C4H, KF663548.1-C4H.m1 (mRNA) Pyrus x bretschneideri

Transcript Overview
NameC4H
Unique NameKF663548.1-C4H.m1
TypemRNA
OrganismPyrus x bretschneideri ()
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
C4HC4HPyrus x bretschneiderigene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KF663548.1-C4H.m1-cds1KF663548.1-C4H.m1-cds1Pyrus x bretschneideriCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
C4HKF663548.1-C4H.p1Pyrus x bretschneideripolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI563407350
nuccoreKF663548.1
Alignments
Feature NameTypeLocationAnalysis
KF663548 region KF663548:86..1600+ NCBI Rosaceae gene and mRNA sequences
scaffold00442 supercontig scaffold00442:28348..32677+ Pyrus communis Genome v1.0 Draft Assembly & Annotation
Properties
Property NameValue
Productcinnamate 4-hydroxylase
Sourcegenbank
Genbank noteC4H
Sequences
The following sequences are available for this feature:

mRNA sequence

>KF663548.1-C4H.m1 ID=KF663548.1-C4H.m1|Name=C4H|organism=Pyrus x bretschneideri|type=mRNA|length=1515bp
atggacctcctcctcctggaaaagacccttctgggtctcttcgtcgcggt
catcgttgccatcaccatttcaaaactccgcggcaagaaattcaggctcc
cgccgggtcccatccccgtacccgtattcggaaactggctccaggtcggt
gacgacctcaaccaccgcaatctcaccgacatggccaagaaattcggcga
ctgcttcctcctccgcatggggcagcgcaacctcgtcgttgtctcctcgc
cggagctcgccaaggaggtcctccacactcagggagtcgaattcgggtcg
aggacccgaaacgtcgtctttgatattttcaccggtgaaggccaggacat
ggtgttcaccgtctacggcgagcactggcggaaaatgcggcgtatcatga
ccgtccccttcttcaccaacaaggttgtccagcagtaccgctacggatgg
gagtcggaggcggcggcggtcgtcgaggatgtgaaaaagcatcccgaggc
ggcgaccagcggaatggtgctgcggaggcggctgcagctgatgatgtaca
acaacatgtacagaatcatgttcgaccggcgattcgagagcgaggaggat
cccctgttcgtgaagctcaaggcgctgaatggggagaggagccgattggc
gcagagcttcgactacaactacggcgattttatcccgatcttaaggccct
ttttgagagggtatttgaagatctgcaaggaagtgaaggagaagaggatc
cagctgtttaaggactatttcgtggacgagaggaagaaactttcgagcac
aaagccgacaacaaacgaagggttgaaatgcgccatcgaccacatcctcg
acgcgcagcagaaaggagaaatcaacgaggacaacgttctctacatcgtc
gagaacatcaacgttgctgctattgaaaccacattgtggtcgatcgagtg
gggaattgccgagctagtgaaccatcccgaaatccagaagaagctgagga
atgaactcgacacagtccttggccgcggagttcagatcacagagcccgac
gttcataaacttccctacctgcaagccgtggtcaaggagactctccgact
tcgcatggcaatcccactccttgtcccccacatgaacctccaggatgcca
agctcggtgggtttgatattccggcggagagcaagatactggtgaatgct
tggtggttggcaaacaaccctgccctgtggaagaagccagaagagtttag
gcctgagaggtttttggaggaggagtcgaaggtggaggctaacgggaacg
acttcaggtatctcccgtttggtgttgggaggagaagttgtcctgggatt
attttggccctgccaatcctgggcattacaattggacgtttagttcagaa
cttcgagcttctgcctccgccaggacagtccaagctcgacacctcggaga
aaggtggacagttcagcctgcacatcctgaagcactccaccattgtgatg
aagccgatggcgtag
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protein sequence of C4H

