CYP, JN979371.1-CYP.m1 (mRNA) Fragaria x ananassa

Transcript Overview
NameCYP
Unique NameJN979371.1-CYP.m1
TypemRNA
OrganismFragaria x ananassa (Strawberry)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
CYPCYPFragaria x ananassagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JN979371.1-CYP.m1-cds1JN979371.1-CYP.m1-cds1Fragaria x ananassaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CYPJN979371.1-CYP.p1Fragaria x ananassapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI498666906
nuccoreJN979371.1
Alignments
Feature NameTypeLocationAnalysis
JN979371 region JN979371:69..1133+ NCBI Rosaceae gene and mRNA sequences
LG6 chromosome LG6:35085957..35088200- Fragaria vesca Whole Genome v1.0 (build 8) Assembly & Annotation
Properties
Property NameValue
Productcysteine protease
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>JN979371.1-CYP.m1 ID=JN979371.1-CYP.m1|Name=CYP|organism=Fragaria x ananassa|type=mRNA|length=1065bp
atgtcgacctccatgaccctaaccctcttcaccctcctcttcctctcctt
caccctctctcacgcctccgacctccgcaccgatgccgaggtccgggagc
tctaccagaactggctcgtcaagcaccagaaagtctacaacggcatcgga
gaggaggagaccaggttccagatcttcaaggacaacttgaagttcgtcga
tgaacacaacgctgagagcaggtcgtacaaggttggcatgaacgccttcg
ccgacttgaccaaccaggagtaccgtgctaggtttctcggaacccgccct
gaccctaagaggagggtcatgaaggccaagaaccccagcctcaggtacgt
tgtccgccccgacgacaagttgccggaatccgtcgactggagagctttgg
gggctgttaacccgatcaaaaaccaaggcagctgcggaagttgctgggca
ttttcaactgtggctgcagtggaaggcattaacaagatagccacaggaga
actagtctctctttcagagcaagagcttgttgactgtgacaggaagtaca
acgctggctgcaacggaggccttatggactatgctttcgagttcatcatc
aaaaacggtggcatggacaccgaatcagactacccttacaaagcagtcaa
ccaacagtgtgacgcttctttggagaacaacaaggttgttaccattgatg
gttacgaagatgttccagctttcaacgaggaggctttgaagaaagctgta
gcacatcaacctgtaagtgttgccattgaagctggtggcgttgctcttca
gctctatgactcgggtgtgtttaccggtgaatgtggatcagcacttgatc
atggtgtggttgctgttggttatggcactgagaatggtgtggactactgg
ctggtgaggaactcatggggaaccaactggggtgagggtggatatttcaa
gatcgagcgcaatgtgaagagcacatatactggcaagtgtggtattgcca
tggaggcttcttacccgaccaaggatagtgcacagaacccaatccagatg
gtcaccagcatgtga
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protein sequence of CYP

