DREB6-1, JQ669822.1-DREB6-1.m1 (mRNA) Malus x domestica

Transcript Overview
NameDREB6-1
Unique NameJQ669822.1-DREB6-1.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
DREB6-1DREB6-1Malus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JQ669822.1-DREB6-1.m1-cds1JQ669822.1-DREB6-1.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
DREB6-1JQ669822.1-DREB6-1.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI386646588
nuccoreJQ669822.1
Alignments
Feature NameTypeLocationAnalysis
JQ669822 region JQ669822:1..1353+ NCBI Rosaceae gene and mRNA sequences
Chr09 chromosome Chr09:32316315..32317682- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr9 chromosome chr9:28032049..28033401- Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr9 chromosome chr9:31402105..31403457- Malus x domestica Whole Genome v1.0p Assembly & Annotation
Properties
Property NameValue
Productdehydration-responsive element-binding protein (DREB6)
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>JQ669822.1-DREB6-1.m1 ID=JQ669822.1-DREB6-1.m1|Name=DREB6-1|organism=Malus x domestica|type=mRNA|length=1353bp
atgtcttcaccaaaaaagagtggtaagtctaagatggagacaagcggaga
atgggaggcgaacaaagacaaggagcttgatttttccttcgagagaccgc
catggaagcccggttttagtgaggcttcaacggcgtcgaataggcctctc
aagaaagtcaagagccctgaaaggcaagacccaattcaagcttcaccttc
tttagatcatcatcaaacaccttcgccaatcattgctccccatccatctt
attcctcttcaaaaatagtgtttcctttttctttcgacgggtctcaacag
cctatgatgcaattcccccaccagttcaaccccacaaatttgcctatgtt
tccctcacccattcaacagcaactgcaacaaaatcctcagcaaatgattt
cttttgaatcccagcagcagcagccgcagcagcagcaggggatgagttat
ccactgccgtttgtcggagagtcggtgagttggcagcagcaccagaaaat
gcttcagcattggagtgacgctttaaatttgagtccaagagggagggtga
tgatgaacaggttgggaccagatggcaggccaatgtttcgacccccggca
atgccttataatactacaaaactttacagtggagtgaggcaacggcattg
gcgcaaatgggtagctgaaatccgccttcctcgaaacaggactcgcctct
ggcttggcaccttcgacacagctgaagatgccgccatggcttacgaccgc
gaggccttcaagttgagaggagagaatgccaggctcaatttccctgagct
ttttctcaacaaagacaaatcagatgtttcagtttcatcagctccgagtt
cagctgctacttcgcctccaaggcatgagggttcaaaaccaaccaggaac
cgcaagcaacctcaaaaaatcaagagcagcgcttcgaatatagaggcaat
gccaccgccaccaattccacatacccaagaagagaatagtcctgacaatg
attcaggactggagtcgaacgaggctaaagcgattgacgaagttgaggtg
aatatcgatggtgctggaggagggagttcacagcaaaaggaaattgtttg
gggggatatggcagaagattggcttaatgcaattcctgcaggttggggtc
caggtagtcctgtgtgggatgatttggacaacaatcttttgctgcaatca
catctcccttttaccaatccaaaccagcaggactataacattaacattaa
tcctcaacaagcgattcagaattcaggttcgggttcgggatctggttcct
cttcttcctcttcatatcccacgaagaacctcttttggaaggaccaggat
tga
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protein sequence of DREB6-1

