CBF, KC543499.1-CBF.m1 (mRNA) Prunus persica

Transcript Overview
NameCBF
Unique NameKC543499.1-CBF.m1
TypemRNA
OrganismPrunus persica (Peach)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
CBFCBFPrunus persicagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KC543499.1-CBF.m1-cds1KC543499.1-CBF.m1-cds1Prunus persicaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBFKC543499.1-CBF.p1Prunus persicapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI488468900
nuccoreKC543499.1
Alignments
Feature NameTypeLocationAnalysis
KC543499 region KC543499:1..711+ NCBI Rosaceae gene and mRNA sequences
scaffold_5 supercontig scaffold_5:10059063..10059773- Prunus persica Whole Genome v1.0 Assembly & Annotation
Properties
Property NameValue
ProductCBF/DREB 3
Sourcegenbank
Genbank noteAP2/ERF transcription factor family; low temperature response pathway
Sequences
The following sequences are available for this feature:

mRNA sequence

>KC543499.1-CBF.m1 ID=KC543499.1-CBF.m1|Name=CBF|organism=Prunus persica|type=mRNA|length=711bp
atggacttgtctcaactttccgacccggtcgaccagcccgagtcgagttc
tttgtccgacgccagcgtcacgactcagggaccttcttggtccgacgggg
acgtcatattggcttcgagcctgccaaagaagcgagccgggaggagggtt
ttcaaggagacgaggcaccctgtttataggggtgtgaggaggaggaacaa
tgacaagtgggtgtgtgaaatgagagagcccaacaagaagaagtccagga
tatggctcgggacttatccgacggcggagatggctgctcgagcccatgac
gtggcggcattggcgtttagagggaagcttgcctgcatcaattttgctga
ctccgcgtggaggctgcccttgccggcttccatggataccatggatattc
ggagagcggccgcggaggcagctgagaggtttaggccggcggagtttggt
ggaatgtgcagcggcagcagtgatgagaaggagagaatggtggtgcaggt
ggaagaggaggacaagaagggtagtgtgaacttggaaagaagcttgagct
tgtcctgttgggatgaggaggaagcgtttgacatgcccaggttgcttcac
gacatggctgaagggcttcttctttctccaccgcaacccttaggcagcga
catgaatttggatgacatgggtaccgatgctgatatcaaattgtggagtt
tctccatttaa
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protein sequence of CBF

>KC543499.1-CBF.p1 ID=KC543499.1-CBF.p1|Name=CBF|organism=Prunus persica|type=polypeptide|length=236bp
MDLSQLSDPVDQPESSSLSDASVTTQGPSWSDGDVILASSLPKKRAGRRV
FKETRHPVYRGVRRRNNDKWVCEMREPNKKKSRIWLGTYPTAEMAARAHD
VAALAFRGKLACINFADSAWRLPLPASMDTMDIRRAAAEAAERFRPAEFG
GMCSGSSDEKERMVVQVEEEDKKGSVNLERSLSLSCWDEEEAFDMPRLLH
DMAEGLLLSPPQPLGSDMNLDDMGTDADIKLWSFSI
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mRNA from alignment at KC543499:1..711+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KC543499.1-CBF.m1 ID=KC543499.1-CBF.m1|Name=CBF|organism=Prunus persica|type=mRNA|length=711bp|location=Sequence derived from alignment at KC543499:1..711+ (Prunus persica)
atggacttgtctcaactttccgacccggtcgaccagcccgagtcgagttc tttgtccgacgccagcgtcacgactcagggaccttcttggtccgacgggg acgtcatattggcttcgagcctgccaaagaagcgagccgggaggagggtt ttcaaggagacgaggcaccctgtttataggggtgtgaggaggaggaacaa tgacaagtgggtgtgtgaaatgagagagcccaacaagaagaagtccagga tatggctcgggacttatccgacggcggagatggctgctcgagcccatgac gtggcggcattggcgtttagagggaagcttgcctgcatcaattttgctga ctccgcgtggaggctgcccttgccggcttccatggataccatggatattc ggagagcggccgcggaggcagctgagaggtttaggccggcggagtttggt ggaatgtgcagcggcagcagtgatgagaaggagagaatggtggtgcaggt ggaagaggaggacaagaagggtagtgtgaacttggaaagaagcttgagct tgtcctgttgggatgaggaggaagcgtttgacatgcccaggttgcttcac gacatggctgaagggcttcttctttctccaccgcaacccttaggcagcga catgaatttggatgacatgggtaccgatgctgatatcaaattgtggagtt tctccatttaa
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Coding sequence (CDS) from alignment at KC543499:1..711+

>KC543499.1-CBF.m1 ID=KC543499.1-CBF.m1|Name=CBF|organism=Prunus persica|type=CDS|length=711bp|location=Sequence derived from alignment at KC543499:1..711+ (Prunus persica)
atggacttgtctcaactttccgacccggtcgaccagcccgagtcgagttc
tttgtccgacgccagcgtcacgactcagggaccttcttggtccgacgggg
acgtcatattggcttcgagcctgccaaagaagcgagccgggaggagggtt
ttcaaggagacgaggcaccctgtttataggggtgtgaggaggaggaacaa
tgacaagtgggtgtgtgaaatgagagagcccaacaagaagaagtccagga
tatggctcgggacttatccgacggcggagatggctgctcgagcccatgac
gtggcggcattggcgtttagagggaagcttgcctgcatcaattttgctga
ctccgcgtggaggctgcccttgccggcttccatggataccatggatattc
ggagagcggccgcggaggcagctgagaggtttaggccggcggagtttggt
ggaatgtgcagcggcagcagtgatgagaaggagagaatggtggtgcaggt
ggaagaggaggacaagaagggtagtgtgaacttggaaagaagcttgagct
tgtcctgttgggatgaggaggaagcgtttgacatgcccaggttgcttcac
gacatggctgaagggcttcttctttctccaccgcaacccttaggcagcga
catgaatttggatgacatgggtaccgatgctgatatcaaattgtggagtt
tctccatttaa
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