CBF, KC543500.1-CBF.m1 (mRNA) Prunus persica

Transcript Overview
NameCBF
Unique NameKC543500.1-CBF.m1
TypemRNA
OrganismPrunus persica (Peach)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
CBFCBFPrunus persicagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KC543500.1-CBF.m1-cds1KC543500.1-CBF.m1-cds1Prunus persicaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBFKC543500.1-CBF.p1Prunus persicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI488468902
nuccoreKC543500.1
Alignments
Feature NameTypeLocationAnalysis
KC543500 region KC543500:1..699+ NCBI Rosaceae gene and mRNA sequences
scaffold_5 supercontig scaffold_5:10060832..10061530- Prunus persica Whole Genome v1.0 Assembly & Annotation
Properties
Property NameValue
ProductCBF/DREB 4
Sourcegenbank
Genbank noteAP2/ERF transcription factor family; low temperature response pathway
Sequences
The following sequences are available for this feature:

mRNA sequence

>KC543500.1-CBF.m1 ID=KC543500.1-CBF.m1|Name=CBF|organism=Prunus persica|type=mRNA|length=699bp
atggatttgatctacagccaggtctctgatttggcttctctggaaaaccc
ggatacgtcgtcgttttggaacgccagcgtcacggcccggcgagcttcac
tttcagttgaggaggtcatactggcgtccagctgcccgaaaaggcgggcg
gggaggagggttttcaaggagaccaggcacccggtttataggggtgtgag
gaggaggaacaacgacaagtgggtgtgtgagctgagagaccccaacaaca
agaaggccaggatatggctcgggacttatccgaaggctgagatggcggct
cgtgcccatgacgtcgctgcattggcgtttagggggaagcttgcctgcct
caactttgctgactcggcttggcgactgcccgtgccggcctccaacgatg
ccgcggagattaggagggtggccaacgaggcggctgaagcgtttaggaaa
gcggaggatggtggtgttgatgagaaggagagtaagggggtggtgaatga
ggagaagggttgtgtagaaatggagggaagcagcaacttgttttatttgg
acgaggaggaaatatttgagatgccaaggttgcttgatgacatggctgaa
gggcttatgctttgtccacctcagtgcttagatggctacatggattggaa
tgacgtgggaactgatgatgatttgaaactgtggagttttactatttga
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protein sequence of CBF

>KC543500.1-CBF.p1 ID=KC543500.1-CBF.p1|Name=CBF|organism=Prunus persica|type=polypeptide|length=232bp
MDLIYSQVSDLASLENPDTSSFWNASVTARRASLSVEEVILASSCPKRRA
GRRVFKETRHPVYRGVRRRNNDKWVCELRDPNNKKARIWLGTYPKAEMAA
RAHDVAALAFRGKLACLNFADSAWRLPVPASNDAAEIRRVANEAAEAFRK
AEDGGVDEKESKGVVNEEKGCVEMEGSSNLFYLDEEEIFEMPRLLDDMAE
GLMLCPPQCLDGYMDWNDVGTDDDLKLWSFTI
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mRNA from alignment at KC543500:1..699+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KC543500.1-CBF.m1 ID=KC543500.1-CBF.m1|Name=CBF|organism=Prunus persica|type=mRNA|length=699bp|location=Sequence derived from alignment at KC543500:1..699+ (Prunus persica)
atggatttgatctacagccaggtctctgatttggcttctctggaaaaccc ggatacgtcgtcgttttggaacgccagcgtcacggcccggcgagcttcac tttcagttgaggaggtcatactggcgtccagctgcccgaaaaggcgggcg gggaggagggttttcaaggagaccaggcacccggtttataggggtgtgag gaggaggaacaacgacaagtgggtgtgtgagctgagagaccccaacaaca agaaggccaggatatggctcgggacttatccgaaggctgagatggcggct cgtgcccatgacgtcgctgcattggcgtttagggggaagcttgcctgcct caactttgctgactcggcttggcgactgcccgtgccggcctccaacgatg ccgcggagattaggagggtggccaacgaggcggctgaagcgtttaggaaa gcggaggatggtggtgttgatgagaaggagagtaagggggtggtgaatga ggagaagggttgtgtagaaatggagggaagcagcaacttgttttatttgg acgaggaggaaatatttgagatgccaaggttgcttgatgacatggctgaa gggcttatgctttgtccacctcagtgcttagatggctacatggattggaa tgacgtgggaactgatgatgatttgaaactgtggagttttactatttga
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Coding sequence (CDS) from alignment at KC543500:1..699+

>KC543500.1-CBF.m1 ID=KC543500.1-CBF.m1|Name=CBF|organism=Prunus persica|type=CDS|length=699bp|location=Sequence derived from alignment at KC543500:1..699+ (Prunus persica)
atggatttgatctacagccaggtctctgatttggcttctctggaaaaccc
ggatacgtcgtcgttttggaacgccagcgtcacggcccggcgagcttcac
tttcagttgaggaggtcatactggcgtccagctgcccgaaaaggcgggcg
gggaggagggttttcaaggagaccaggcacccggtttataggggtgtgag
gaggaggaacaacgacaagtgggtgtgtgagctgagagaccccaacaaca
agaaggccaggatatggctcgggacttatccgaaggctgagatggcggct
cgtgcccatgacgtcgctgcattggcgtttagggggaagcttgcctgcct
caactttgctgactcggcttggcgactgcccgtgccggcctccaacgatg
ccgcggagattaggagggtggccaacgaggcggctgaagcgtttaggaaa
gcggaggatggtggtgttgatgagaaggagagtaagggggtggtgaatga
ggagaagggttgtgtagaaatggagggaagcagcaacttgttttatttgg
acgaggaggaaatatttgagatgccaaggttgcttgatgacatggctgaa
gggcttatgctttgtccacctcagtgcttagatggctacatggattggaa
tgacgtgggaactgatgatgatttgaaactgtggagttttactatttga
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