>JN979371.1-CYP.p1 ID=JN979371.1-CYP.p1|Name=CYP|organism=Fragaria x ananassa|type=polypeptide|length=354bp
MSTSMTLTLFTLLFLSFTLSHASDLRTDAEVRELYQNWLVKHQKVYNGIG
EEETRFQIFKDNLKFVDEHNAESRSYKVGMNAFADLTNQEYRARFLGTRP
DPKRRVMKAKNPSLRYVVRPDDKLPESVDWRALGAVNPIKNQGSCGSCWA
FSTVAAVEGINKIATGELVSLSEQELVDCDRKYNAGCNGGLMDYAFEFII
KNGGMDTESDYPYKAVNQQCDASLENNKVVTIDGYEDVPAFNEEALKKAV
AHQPVSVAIEAGGVALQLYDSGVFTGECGSALDHGVVAVGYGTENGVDYW
LVRNSWGTNWGEGGYFKIERNVKSTYTGKCGIAMEASYPTKDSAQNPIQM
VTSM
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mRNA from alignment at JN979371:69..1133+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JN979371.1-CYP.m1 ID=JN979371.1-CYP.m1|Name=CYP|organism=Fragaria x ananassa|type=mRNA|length=1065bp|location=Sequence derived from alignment at JN979371:69..1133+ (Fragaria x ananassa)
atgtcgacctccatgaccctaaccctcttcaccctcctcttcctctcctt caccctctctcacgcctccgacctccgcaccgatgccgaggtccgggagc tctaccagaactggctcgtcaagcaccagaaagtctacaacggcatcgga gaggaggagaccaggttccagatcttcaaggacaacttgaagttcgtcga tgaacacaacgctgagagcaggtcgtacaaggttggcatgaacgccttcg ccgacttgaccaaccaggagtaccgtgctaggtttctcggaacccgccct gaccctaagaggagggtcatgaaggccaagaaccccagcctcaggtacgt tgtccgccccgacgacaagttgccggaatccgtcgactggagagctttgg gggctgttaacccgatcaaaaaccaaggcagctgcggaagttgctgggca ttttcaactgtggctgcagtggaaggcattaacaagatagccacaggaga actagtctctctttcagagcaagagcttgttgactgtgacaggaagtaca acgctggctgcaacggaggccttatggactatgctttcgagttcatcatc aaaaacggtggcatggacaccgaatcagactacccttacaaagcagtcaa ccaacagtgtgacgcttctttggagaacaacaaggttgttaccattgatg gttacgaagatgttccagctttcaacgaggaggctttgaagaaagctgta gcacatcaacctgtaagtgttgccattgaagctggtggcgttgctcttca gctctatgactcgggtgtgtttaccggtgaatgtggatcagcacttgatc atggtgtggttgctgttggttatggcactgagaatggtgtggactactgg ctggtgaggaactcatggggaaccaactggggtgagggtggatatttcaa gatcgagcgcaatgtgaagagcacatatactggcaagtgtggtattgcca tggaggcttcttacccgaccaaggatagtgcacagaacccaatccagatg gtcaccagcatgtga
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Coding sequence (CDS) from alignment at JN979371:69..1133+

>JN979371.1-CYP.m1 ID=JN979371.1-CYP.m1|Name=CYP|organism=Fragaria x ananassa|type=CDS|length=1065bp|location=Sequence derived from alignment at JN979371:69..1133+ (Fragaria x ananassa)
atgtcgacctccatgaccctaaccctcttcaccctcctcttcctctcctt
caccctctctcacgcctccgacctccgcaccgatgccgaggtccgggagc
tctaccagaactggctcgtcaagcaccagaaagtctacaacggcatcgga
gaggaggagaccaggttccagatcttcaaggacaacttgaagttcgtcga
tgaacacaacgctgagagcaggtcgtacaaggttggcatgaacgccttcg
ccgacttgaccaaccaggagtaccgtgctaggtttctcggaacccgccct
gaccctaagaggagggtcatgaaggccaagaaccccagcctcaggtacgt
tgtccgccccgacgacaagttgccggaatccgtcgactggagagctttgg
gggctgttaacccgatcaaaaaccaaggcagctgcggaagttgctgggca
ttttcaactgtggctgcagtggaaggcattaacaagatagccacaggaga
actagtctctctttcagagcaagagcttgttgactgtgacaggaagtaca
acgctggctgcaacggaggccttatggactatgctttcgagttcatcatc
aaaaacggtggcatggacaccgaatcagactacccttacaaagcagtcaa
ccaacagtgtgacgcttctttggagaacaacaaggttgttaccattgatg
gttacgaagatgttccagctttcaacgaggaggctttgaagaaagctgta
gcacatcaacctgtaagtgttgccattgaagctggtggcgttgctcttca
gctctatgactcgggtgtgtttaccggtgaatgtggatcagcacttgatc
atggtgtggttgctgttggttatggcactgagaatggtgtggactactgg
ctggtgaggaactcatggggaaccaactggggtgagggtggatatttcaa
gatcgagcgcaatgtgaagagcacatatactggcaagtgtggtattgcca
tggaggcttcttacccgaccaaggatagtgcacagaacccaatccagatg
gtcaccagcatgtga
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