CBF, KC885952.1-CBF.m1 (mRNA) Prunus persica

Transcript Overview
NameCBF
Unique NameKC885952.1-CBF.m1
TypemRNA
OrganismPrunus persica (Peach)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
CBFCBFPrunus persicagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KC885952.1-CBF.m1-cds1KC885952.1-CBF.m1-cds1Prunus persicaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBFKC885952.1-CBF.p1Prunus persicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI527461742
nuccoreKC885952.1
Alignments
Feature NameTypeLocationAnalysis
KC885952 region KC885952:122..811+ NCBI Rosaceae gene and mRNA sequences
scaffold_2 supercontig scaffold_2:24801245..24801934- Prunus persica Whole Genome v1.0 Assembly & Annotation
Properties
Property NameValue
ProductC-repeat binding factor
Sourcegenbank
Genbank noteAP2 domain transcription activator
Sequences
The following sequences are available for this feature:

mRNA sequence

>KC885952.1-CBF.m1 ID=KC885952.1-CBF.m1|Name=CBF|organism=Prunus persica|type=mRNA|length=690bp
atggatggtttttgtccttactacgtcgacccacaaacttgtggcgcctc
ctccgaggtaccggaatcttcgtccgcttccgacaacagcagtgctcgcc
ctgtatccgtgaacttttcggacgaggagctcctgctggcgtccacttat
cccaagaagcgggccggtcggaagaagttcaaggagactcggcaccccgt
gtaccgcggtgtcaggagaaggaactccgggaagtgggtttgcgaggtgc
gggagcccaacaagaagaccaggatttggctcgggactttccccacagcc
gaaatggcagcgcgagctcatgacgtggcggccatcaagctcagaggtcg
gtctgcttgcttgaactttgccgactccgcgtggcggctgcctgtcccgg
cttcagcaaacgccaaggatattcaaaccacagcttccgaggctgctgag
gcgtttcggccacctgcggaggggtcggttgaggtttctggagcttcggc
ggtggccgcgtcagaaagcaagtcagcatcggaacaagtgttttatatgg
atgaggaggctgtttttgggatgccaggactcctcgcaaatatggccgaa
gggatgctgttgtctccacctctttacaccgaggatgacgatgacgtgga
attttatgctgacgtgccactatggagttattcgatttaa
back to top

protein sequence of CBF

>KC885952.1-CBF.p1 ID=KC885952.1-CBF.p1|Name=CBF|organism=Prunus persica|type=polypeptide|length=229bp
MDGFCPYYVDPQTCGASSEVPESSSASDNSSARPVSVNFSDEELLLASTY
PKKRAGRKKFKETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTA
EMAARAHDVAAIKLRGRSACLNFADSAWRLPVPASANAKDIQTTASEAAE
AFRPPAEGSVEVSGASAVAASESKSASEQVFYMDEEAVFGMPGLLANMAE
GMLLSPPLYTEDDDDVEFYADVPLWSYSI
back to top

mRNA from alignment at KC885952:122..811+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KC885952.1-CBF.m1 ID=KC885952.1-CBF.m1|Name=CBF|organism=Prunus persica|type=mRNA|length=690bp|location=Sequence derived from alignment at KC885952:122..811+ (Prunus persica)
atggatggtttttgtccttactacgtcgacccacaaacttgtggcgcctc ctccgaggtaccggaatcttcgtccgcttccgacaacagcagtgctcgcc ctgtatccgtgaacttttcggacgaggagctcctgctggcgtccacttat cccaagaagcgggccggtcggaagaagttcaaggagactcggcaccccgt gtaccgcggtgtcaggagaaggaactccgggaagtgggtttgcgaggtgc gggagcccaacaagaagaccaggatttggctcgggactttccccacagcc gaaatggcagcgcgagctcatgacgtggcggccatcaagctcagaggtcg gtctgcttgcttgaactttgccgactccgcgtggcggctgcctgtcccgg cttcagcaaacgccaaggatattcaaaccacagcttccgaggctgctgag gcgtttcggccacctgcggaggggtcggttgaggtttctggagcttcggc ggtggccgcgtcagaaagcaagtcagcatcggaacaagtgttttatatgg atgaggaggctgtttttgggatgccaggactcctcgcaaatatggccgaa gggatgctgttgtctccacctctttacaccgaggatgacgatgacgtgga attttatgctgacgtgccactatggagttattcgatttaa
back to top

Coding sequence (CDS) from alignment at KC885952:122..811+

>KC885952.1-CBF.m1 ID=KC885952.1-CBF.m1|Name=CBF|organism=Prunus persica|type=CDS|length=690bp|location=Sequence derived from alignment at KC885952:122..811+ (Prunus persica)
atggatggtttttgtccttactacgtcgacccacaaacttgtggcgcctc
ctccgaggtaccggaatcttcgtccgcttccgacaacagcagtgctcgcc
ctgtatccgtgaacttttcggacgaggagctcctgctggcgtccacttat
cccaagaagcgggccggtcggaagaagttcaaggagactcggcaccccgt
gtaccgcggtgtcaggagaaggaactccgggaagtgggtttgcgaggtgc
gggagcccaacaagaagaccaggatttggctcgggactttccccacagcc
gaaatggcagcgcgagctcatgacgtggcggccatcaagctcagaggtcg
gtctgcttgcttgaactttgccgactccgcgtggcggctgcctgtcccgg
cttcagcaaacgccaaggatattcaaaccacagcttccgaggctgctgag
gcgtttcggccacctgcggaggggtcggttgaggtttctggagcttcggc
ggtggccgcgtcagaaagcaagtcagcatcggaacaagtgttttatatgg
atgaggaggctgtttttgggatgccaggactcctcgcaaatatggccgaa
gggatgctgttgtctccacctctttacaccgaggatgacgatgacgtgga
attttatgctgacgtgccactatggagttattcgatttaa
back to top