgctctccctccaggaagacgccgacggcgaag gtgccaagctcaccgacaccgagatcaaggctttgcttttgaacatgttc acagctggcactgatacgtcatcgagcactgtggaatgggcattggccga acttattaagcaccctcatatgttagcgcgactccgaaaagagttggacg atgttgttggacatgaccgactcgtgacagaaccggacctacccaagctc acctacatccaggccgttatcaaggagacgttccggcttcacccgtccac tcctctctcattgcctcgtatggcggccgagagttgtgaaatcaacgggt accacatcccgaagggttccacattgttagtcaatatatgggccatatcg cgtgacccggctgaatgggccgaaccgttggagttcaggcccgaaaggtt cttaccgggcagcgaaaagcctaatgttgatattagaggaaatgattttg aagtcatacccttcggtgctgggagaagaatatgtgctgggatgagcttg ggcctccgtatggtcagtttgatgactgcaacattggtccatgcgtttga ttggaccttggcggatgggacacctgagaagttaaacatggatgaagcat ttgggctcactctacaacgagctgcaccgttaatgatgcacccgcgcacc cggctagccccacatgcttataaaacttcatcatcttaa
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Coding sequence (CDS) from alignment at HM854009:1..1539+

>HM854009.1-F3H.m1 ID=HM854009.1-F3H.m1|Name=F3H|organism=Fragaria virginiana|type=CDS|length=1539bp|location=Sequence derived from alignment at HM854009:1..1539+ (Fragaria virginiana)
atgtttctcatagcagcgatcacccttctcgtcgccgtggttctattccg
gcttcttttctccggcaaatcccaacgtcgctcgcttcctctccctcctg
gccccaaaccatggcctgtcgtcgggaacttgcctcacttgggccctttt
ccgcaccactctctcgcggagttggcgcagaaacacgggcccctcatgca
cctccgcctcggttatgttgacgtagtggtggcggcatcagcatccgtag
cgtctcagttcttgaagactcacgacgctaacttctccagccggccaccc
aactcaggcgccaagtacatggcctacaactaccaggacctcgtgttcag
gccctacagtccacggtggcgccagttccggaagatcagctcagtccatc
ttttctccggcaaggccttggatgaccttaaacacgtccggcaggaggag
gtagctgtgctagcgcatgccttagcaaatgcagggtcaaaggtagtgaa
cctggcgcaactactcaacttgtgcacggtcaacgccctagggcgagtga
tggtagggcggagggttttcggcgacggcagcggcagcgacgatccgaag
gcggacgagttcaagtcaatggtggtggagatgatggtgttggcaggagt
gcccaacataggtgacttcattccctgccttgagtggcttgacttgcaag
gtgtggcgtccaagatgaagaagctccacaagagattcgacgacttcttg
atggccattgtcgaggatcacaagaagagcaccggcacggcgacgcacgt
cgacatgttgaccactctgctctccctccaggaagacgccgacggcgaag
gtgccaagctcaccgacaccgagatcaaggctttgcttttgaacatgttc
acagctggcactgatacgtcatcgagcactgtggaatgggcattggccga
acttattaagcaccctcatatgttagcgcgactccgaaaagagttggacg
atgttgttggacatgaccgactcgtgacagaaccggacctacccaagctc
acctacatccaggccgttatcaaggagacgttccggcttcacccgtccac
tcctctctcattgcctcgtatggcggccgagagttgtgaaatcaacgggt
accacatcccgaagggttccacattgttagtcaatatatgggccatatcg
cgtgacccggctgaatgggccgaaccgttggagttcaggcccgaaaggtt
cttaccgggcagcgaaaagcctaatgttgatattagaggaaatgattttg
aagtcatacccttcggtgctgggagaagaatatgtgctgggatgagcttg
ggcctccgtatggtcagtttgatgactgcaacattggtccatgcgtttga
ttggaccttggcggatgggacacctgagaagttaaacatggatgaagcat
ttgggctcactctacaacgagctgcaccgttaatgatgcacccgcgcacc
cggctagccccacatgcttataaaacttcatcatcttaa
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