DREB2-4, JQ669819.1-DREB2-4.m1 (mRNA) Malus x domestica

Transcript Overview
NameDREB2-4
Unique NameJQ669819.1-DREB2-4.m1
TypemRNA
OrganismMalus x domestica (Apple)
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
NCBI Rosaceae gene and mRNA sequences2014-12-31
Relationships

This mRNA is associated with the following gene feature(s):

Feature NameUnique NameSpeciesType
DREB2-4DREB2-4Malus x domesticagene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
JQ669819.1-DREB2-4.m1-cds1JQ669819.1-DREB2-4.m1-cds1Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
DREB2-4JQ669819.1-DREB2-4.p1Malus x domesticapolypeptide


Cross References
External references for this mRNA
DatabaseAccession
GI386646582
nuccoreJQ669819.1
Alignments
Feature NameTypeLocationAnalysis
JQ669819 region JQ669819:1..1476+ NCBI Rosaceae gene and mRNA sequences
Chr04 chromosome Chr04:25592876..25596077- Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
chr4 chromosome chr4:16514923..16518124+ Malus x domestica Whole Genome v1.0 Assembly & Annotation
chr4 chromosome chr4:18683820..18687021- Malus x domestica Whole Genome v1.0p Assembly & Annotation
Properties
Property NameValue
Productdehydration-responsive element-binding protein (DREB2)
Sourcegenbank
Sequences
The following sequences are available for this feature:

mRNA sequence

>JQ669819.1-DREB2-4.m1 ID=JQ669819.1-DREB2-4.m1|Name=DREB2-4|organism=Malus x domestica|type=mRNA|length=1476bp
atggagtccgaggcttcggacggggaaaggaaattgcggaagaggcgcaa
cgggtgcgaatcgatagaggacacactgaccaagtggaagaactacaatg
agaggcttgattctgggaaagatggagggaagaagactcgggctccggcg
aagggctccagaaaaggctgcatgagggggaaaggagggccggagaactc
agattgtgtatttaggggtgttaggcagaggacttggggaaaatgggtgg
cggaaattcgagaaccaattcgagctagagccggttctgtacctacgaag
aagaataggcgtctttggcttggtactttccctacagcctatgaagctgc
tcttgcttatgataaagctgctagagcaatttatggtgctttggcccggc
tcaacttccccgacaatgctgtggactcgaaggactactactctaattct
gtgtcatctaaaacaccatcgtcgcatgagtcctcattgacatacaataa
tgcggatgaggcagggggaagatcaggattctttgaggattgtgtggcca
aagagcaaaagcaggaaacggattgttctgtatcagaggaattacatgtt
ttacgtgctacctcaagagaaccaaaagctgtgaaatgtgaatacgaaac
tgaacgtgagcttgttaagaacgatgatgtttttcagaccgagagctatg
gaagcttcgatcataggggagattacttgcctaatgagcccctggttgtg
aattttgatacggtatttgattgtaagccttgtaacgatatggatccttt
ggagaaacttttgaggtccaattatgattacttaactgagcttgtagatg
gggaatgcaatcggagaaacagttgcaagccttcaaatgatgtcaaagtt
gagacaccggcaatgagggaagccgcggagaaaccatttccggtgattct
ggaatccggaagtcacaacgggttagatgagaagtacaacaacatacatg
gtgagcaaataaacgcggccgaaattcttgtaaccaattttgagccttct
gaggatgttgaaatgaagttatcgatgacgaatcaagaattgcaaggagg
atttgcagaaacaacgagattagatggccataattgcaatggcttcatac
atagttatgcttgtttagatgatttagatgtggcatacggtccgagatat
ggcattaatccttggaatgatatcggaatgcagacagagctcgacgacag
acttgactacgtgcataactggtctgcagaggaaacctatggcattgatg
ctgctgaggaccaacaatgggggaggacgcataatctccctattcagttg
cagacacaaccacatcccgacatacctggaagctcgaatcacacggagta
cgcacatttaggcgtggatatcgatcgacaaagttacgattctggtgcaa
tggaagagcaggggctgcctaaatga
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protein sequence of DREB2-4