>JQ669822.1-DREB6-1.p1 ID=JQ669822.1-DREB6-1.p1|Name=DREB6-1|organism=Malus x domestica|type=polypeptide|length=450bp
MSSPKKSGKSKMETSGEWEANKDKELDFSFERPPWKPGFSEASTASNRPL
KKVKSPERQDPIQASPSLDHHQTPSPIIAPHPSYSSSKIVFPFSFDGSQQ
PMMQFPHQFNPTNLPMFPSPIQQQLQQNPQQMISFESQQQQPQQQQGMSY
PLPFVGESVSWQQHQKMLQHWSDALNLSPRGRVMMNRLGPDGRPMFRPPA
MPYNTTKLYSGVRQRHWRKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDR
EAFKLRGENARLNFPELFLNKDKSDVSVSSAPSSAATSPPRHEGSKPTRN
RKQPQKIKSSASNIEAMPPPPIPHTQEENSPDNDSGLESNEAKAIDEVEV
NIDGAGGGSSQQKEIVWGDMAEDWLNAIPAGWGPGSPVWDDLDNNLLLQS
HLPFTNPNQQDYNININPQQAIQNSGSGSGSGSSSSSSYPTKNLFWKDQD
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mRNA from alignment at JQ669822:1..1353+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JQ669822.1-DREB6-1.m1 ID=JQ669822.1-DREB6-1.m1|Name=DREB6-1|organism=Malus x domestica|type=mRNA|length=1353bp|location=Sequence derived from alignment at JQ669822:1..1353+ (Malus x domestica)
atgtcttcaccaaaaaagagtggtaagtctaagatggagacaagcggaga atgggaggcgaacaaagacaaggagcttgatttttccttcgagagaccgc catggaagcccggttttagtgaggcttcaacggcgtcgaataggcctctc aagaaagtcaagagccctgaaaggcaagacccaattcaagcttcaccttc tttagatcatcatcaaacaccttcgccaatcattgctccccatccatctt attcctcttcaaaaatagtgtttcctttttctttcgacgggtctcaacag cctatgatgcaattcccccaccagttcaaccccacaaatttgcctatgtt tccctcacccattcaacagcaactgcaacaaaatcctcagcaaatgattt cttttgaatcccagcagcagcagccgcagcagcagcaggggatgagttat ccactgccgtttgtcggagagtcggtgagttggcagcagcaccagaaaat gcttcagcattggagtgacgctttaaatttgagtccaagagggagggtga tgatgaacaggttgggaccagatggcaggccaatgtttcgacccccggca atgccttataatactacaaaactttacagtggagtgaggcaacggcattg gcgcaaatgggtagctgaaatccgccttcctcgaaacaggactcgcctct ggcttggcaccttcgacacagctgaagatgccgccatggcttacgaccgc gaggccttcaagttgagaggagagaatgccaggctcaatttccctgagct ttttctcaacaaagacaaatcagatgtttcagtttcatcagctccgagtt cagctgctacttcgcctccaaggcatgagggttcaaaaccaaccaggaac cgcaagcaacctcaaaaaatcaagagcagcgcttcgaatatagaggcaat gccaccgccaccaattccacatacccaagaagagaatagtcctgacaatg attcaggactggagtcgaacgaggctaaagcgattgacgaagttgaggtg aatatcgatggtgctggaggagggagttcacagcaaaaggaaattgtttg gggggatatggcagaagattggcttaatgcaattcctgcaggttggggtc caggtagtcctgtgtgggatgatttggacaacaatcttttgctgcaatca catctcccttttaccaatccaaaccagcaggactataacattaacattaa tcctcaacaagcgattcagaattcaggttcgggttcgggatctggttcct cttcttcctcttcatatcccacgaagaacctcttttggaaggaccaggat tga
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Coding sequence (CDS) from alignment at JQ669822:1..1353+

>JQ669822.1-DREB6-1.m1 ID=JQ669822.1-DREB6-1.m1|Name=DREB6-1|organism=Malus x domestica|type=CDS|length=1353bp|location=Sequence derived from alignment at JQ669822:1..1353+ (Malus x domestica)
atgtcttcaccaaaaaagagtggtaagtctaagatggagacaagcggaga
atgggaggcgaacaaagacaaggagcttgatttttccttcgagagaccgc
catggaagcccggttttagtgaggcttcaacggcgtcgaataggcctctc
aagaaagtcaagagccctgaaaggcaagacccaattcaagcttcaccttc
tttagatcatcatcaaacaccttcgccaatcattgctccccatccatctt
attcctcttcaaaaatagtgtttcctttttctttcgacgggtctcaacag
cctatgatgcaattcccccaccagttcaaccccacaaatttgcctatgtt
tccctcacccattcaacagcaactgcaacaaaatcctcagcaaatgattt
cttttgaatcccagcagcagcagccgcagcagcagcaggggatgagttat
ccactgccgtttgtcggagagtcggtgagttggcagcagcaccagaaaat
gcttcagcattggagtgacgctttaaatttgagtccaagagggagggtga
tgatgaacaggttgggaccagatggcaggccaatgtttcgacccccggca
atgccttataatactacaaaactttacagtggagtgaggcaacggcattg
gcgcaaatgggtagctgaaatccgccttcctcgaaacaggactcgcctct
ggcttggcaccttcgacacagctgaagatgccgccatggcttacgaccgc
gaggccttcaagttgagaggagagaatgccaggctcaatttccctgagct
ttttctcaacaaagacaaatcagatgtttcagtttcatcagctccgagtt
cagctgctacttcgcctccaaggcatgagggttcaaaaccaaccaggaac
cgcaagcaacctcaaaaaatcaagagcagcgcttcgaatatagaggcaat
gccaccgccaccaattccacatacccaagaagagaatagtcctgacaatg
attcaggactggagtcgaacgaggctaaagcgattgacgaagttgaggtg
aatatcgatggtgctggaggagggagttcacagcaaaaggaaattgtttg
gggggatatggcagaagattggcttaatgcaattcctgcaggttggggtc
caggtagtcctgtgtgggatgatttggacaacaatcttttgctgcaatca
catctcccttttaccaatccaaaccagcaggactataacattaacattaa
tcctcaacaagcgattcagaattcaggttcgggttcgggatctggttcct
cttcttcctcttcatatcccacgaagaacctcttttggaaggaccaggat
tga
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