>KF663548.1-C4H.p1 ID=KF663548.1-C4H.p1|Name=C4H|organism=Pyrus x bretschneideri|type=polypeptide|length=504bp
MDLLLLEKTLLGLFVAVIVAITISKLRGKKFRLPPGPIPVPVFGNWLQVG
DDLNHRNLTDMAKKFGDCFLLRMGQRNLVVVSSPELAKEVLHTQGVEFGS
RTRNVVFDIFTGEGQDMVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRYGW
ESEAAAVVEDVKKHPEAATSGMVLRRRLQLMMYNNMYRIMFDRRFESEED
PLFVKLKALNGERSRLAQSFDYNYGDFIPILRPFLRGYLKICKEVKEKRI
QLFKDYFVDERKKLSSTKPTTNEGLKCAIDHILDAQQKGEINEDNVLYIV
ENINVAAIETTLWSIEWGIAELVNHPEIQKKLRNELDTVLGRGVQITEPD
VHKLPYLQAVVKETLRLRMAIPLLVPHMNLQDAKLGGFDIPAESKILVNA
WWLANNPALWKKPEEFRPERFLEEESKVEANGNDFRYLPFGVGRRSCPGI
ILALPILGITIGRLVQNFELLPPPGQSKLDTSEKGGQFSLHILKHSTIVM
KPMA
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mRNA from alignment at KF663548:86..1600+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KF663548.1-C4H.m1 ID=KF663548.1-C4H.m1|Name=C4H|organism=Pyrus x bretschneideri|type=mRNA|length=1515bp|location=Sequence derived from alignment at KF663548:86..1600+ (Pyrus x bretschneideri)
atggacctcctcctcctggaaaagacccttctgggtctcttcgtcgcggt catcgttgccatcaccatttcaaaactccgcggcaagaaattcaggctcc cgccgggtcccatccccgtacccgtattcggaaactggctccaggtcggt gacgacctcaaccaccgcaatctcaccgacatggccaagaaattcggcga ctgcttcctcctccgcatggggcagcgcaacctcgtcgttgtctcctcgc cggagctcgccaaggaggtcctccacactcagggagtcgaattcgggtcg aggacccgaaacgtcgtctttgatattttcaccggtgaaggccaggacat ggtgttcaccgtctacggcgagcactggcggaaaatgcggcgtatcatga ccgtccccttcttcaccaacaaggttgtccagcagtaccgctacggatgg gagtcggaggcggcggcggtcgtcgaggatgtgaaaaagcatcccgaggc ggcgaccagcggaatggtgctgcggaggcggctgcagctgatgatgtaca acaacatgtacagaatcatgttcgaccggcgattcgagagcgaggaggat cccctgttcgtgaagctcaaggcgctgaatggggagaggagccgattggc gcagagcttcgactacaactacggcgattttatcccgatcttaaggccct ttttgagagggtatttgaagatctgcaaggaagtgaaggagaagaggatc cagctgtttaaggactatttcgtggacgagaggaagaaactttcgagcac aaagccgacaacaaacgaagggttgaaatgcgccatcgaccacatcctcg acgcgcagcagaaaggagaaatcaacgaggacaacgttctctacatcgtc gagaacatcaacgttgctgctattgaaaccacattgtggtcgatcgagtg gggaattgccgagctagtgaaccatcccgaaatccagaagaagctgagga atgaactcgacacagtccttggccgcggagttcagatcacagagcccgac gttcataaacttccctacctgcaagccgtggtcaaggagactctccgact tcgcatggcaatcccactccttgtcccccacatgaacctccaggatgcca agctcggtgggtttgatattccggcggagagcaagatactggtgaatgct tggtggttggcaaacaaccctgccctgtggaagaagccagaagagtttag gcctgagaggtttttggaggaggagtcgaaggtggaggctaacgggaacg acttcaggtatctcccgtttggtgttgggaggagaagttgtcctgggatt attttggccctgccaatcctgggcattacaattggacgtttagttcagaa cttcgagcttctgcctccgccaggacagtccaagctcgacacctcggaga aaggtggacagttcagcctgcacatcctgaagcactccaccattgtgatg aagccgatggcgtag
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Coding sequence (CDS) from alignment at KF663548:86..1600+

>KF663548.1-C4H.m1 ID=KF663548.1-C4H.m1|Name=C4H|organism=Pyrus x bretschneideri|type=CDS|length=1515bp|location=Sequence derived from alignment at KF663548:86..1600+ (Pyrus x bretschneideri)
atggacctcctcctcctggaaaagacccttctgggtctcttcgtcgcggt
catcgttgccatcaccatttcaaaactccgcggcaagaaattcaggctcc
cgccgggtcccatccccgtacccgtattcggaaactggctccaggtcggt
gacgacctcaaccaccgcaatctcaccgacatggccaagaaattcggcga
ctgcttcctcctccgcatggggcagcgcaacctcgtcgttgtctcctcgc
cggagctcgccaaggaggtcctccacactcagggagtcgaattcgggtcg
aggacccgaaacgtcgtctttgatattttcaccggtgaaggccaggacat
ggtgttcaccgtctacggcgagcactggcggaaaatgcggcgtatcatga
ccgtccccttcttcaccaacaaggttgtccagcagtaccgctacggatgg
gagtcggaggcggcggcggtcgtcgaggatgtgaaaaagcatcccgaggc
ggcgaccagcggaatggtgctgcggaggcggctgcagctgatgatgtaca
acaacatgtacagaatcatgttcgaccggcgattcgagagcgaggaggat
cccctgttcgtgaagctcaaggcgctgaatggggagaggagccgattggc
gcagagcttcgactacaactacggcgattttatcccgatcttaaggccct
ttttgagagggtatttgaagatctgcaaggaagtgaaggagaagaggatc
cagctgtttaaggactatttcgtggacgagaggaagaaactttcgagcac
aaagccgacaacaaacgaagggttgaaatgcgccatcgaccacatcctcg
acgcgcagcagaaaggagaaatcaacgaggacaacgttctctacatcgtc
gagaacatcaacgttgctgctattgaaaccacattgtggtcgatcgagtg
gggaattgccgagctagtgaaccatcccgaaatccagaagaagctgagga
atgaactcgacacagtccttggccgcggagttcagatcacagagcccgac
gttcataaacttccctacctgcaagccgtggtcaaggagactctccgact
tcgcatggcaatcccactccttgtcccccacatgaacctccaggatgcca
agctcggtgggtttgatattccggcggagagcaagatactggtgaatgct
tggtggttggcaaacaaccctgccctgtggaagaagccagaagagtttag
gcctgagaggtttttggaggaggagtcgaaggtggaggctaacgggaacg
acttcaggtatctcccgtttggtgttgggaggagaagttgtcctgggatt
attttggccctgccaatcctgggcattacaattggacgtttagttcagaa
cttcgagcttctgcctccgccaggacagtccaagctcgacacctcggaga
aaggtggacagttcagcctgcacatcctgaagcactccaccattgtgatg
aagccgatggcgtag
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