>JQ669819.1-DREB2-4.p1 ID=JQ669819.1-DREB2-4.p1|Name=DREB2-4|organism=Malus x domestica|type=polypeptide|length=491bp
MESEASDGERKLRKRRNGCESIEDTLTKWKNYNERLDSGKDGGKKTRAPA
KGSRKGCMRGKGGPENSDCVFRGVRQRTWGKWVAEIREPIRARAGSVPTK
KNRRLWLGTFPTAYEAALAYDKAARAIYGALARLNFPDNAVDSKDYYSNS
VSSKTPSSHESSLTYNNADEAGGRSGFFEDCVAKEQKQETDCSVSEELHV
LRATSREPKAVKCEYETERELVKNDDVFQTESYGSFDHRGDYLPNEPLVV
NFDTVFDCKPCNDMDPLEKLLRSNYDYLTELVDGECNRRNSCKPSNDVKV
ETPAMREAAEKPFPVILESGSHNGLDEKYNNIHGEQINAAEILVTNFEPS
EDVEMKLSMTNQELQGGFAETTRLDGHNCNGFIHSYACLDDLDVAYGPRY
GINPWNDIGMQTELDDRLDYVHNWSAEETYGIDAAEDQQWGRTHNLPIQL
QTQPHPDIPGSSNHTEYAHLGVDIDRQSYDSGAMEEQGLPK
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mRNA from alignment at JQ669819:1..1476+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>JQ669819.1-DREB2-4.m1 ID=JQ669819.1-DREB2-4.m1|Name=DREB2-4|organism=Malus x domestica|type=mRNA|length=1476bp|location=Sequence derived from alignment at JQ669819:1..1476+ (Malus x domestica)
atggagtccgaggcttcggacggggaaaggaaattgcggaagaggcgcaa cgggtgcgaatcgatagaggacacactgaccaagtggaagaactacaatg agaggcttgattctgggaaagatggagggaagaagactcgggctccggcg aagggctccagaaaaggctgcatgagggggaaaggagggccggagaactc agattgtgtatttaggggtgttaggcagaggacttggggaaaatgggtgg cggaaattcgagaaccaattcgagctagagccggttctgtacctacgaag aagaataggcgtctttggcttggtactttccctacagcctatgaagctgc tcttgcttatgataaagctgctagagcaatttatggtgctttggcccggc tcaacttccccgacaatgctgtggactcgaaggactactactctaattct gtgtcatctaaaacaccatcgtcgcatgagtcctcattgacatacaataa tgcggatgaggcagggggaagatcaggattctttgaggattgtgtggcca aagagcaaaagcaggaaacggattgttctgtatcagaggaattacatgtt ttacgtgctacctcaagagaaccaaaagctgtgaaatgtgaatacgaaac tgaacgtgagcttgttaagaacgatgatgtttttcagaccgagagctatg gaagcttcgatcataggggagattacttgcctaatgagcccctggttgtg aattttgatacggtatttgattgtaagccttgtaacgatatggatccttt ggagaaacttttgaggtccaattatgattacttaactgagcttgtagatg gggaatgcaatcggagaaacagttgcaagccttcaaatgatgtcaaagtt gagacaccggcaatgagggaagccgcggagaaaccatttccggtgattct ggaatccggaagtcacaacgggttagatgagaagtacaacaacatacatg gtgagcaaataaacgcggccgaaattcttgtaaccaattttgagccttct gaggatgttgaaatgaagttatcgatgacgaatcaagaattgcaaggagg atttgcagaaacaacgagattagatggccataattgcaatggcttcatac atagttatgcttgtttagatgatttagatgtggcatacggtccgagatat ggcattaatccttggaatgatatcggaatgcagacagagctcgacgacag acttgactacgtgcataactggtctgcagaggaaacctatggcattgatg ctgctgaggaccaacaatgggggaggacgcataatctccctattcagttg cagacacaaccacatcccgacatacctggaagctcgaatcacacggagta cgcacatttaggcgtggatatcgatcgacaaagttacgattctggtgcaa tggaagagcaggggctgcctaaatga
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Coding sequence (CDS) from alignment at JQ669819:1..1476+

>JQ669819.1-DREB2-4.m1 ID=JQ669819.1-DREB2-4.m1|Name=DREB2-4|organism=Malus x domestica|type=CDS|length=1476bp|location=Sequence derived from alignment at JQ669819:1..1476+ (Malus x domestica)
atggagtccgaggcttcggacggggaaaggaaattgcggaagaggcgcaa
cgggtgcgaatcgatagaggacacactgaccaagtggaagaactacaatg
agaggcttgattctgggaaagatggagggaagaagactcgggctccggcg
aagggctccagaaaaggctgcatgagggggaaaggagggccggagaactc
agattgtgtatttaggggtgttaggcagaggacttggggaaaatgggtgg
cggaaattcgagaaccaattcgagctagagccggttctgtacctacgaag
aagaataggcgtctttggcttggtactttccctacagcctatgaagctgc
tcttgcttatgataaagctgctagagcaatttatggtgctttggcccggc
tcaacttccccgacaatgctgtggactcgaaggactactactctaattct
gtgtcatctaaaacaccatcgtcgcatgagtcctcattgacatacaataa
tgcggatgaggcagggggaagatcaggattctttgaggattgtgtggcca
aagagcaaaagcaggaaacggattgttctgtatcagaggaattacatgtt
ttacgtgctacctcaagagaaccaaaagctgtgaaatgtgaatacgaaac
tgaacgtgagcttgttaagaacgatgatgtttttcagaccgagagctatg
gaagcttcgatcataggggagattacttgcctaatgagcccctggttgtg
aattttgatacggtatttgattgtaagccttgtaacgatatggatccttt
ggagaaacttttgaggtccaattatgattacttaactgagcttgtagatg
gggaatgcaatcggagaaacagttgcaagccttcaaatgatgtcaaagtt
gagacaccggcaatgagggaagccgcggagaaaccatttccggtgattct
ggaatccggaagtcacaacgggttagatgagaagtacaacaacatacatg
gtgagcaaataaacgcggccgaaattcttgtaaccaattttgagccttct
gaggatgttgaaatgaagttatcgatgacgaatcaagaattgcaaggagg
atttgcagaaacaacgagattagatggccataattgcaatggcttcatac
atagttatgcttgtttagatgatttagatgtggcatacggtccgagatat
ggcattaatccttggaatgatatcggaatgcagacagagctcgacgacag
acttgactacgtgcataactggtctgcagaggaaacctatggcattgatg
ctgctgaggaccaacaatgggggaggacgcataatctccctattcagttg
cagacacaaccacatcccgacatacctggaagctcgaatcacacggagta
cgcacatttaggcgtggatatcgatcgacaaagttacgattctggtgcaa
tggaagagcaggggctgcctaaatga
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